RNA–Protein interactions for RNA: ENST00000470117.2

USP30-205, Transcript of ubiquitin specific peptidase 30, humanhuman

TSL 5

Gene USP30, Length 615 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP30-205ENST00000470117 FAM161BQ96MY7 647 aa11.04□□□□□ -0.64
USP30-205ENST00000470117 TMEM47Q9BQJ4 181 aa11.04□□□□□ -0.64
USP30-205ENST00000470117 UPF3AQ9H1J1 476 aaKnown RBP11.04□□□□□ -0.64
USP30-205ENST00000470117 GPCPD1Q9NPB8 672 aa11.04□□□□□ -0.64
USP30-205ENST00000470117 DIAPH3Q9NSV4 1193 aa11.04□□□□□ -0.64
USP30-205ENST00000470117 MTMR10Q9NXD2 777 aa11.04□□□□□ -0.64
USP30-205ENST00000470117 STXBP5LQ9Y2K9 1186 aa11.04□□□□□ -0.64
USP30-205ENST00000470117 LAMA4Q16363 1823 aa11.04□□□□□ -0.64
USP30-205ENST00000470117 MROH7Q68CQ1 1323 aa11.04□□□□□ -0.64
USP30-205ENST00000470117 KIAA0355O15063 1070 aa11.03□□□□□ -0.64
USP30-205ENST00000470117 ICAM1P05362 532 aa11.03□□□□□ -0.64
USP30-205ENST00000470117 ASGR1P07306 291 aa11.03□□□□□ -0.64
USP30-205ENST00000470117 FGRP09769 529 aa11.03□□□□□ -0.64
USP30-205ENST00000470117 PCP11498 1178 aaKnown RBP11.03□□□□□ -0.64
USP30-205ENST00000470117 SDSP20132 328 aa11.03□□□□□ -0.64
USP30-205ENST00000470117 ITGB8P26012 769 aa11.03□□□□□ -0.64
USP30-205ENST00000470117 GJA9P57773 515 aa11.03□□□□□ -0.64
USP30-205ENST00000470117 TNFAIP2Q03169 654 aa11.03□□□□□ -0.64
USP30-205ENST00000470117 FPGSQ05932 587 aa11.03□□□□□ -0.64
USP30-205ENST00000470117 GNASQ5JWF2 1037 aa11.03□□□□□ -0.64
USP30-205ENST00000470117 AKNAD1Q5T1N1 836 aa11.03□□□□□ -0.64
USP30-205ENST00000470117 CCSAPQ6IQ19 270 aaPredicted RBP11.03□□□□□ -0.64
USP30-205ENST00000470117 EEPD1Q7L9B9 569 aa11.03□□□□□ -0.64
USP30-205ENST00000470117 TLK2Q86UE8 772 aa11.03□□□□□ -0.64
USP30-205ENST00000470117 FBXO16Q8IX29 292 aaPredicted RBP11.03□□□□□ -0.64
USP30-205ENST00000470117 EXOC6Q8TAG9 804 aa11.03□□□□□ -0.64
USP30-205ENST00000470117 KATNBL1Q9H079 304 aa11.03□□□□□ -0.64
USP30-205ENST00000470117 RANBP17Q9H2T7 1088 aaKnown RBP11.03□□□□□ -0.64
USP30-205ENST00000470117 RNF41Q9H4P4 317 aaPredicted RBP11.03□□□□□ -0.64
USP30-205ENST00000470117 DDX49Q9Y6V7 483 aaKnown RBP11.03□□□□□ -0.64
USP30-205ENST00000470117 NEDD4P46934 1319 aa11.03□□□□□ -0.64
USP30-205ENST00000470117 SZT2Q5T011 3432 aa11.02□□□□□ -0.64
USP30-205ENST00000470117 A0A0U1RQG5 324 aaPredicted RBP11.02□□□□□ -0.65
USP30-205ENST00000470117 C11orf97A0A1B0GVM6 126 aaPredicted RBP11.02□□□□□ -0.65
USP30-205ENST00000470117 TLR3O15455 904 aaKnown RBP11.02□□□□□ -0.65
USP30-205ENST00000470117 PDHBP11177 359 aa11.02□□□□□ -0.65
USP30-205ENST00000470117 NOVP48745 357 aa11.02□□□□□ -0.65
USP30-205ENST00000470117 BEX3Q00994 111 aa11.02□□□□□ -0.65
USP30-205ENST00000470117 NUCB1Q02818 461 aa11.02□□□□□ -0.65
USP30-205ENST00000470117 FAAP100Q0VG06 881 aa11.02□□□□□ -0.65
USP30-205ENST00000470117 ANKRD33Q7Z3H0 272 aa11.02□□□□□ -0.65
USP30-205ENST00000470117 PLEKHM2Q8IWE5 1019 aa11.02□□□□□ -0.65
USP30-205ENST00000470117 ESR2Q92731 530 aa11.02□□□□□ -0.65
USP30-205ENST00000470117 TOX2Q96NM4 488 aa11.02□□□□□ -0.65
USP30-205ENST00000470117 AP5M1Q9H0R1 490 aa11.02□□□□□ -0.65
USP30-205ENST00000470117 TCP11L1Q9NUJ3 509 aa11.02□□□□□ -0.65
USP30-205ENST00000470117 CYP39A1Q9NYL5 469 aa11.02□□□□□ -0.65
USP30-205ENST00000470117 ASTN1O14525 1302 aa11.02□□□□□ -0.65
USP30-205ENST00000470117 ELP1O95163 1332 aa11.02□□□□□ -0.65
USP30-205ENST00000470117 LCTP09848 1927 aa11.01□□□□□ -0.65
USP30-205ENST00000470117 LAMA3Q16787 3333 aa11.01□□□□□ -0.65
USP30-205ENST00000470117 PTPDC1A2A3K4 754 aa11.01□□□□□ -0.65
USP30-205ENST00000470117 NFIBO00712 420 aa11.01□□□□□ -0.65
USP30-205ENST00000470117 ZNF213O14771 459 aa11.01□□□□□ -0.65
USP30-205ENST00000470117 IGHDP01880 384 aa11.01□□□□□ -0.65
USP30-205ENST00000470117 EPHB4P54760 987 aa11.01□□□□□ -0.65
USP30-205ENST00000470117 FAM109BQ6ICB4 259 aaPredicted RBP11.01□□□□□ -0.65
USP30-205ENST00000470117 CWC27Q6UX04 472 aaKnown RBP11.01□□□□□ -0.65
USP30-205ENST00000470117 CXCL17Q6UXB2 119 aa11.01□□□□□ -0.65
USP30-205ENST00000470117 BTNL9Q6UXG8 535 aa11.01□□□□□ -0.65
USP30-205ENST00000470117 SLC30A10Q6XR72 485 aa11.01□□□□□ -0.65
USP30-205ENST00000470117 GUCD1Q96NT3 240 aa11.01□□□□□ -0.65
USP30-205ENST00000470117 PURBQ96QR8 312 aaKnown RBP11.01□□□□□ -0.65
USP30-205ENST00000470117 ZKSCAN3Q9BRR0 538 aa11.01□□□□□ -0.65
USP30-205ENST00000470117 VTA1Q9NP79 307 aa11.01□□□□□ -0.65
USP30-205ENST00000470117 ADD3Q9UEY8 706 aaKnown RBP11.01□□□□□ -0.65
USP30-205ENST00000470117 TBX21Q9UL17 535 aa11.01□□□□□ -0.65
USP30-205ENST00000470117 ARVCFO00192 962 aa11□□□□□ -0.65
USP30-205ENST00000470117 HIP1O00291 1037 aa11□□□□□ -0.65
USP30-205ENST00000470117 SMPD1P17405 629 aa11□□□□□ -0.65
USP30-205ENST00000470117 PTGS1P23219 599 aa11□□□□□ -0.65
USP30-205ENST00000470117 CALML3P27482 149 aa11□□□□□ -0.65
USP30-205ENST00000470117 ALDH5A1P51649 535 aaPredicted RBP11□□□□□ -0.65
USP30-205ENST00000470117 SMAD3P84022 425 aaKnown RBP11□□□□□ -0.65
USP30-205ENST00000470117 ZNF543Q08ER8 600 aa11□□□□□ -0.65
USP30-205ENST00000470117 BAATQ14032 418 aaPredicted RBP11□□□□□ -0.65
USP30-205ENST00000470117 FSCN1Q16658 493 aaKnown RBP11□□□□□ -0.65
USP30-205ENST00000470117 TTC14Q96N46 770 aa11□□□□□ -0.65
USP30-205ENST00000470117 PPP1R12CQ9BZL4 782 aa11□□□□□ -0.65
USP30-205ENST00000470117 OSBPL3Q9H4L5 887 aa11□□□□□ -0.65
USP30-205ENST00000470117 PDGFCQ9NRA1 345 aa11□□□□□ -0.65
USP30-205ENST00000470117 PNMA2Q9UL42 364 aa11□□□□□ -0.65
USP30-205ENST00000470117 GNEQ9Y223 722 aaKnown RBP11□□□□□ -0.65
USP30-205ENST00000470117 CTAGE5O15320 804 aa10.99□□□□□ -0.65
USP30-205ENST00000470117 DYNC1LI2O43237 492 aaPredicted RBP10.99□□□□□ -0.65
USP30-205ENST00000470117 ZEB2O60315 1214 aa10.99□□□□□ -0.65
USP30-205ENST00000470117 KDM4AO75164 1064 aa10.99□□□□□ -0.65
USP30-205ENST00000470117 CABYRO75952 493 aa10.99□□□□□ -0.65
USP30-205ENST00000470117 TIMP1P01033 207 aa10.99□□□□□ -0.65
USP30-205ENST00000470117 GOLGA8HP0CJ92 632 aa10.99□□□□□ -0.65
USP30-205ENST00000470117 PPIGQ13427 754 aaKnown RBP eCLIP10.99□□□□□ -0.65
USP30-205ENST00000470117 USH1GQ495M9 461 aa10.99□□□□□ -0.65
USP30-205ENST00000470117 GPATCH4Q5T3I0 446 aaKnown RBP10.99□□□□□ -0.65
USP30-205ENST00000470117 RNF207Q6ZRF8 634 aa10.99□□□□□ -0.65
USP30-205ENST00000470117 KIAA1211Q6ZU35 1233 aa10.99□□□□□ -0.65
USP30-205ENST00000470117 IQCA1Q86XH1 822 aa10.99□□□□□ -0.65
USP30-205ENST00000470117 FAM126BQ8IXS8 530 aa10.99□□□□□ -0.65
USP30-205ENST00000470117 MPHOSPH6Q99547 160 aaKnown RBP10.99□□□□□ -0.65
USP30-205ENST00000470117 KAT14Q9H8E8 782 aa10.99□□□□□ -0.65
USP30-205ENST00000470117 WDR19Q8NEZ3 1342 aa10.99□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms