RNA–Protein interactions for RNA: ENST00000470167.1

COL3A1-205, Transcript of collagen type III alpha 1 chain, humanhuman

TSL 2

Gene COL3A1, Length 628 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL3A1-205ENST00000470167 LRRC23Q53EV4 343 aaPredicted RBP5.75□□□□□ -1.49
COL3A1-205ENST00000470167 SLC27A3Q5K4L6 730 aa5.75□□□□□ -1.49
COL3A1-205ENST00000470167 WLSQ5T9L3 541 aa5.75□□□□□ -1.49
COL3A1-205ENST00000470167 VPS53Q5VIR6 699 aa5.75□□□□□ -1.49
COL3A1-205ENST00000470167 CWF19L1Q69YN2 538 aaKnown RBP5.75□□□□□ -1.49
COL3A1-205ENST00000470167 NXNQ6DKJ4 435 aa5.75□□□□□ -1.49
COL3A1-205ENST00000470167 THOC7Q6I9Y2 204 aaKnown RBP5.75□□□□□ -1.49
COL3A1-205ENST00000470167 CAPRIN2Q6IMN6 1127 aaKnown RBP5.75□□□□□ -1.49
COL3A1-205ENST00000470167 ATCAYQ86WG3 371 aa5.75□□□□□ -1.49
COL3A1-205ENST00000470167 CEP57L1Q8IYX8 460 aa5.75□□□□□ -1.49
COL3A1-205ENST00000470167 RGL4Q8IZJ4 473 aa5.75□□□□□ -1.49
COL3A1-205ENST00000470167 LSMEM2Q8N112 164 aa5.75□□□□□ -1.49
COL3A1-205ENST00000470167 LINC00528Q8N1L1 170 aa5.75□□□□□ -1.49
COL3A1-205ENST00000470167 LRRC43Q8N309 656 aa5.75□□□□□ -1.49
COL3A1-205ENST00000470167 ZNF713Q8N859 430 aaPredicted RBP5.75□□□□□ -1.49
COL3A1-205ENST00000470167 MAB21L3Q8N8X9 362 aa5.75□□□□□ -1.49
COL3A1-205ENST00000470167 ZNF397Q8NF99 534 aaPredicted RBP5.75□□□□□ -1.49
COL3A1-205ENST00000470167 FLCNQ8NFG4 579 aa5.75□□□□□ -1.49
COL3A1-205ENST00000470167 TNIP2Q8NFZ5 429 aa5.75□□□□□ -1.49
COL3A1-205ENST00000470167 SGCDQ92629 289 aa5.75□□□□□ -1.49
COL3A1-205ENST00000470167 PPP2R3CQ969Q6 453 aa5.75□□□□□ -1.49
COL3A1-205ENST00000470167 PPP1R14BQ96C90 147 aa5.75□□□□□ -1.49
COL3A1-205ENST00000470167 CCDC114Q96M63 670 aa5.75□□□□□ -1.49
COL3A1-205ENST00000470167 NELL2Q99435 816 aa5.75□□□□□ -1.49
COL3A1-205ENST00000470167 EIF3CQ99613 913 aaKnown RBP5.75□□□□□ -1.49
COL3A1-205ENST00000470167 HAUS7Q99871 368 aa5.75□□□□□ -1.49
COL3A1-205ENST00000470167 NIFKQ9BYG3 293 aaKnown RBP5.75□□□□□ -1.49
COL3A1-205ENST00000470167 UPF3BQ9BZI7 483 aaKnown RBP5.75□□□□□ -1.49
COL3A1-205ENST00000470167 TRIM4Q9C037 500 aa5.75□□□□□ -1.49
COL3A1-205ENST00000470167 DDX24Q9GZR7 859 aaKnown RBP eCLIP5.75□□□□□ -1.49
COL3A1-205ENST00000470167 POLMQ9NP87 494 aaPredicted RBP5.75□□□□□ -1.49
COL3A1-205ENST00000470167 SH3GLB2Q9NR46 395 aa5.75□□□□□ -1.49
COL3A1-205ENST00000470167 ENAMQ9NRM1 1142 aa5.75□□□□□ -1.49
COL3A1-205ENST00000470167 TYW1Q9NV66 732 aaKnown RBP5.75□□□□□ -1.49
COL3A1-205ENST00000470167 CCDC87Q9NVE4 849 aa5.75□□□□□ -1.49
COL3A1-205ENST00000470167 PIH1D1Q9NWS0 290 aaKnown RBP5.75□□□□□ -1.49
COL3A1-205ENST00000470167 AIPL1Q9NZN9 384 aa5.75□□□□□ -1.49
COL3A1-205ENST00000470167 KLK14Q9P0G3 267 aa5.75□□□□□ -1.49
COL3A1-205ENST00000470167 STAP2Q9UGK3 403 aa5.75□□□□□ -1.49
COL3A1-205ENST00000470167 DMGDHQ9UI17 866 aaKnown RBP5.75□□□□□ -1.49
COL3A1-205ENST00000470167 CCPG1Q9ULG6 757 aa5.75□□□□□ -1.49
COL3A1-205ENST00000470167 MRPL11Q9Y3B7 192 aaKnown RBP5.75□□□□□ -1.49
COL3A1-205ENST00000470167 RPAP1Q9BWH6 1393 aaPredicted RBP5.75□□□□□ -1.49
COL3A1-205ENST00000470167 GAKO14976 1311 aa5.74□□□□□ -1.49
COL3A1-205ENST00000470167 NCOA3Q9Y6Q9 1424 aa5.74□□□□□ -1.49
COL3A1-205ENST00000470167 GOLGA6L4A6NEF3 574 aa5.74□□□□□ -1.49
COL3A1-205ENST00000470167 SMTNL1A8MU46 457 aa5.74□□□□□ -1.49
COL3A1-205ENST00000470167 ZBTB39O15060 712 aa5.74□□□□□ -1.49
COL3A1-205ENST00000470167 CAPN5O15484 640 aaPredicted RBP5.74□□□□□ -1.49
COL3A1-205ENST00000470167 NDUFB5O43674 189 aa5.74□□□□□ -1.49
COL3A1-205ENST00000470167 ZEB2O60315 1214 aa5.74□□□□□ -1.49
COL3A1-205ENST00000470167 FZD6O60353 706 aa5.74□□□□□ -1.49
COL3A1-205ENST00000470167 MBD4O95243 580 aa5.74□□□□□ -1.49
COL3A1-205ENST00000470167 ARIH2O95376 493 aa5.74□□□□□ -1.49
COL3A1-205ENST00000470167 BCRP11274 1271 aa5.74□□□□□ -1.49
COL3A1-205ENST00000470167 ATP5JP18859 108 aa5.74□□□□□ -1.49
COL3A1-205ENST00000470167 HSPA4P34932 840 aa5.74□□□□□ -1.49
COL3A1-205ENST00000470167 CTSOP43234 321 aaPredicted RBP5.74□□□□□ -1.49
COL3A1-205ENST00000470167 FNTAP49354 379 aa5.74□□□□□ -1.49
COL3A1-205ENST00000470167 HSD17B7P56937 341 aa5.74□□□□□ -1.49
COL3A1-205ENST00000470167 ROR2Q01974 943 aaKnown RBP5.74□□□□□ -1.49
COL3A1-205ENST00000470167 NUCB1Q02818 461 aa5.74□□□□□ -1.49
COL3A1-205ENST00000470167 SP140Q13342 867 aa5.74□□□□□ -1.49
COL3A1-205ENST00000470167 DPYSQ14117 519 aa5.74□□□□□ -1.49
COL3A1-205ENST00000470167 RTN1Q16799 776 aa5.74□□□□□ -1.49
COL3A1-205ENST00000470167 C4orf17Q53FE4 359 aa5.74□□□□□ -1.49
COL3A1-205ENST00000470167 HYIQ5T013 277 aa5.74□□□□□ -1.49
COL3A1-205ENST00000470167 SPATA1Q5VX52 437 aa5.74□□□□□ -1.49
COL3A1-205ENST00000470167 ISM2Q6H9L7 571 aa5.74□□□□□ -1.49
COL3A1-205ENST00000470167 TMC7Q7Z402 723 aa5.74□□□□□ -1.49
COL3A1-205ENST00000470167 TADA2BQ86TJ2 420 aa5.74□□□□□ -1.49
COL3A1-205ENST00000470167 CEP57Q86XR8 500 aa5.74□□□□□ -1.49
COL3A1-205ENST00000470167 RAB11FIP4Q86YS3 637 aa5.74□□□□□ -1.49
COL3A1-205ENST00000470167 WDR63Q8IWG1 891 aa5.74□□□□□ -1.49
COL3A1-205ENST00000470167 ZSCAN29Q8IWY8 852 aaPredicted RBP5.74□□□□□ -1.49
COL3A1-205ENST00000470167 CCDC170Q8IYT3 715 aa5.74□□□□□ -1.49
COL3A1-205ENST00000470167 VPS52Q8N1B4 723 aa5.74□□□□□ -1.49
COL3A1-205ENST00000470167 SPERTQ8NA61 448 aa5.74□□□□□ -1.49
COL3A1-205ENST00000470167 ARHGEF2Q92974 986 aaKnown RBP5.74□□□□□ -1.49
COL3A1-205ENST00000470167 ARMC5Q96C12 935 aa5.74□□□□□ -1.49
COL3A1-205ENST00000470167 GCC1Q96CN9 775 aa5.74□□□□□ -1.49
COL3A1-205ENST00000470167 RBM41Q96IZ5 413 aaKnown RBP5.74□□□□□ -1.49
COL3A1-205ENST00000470167 ALS2CR12Q96Q35 445 aa5.74□□□□□ -1.49
COL3A1-205ENST00000470167 TSEN34Q9BSV6 310 aaKnown RBP5.74□□□□□ -1.49
COL3A1-205ENST00000470167 GRIP2Q9C0E4 1043 aa5.74□□□□□ -1.49
COL3A1-205ENST00000470167 TTC12Q9H892 705 aaPredicted RBP5.74□□□□□ -1.49
COL3A1-205ENST00000470167 KIF9Q9HAQ2 790 aa5.74□□□□□ -1.49
COL3A1-205ENST00000470167 PCDH18Q9HCL0 1135 aa5.74□□□□□ -1.49
COL3A1-205ENST00000470167 GPR108Q9NPR9 543 aa5.74□□□□□ -1.49
COL3A1-205ENST00000470167 TCP11L1Q9NUJ3 509 aa5.74□□□□□ -1.49
COL3A1-205ENST00000470167 PPP1R9AQ9ULJ8 1098 aa5.74□□□□□ -1.49
COL3A1-205ENST00000470167 MYO6Q9UM54 1294 aa5.74□□□□□ -1.49
COL3A1-205ENST00000470167 PA2G4Q9UQ80 394 aaKnown RBP5.74□□□□□ -1.49
COL3A1-205ENST00000470167 CNPY2Q9Y2B0 182 aa5.74□□□□□ -1.49
COL3A1-205ENST00000470167 TIMM22Q9Y584 194 aa5.74□□□□□ -1.49
COL3A1-205ENST00000470167 PCDHGC5Q9Y5F6 944 aa5.74□□□□□ -1.49
COL3A1-205ENST00000470167 MRFAP1Q9Y605 127 aa5.74□□□□□ -1.49
COL3A1-205ENST00000470167 WRNQ14191 1432 aaPredicted RBP eCLIP5.74□□□□□ -1.49
COL3A1-205ENST00000470167 RB1CC1Q8TDY2 1594 aa5.73□□□□□ -1.49
COL3A1-205ENST00000470167 FAM170AA1A519 330 aa5.73□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms