RNA–Protein interactions for RNA: ENST00000469802.5

COL9A3-208, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 2

Gene COL9A3, Length 680 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-208ENST00000469802 IL25Q9H293 177 aa19.19■□□□□ 0.66
COL9A3-208ENST00000469802 FRMPD2Q68DX3 1309 aaPredicted RBP19.19■□□□□ 0.66
COL9A3-208ENST00000469802 GJA9P57773 515 aa19.18■□□□□ 0.66
COL9A3-208ENST00000469802 TLE2Q04725 743 aa19.18■□□□□ 0.66
COL9A3-208ENST00000469802 TTC22Q5TAA0 569 aa19.18■□□□□ 0.66
COL9A3-208ENST00000469802 SH3RF1Q7Z6J0 888 aa19.18■□□□□ 0.66
COL9A3-208ENST00000469802 DGKHQ86XP1 1220 aa19.18■□□□□ 0.66
COL9A3-208ENST00000469802 GPCPD1Q9NPB8 672 aa19.18■□□□□ 0.66
COL9A3-208ENST00000469802 LAMA2P24043 3122 aaKnown RBP19.18■□□□□ 0.66
COL9A3-208ENST00000469802 TRIM43BA6NCK2 446 aa19.17■□□□□ 0.66
COL9A3-208ENST00000469802 ASB14A6NK59 587 aa19.17■□□□□ 0.66
COL9A3-208ENST00000469802 CTAGE5O15320 804 aa19.17■□□□□ 0.66
COL9A3-208ENST00000469802 IRX5P78411 483 aaPredicted RBP19.17■□□□□ 0.66
COL9A3-208ENST00000469802 MORC4Q8TE76 937 aa19.17■□□□□ 0.66
COL9A3-208ENST00000469802 TRIM43Q96BQ3 446 aaPredicted RBP19.17■□□□□ 0.66
COL9A3-208ENST00000469802 PRDM5Q9NQX1 630 aaPredicted RBP19.17■□□□□ 0.66
COL9A3-208ENST00000469802 WDR19Q8NEZ3 1342 aa19.17■□□□□ 0.66
COL9A3-208ENST00000469802 KDM4AO75164 1064 aa19.16■□□□□ 0.66
COL9A3-208ENST00000469802 KCNA10Q16322 511 aa19.16■□□□□ 0.66
COL9A3-208ENST00000469802 ANKRD33Q7Z3H0 272 aa19.16■□□□□ 0.66
COL9A3-208ENST00000469802 NUP133Q8WUM0 1156 aa19.16■□□□□ 0.66
COL9A3-208ENST00000469802 ANKS1AQ92625 1134 aa19.16■□□□□ 0.66
COL9A3-208ENST00000469802 ZKSCAN3Q9BRR0 538 aa19.16■□□□□ 0.66
COL9A3-208ENST00000469802 STARD7Q9NQZ5 370 aa19.16■□□□□ 0.66
COL9A3-208ENST00000469802 DDX49Q9Y6V7 483 aaKnown RBP19.16■□□□□ 0.66
COL9A3-208ENST00000469802 RAD50Q92878 1312 aa19.16■□□□□ 0.66
COL9A3-208ENST00000469802 NFIBO00712 420 aa19.15■□□□□ 0.66
COL9A3-208ENST00000469802 KIAA0355O15063 1070 aa19.15■□□□□ 0.66
COL9A3-208ENST00000469802 CLTBP09497 229 aa19.15■□□□□ 0.66
COL9A3-208ENST00000469802 C6orf222P0C671 652 aaPredicted RBP19.15■□□□□ 0.66
COL9A3-208ENST00000469802 GPATCH4Q5T3I0 446 aaKnown RBP19.15■□□□□ 0.66
COL9A3-208ENST00000469802 NSMFQ6X4W1 530 aa19.15■□□□□ 0.66
COL9A3-208ENST00000469802 PCSK9Q8NBP7 692 aaKnown RBP19.15■□□□□ 0.66
COL9A3-208ENST00000469802 TOX2Q96NM4 488 aa19.15■□□□□ 0.66
COL9A3-208ENST00000469802 PNMA2Q9UL42 364 aa19.15■□□□□ 0.66
COL9A3-208ENST00000469802 GNEQ9Y223 722 aaKnown RBP19.15■□□□□ 0.66
COL9A3-208ENST00000469802 ELP1O95163 1332 aa19.15■□□□□ 0.66
COL9A3-208ENST00000469802 KIAA1217Q5T5P2 1943 aa19.14■□□□□ 0.65
COL9A3-208ENST00000469802 LOC102724159A0A0B4J2E5 919 aa19.14■□□□□ 0.65
COL9A3-208ENST00000469802 C11orf97A0A1B0GVM6 126 aaPredicted RBP19.14■□□□□ 0.65
COL9A3-208ENST00000469802 B4E1Z4 1266 aa19.14■□□□□ 0.65
COL9A3-208ENST00000469802 PQBP1O60828 265 aaKnown RBP19.14■□□□□ 0.65
COL9A3-208ENST00000469802 ASGR1P07306 291 aa19.14■□□□□ 0.65
COL9A3-208ENST00000469802 ITGB8P26012 769 aa19.14■□□□□ 0.65
COL9A3-208ENST00000469802 PWP2Q15269 919 aaKnown RBP19.14■□□□□ 0.65
COL9A3-208ENST00000469802 IMMTQ16891 758 aaKnown RBP19.14■□□□□ 0.65
COL9A3-208ENST00000469802 CCDC178Q5BJE1 867 aa19.14■□□□□ 0.65
COL9A3-208ENST00000469802 IQCA1Q86XH1 822 aa19.14■□□□□ 0.65
COL9A3-208ENST00000469802 ENAHQ8N8S7 591 aaPredicted RBP19.14■□□□□ 0.65
COL9A3-208ENST00000469802 CLEC4DQ8WXI8 215 aa19.14■□□□□ 0.65
COL9A3-208ENST00000469802 BADQ92934 168 aa19.14■□□□□ 0.65
COL9A3-208ENST00000469802 PURBQ96QR8 312 aaKnown RBP19.14■□□□□ 0.65
COL9A3-208ENST00000469802 SPC25Q9HBM1 224 aa19.14■□□□□ 0.65
COL9A3-208ENST00000469802 CTNNA3Q9UI47 895 aa19.14■□□□□ 0.65
COL9A3-208ENST00000469802 COL6A3P12111 3177 aa19.14■□□□□ 0.65
COL9A3-208ENST00000469802 TNFAIP2Q03169 654 aa19.13■□□□□ 0.65
COL9A3-208ENST00000469802 TAPT1Q6NXT6 567 aa19.13■□□□□ 0.65
COL9A3-208ENST00000469802 PNMA1Q8ND90 353 aa19.13■□□□□ 0.65
COL9A3-208ENST00000469802 GLT1D1Q96MS3 346 aa19.13■□□□□ 0.65
COL9A3-208ENST00000469802 ZSCAN10Q96SZ4 725 aaPredicted RBP19.13■□□□□ 0.65
COL9A3-208ENST00000469802 TNKSO95271 1327 aa19.12■□□□□ 0.65
COL9A3-208ENST00000469802 CDK7P50613 346 aa19.12■□□□□ 0.65
COL9A3-208ENST00000469802 ALDH5A1P51649 535 aaPredicted RBP19.12■□□□□ 0.65
COL9A3-208ENST00000469802 IRX6P78412 446 aaPredicted RBP19.12■□□□□ 0.65
COL9A3-208ENST00000469802 FAAP100Q0VG06 881 aa19.12■□□□□ 0.65
COL9A3-208ENST00000469802 BAATQ14032 418 aaPredicted RBP19.12■□□□□ 0.65
COL9A3-208ENST00000469802 GNASQ5JWF2 1037 aa19.12■□□□□ 0.65
COL9A3-208ENST00000469802 SLC30A10Q6XR72 485 aa19.12■□□□□ 0.65
COL9A3-208ENST00000469802 TLK2Q86UE8 772 aa19.12■□□□□ 0.65
COL9A3-208ENST00000469802 FBXO16Q8IX29 292 aaPredicted RBP19.12■□□□□ 0.65
COL9A3-208ENST00000469802 VTA1Q9NP79 307 aa19.12■□□□□ 0.65
COL9A3-208ENST00000469802 ZSWIM5Q9P217 1185 aa19.12■□□□□ 0.65
COL9A3-208ENST00000469802 ADD3Q9UEY8 706 aaKnown RBP19.12■□□□□ 0.65
COL9A3-208ENST00000469802 MROH7Q68CQ1 1323 aa19.11■□□□□ 0.65
COL9A3-208ENST00000469802 GOLGA8HP0CJ92 632 aa19.11■□□□□ 0.65
COL9A3-208ENST00000469802 SMPD1P17405 629 aa19.11■□□□□ 0.65
COL9A3-208ENST00000469802 C9orf50Q5SZB4 431 aa19.11■□□□□ 0.65
COL9A3-208ENST00000469802 DEFB123Q8N688 67 aa19.11■□□□□ 0.65
COL9A3-208ENST00000469802 KRT23Q9C075 422 aa19.11■□□□□ 0.65
COL9A3-208ENST00000469802 CPVLQ9H3G5 476 aa19.11■□□□□ 0.65
COL9A3-208ENST00000469802 CNNM2Q9H8M5 875 aa19.11■□□□□ 0.65
COL9A3-208ENST00000469802 PDGFCQ9NRA1 345 aa19.11■□□□□ 0.65
COL9A3-208ENST00000469802 TBX21Q9UL17 535 aa19.11■□□□□ 0.65
COL9A3-208ENST00000469802 A0A0U1RQG5 324 aaPredicted RBP19.1■□□□□ 0.65
COL9A3-208ENST00000469802 PTGS1P23219 599 aa19.1■□□□□ 0.65
COL9A3-208ENST00000469802 SHHQ15465 462 aa19.1■□□□□ 0.65
COL9A3-208ENST00000469802 ASPRV1Q53RT3 343 aa19.1■□□□□ 0.65
COL9A3-208ENST00000469802 Q7L0L9 218 aa19.1■□□□□ 0.65
COL9A3-208ENST00000469802 KAT14Q9H8E8 782 aa19.1■□□□□ 0.65
COL9A3-208ENST00000469802 Q9Y3F1 56 aa19.1■□□□□ 0.65
COL9A3-208ENST00000469802 SCN10AQ9Y5Y9 1956 aa19.1■□□□□ 0.65
COL9A3-208ENST00000469802 PTPDC1A2A3K4 754 aa19.09■□□□□ 0.65
COL9A3-208ENST00000469802 DCDC2CA8MYV0 355 aa19.09■□□□□ 0.65
COL9A3-208ENST00000469802 EDNRBP24530 442 aa19.09■□□□□ 0.65
COL9A3-208ENST00000469802 CHMLP26374 656 aa19.09■□□□□ 0.65
COL9A3-208ENST00000469802 RPS6P62753 249 aaKnown RBP19.09■□□□□ 0.65
COL9A3-208ENST00000469802 BEX3Q00994 111 aa19.09■□□□□ 0.65
COL9A3-208ENST00000469802 SEC23AQ15436 765 aa19.09■□□□□ 0.65
COL9A3-208ENST00000469802 FSCN1Q16658 493 aaKnown RBP19.09■□□□□ 0.65
COL9A3-208ENST00000469802 TMEM63BQ5T3F8 832 aa19.09■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms