RNA–Protein interactions for RNA: ENST00000469534.1

ITGA6-208, Transcript of integrin subunit alpha 6, humanhuman

TSL 2

Gene ITGA6, Length 581 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGA6-208ENST00000469534 DOCK1Q14185 1865 aa6.12□□□□□ -1.43
ITGA6-208ENST00000469534 SEPT2Q15019 361 aa6.12□□□□□ -1.43
ITGA6-208ENST00000469534 SUZ12Q15022 739 aaKnown RBP6.12□□□□□ -1.43
ITGA6-208ENST00000469534 RAB3GAP1Q15042 981 aa6.12□□□□□ -1.43
ITGA6-208ENST00000469534 SEC23AQ15436 765 aa6.12□□□□□ -1.43
ITGA6-208ENST00000469534 ZYXQ15942 572 aaKnown RBP6.12□□□□□ -1.43
ITGA6-208ENST00000469534 CERKLQ49MI3 558 aaPredicted RBP6.12□□□□□ -1.43
ITGA6-208ENST00000469534 IFIT1BQ5T764 474 aaKnown RBP6.12□□□□□ -1.43
ITGA6-208ENST00000469534 FRMPD2Q68DX3 1309 aaPredicted RBP6.12□□□□□ -1.43
ITGA6-208ENST00000469534 TMED8Q6PL24 325 aaPredicted RBP6.12□□□□□ -1.43
ITGA6-208ENST00000469534 MOB2Q70IA6 237 aa6.12□□□□□ -1.43
ITGA6-208ENST00000469534 USP48Q86UV5 1035 aa6.12□□□□□ -1.43
ITGA6-208ENST00000469534 CERS3Q8IU89 383 aa6.12□□□□□ -1.43
ITGA6-208ENST00000469534 KCTD17Q8N5Z5 321 aa6.12□□□□□ -1.43
ITGA6-208ENST00000469534 ENAHQ8N8S7 591 aaPredicted RBP6.12□□□□□ -1.43
ITGA6-208ENST00000469534 MTMR14Q8NCE2 650 aa6.12□□□□□ -1.43
ITGA6-208ENST00000469534 IGDCC4Q8TDY8 1250 aa6.12□□□□□ -1.43
ITGA6-208ENST00000469534 CEP95Q96GE4 821 aa6.12□□□□□ -1.43
ITGA6-208ENST00000469534 WDR90Q96KV7 1748 aa6.12□□□□□ -1.43
ITGA6-208ENST00000469534 PCMTD1Q96MG8 357 aaPredicted RBP6.12□□□□□ -1.43
ITGA6-208ENST00000469534 AGBL1Q96MI9 1066 aa6.12□□□□□ -1.43
ITGA6-208ENST00000469534 GLIS2Q9BZE0 524 aaPredicted RBP6.12□□□□□ -1.43
ITGA6-208ENST00000469534 DEFB129Q9H1M3 183 aa6.12□□□□□ -1.43
ITGA6-208ENST00000469534 CPVLQ9H3G5 476 aa6.12□□□□□ -1.43
ITGA6-208ENST00000469534 ZNF408Q9H9D4 720 aa6.12□□□□□ -1.43
ITGA6-208ENST00000469534 NMRK2Q9NPI5 230 aa6.12□□□□□ -1.43
ITGA6-208ENST00000469534 ADARB2Q9NS39 739 aaKnown RBP6.12□□□□□ -1.43
ITGA6-208ENST00000469534 SERPINB13Q9UIV8 391 aa6.12□□□□□ -1.43
ITGA6-208ENST00000469534 STX8Q9UNK0 236 aa6.12□□□□□ -1.43
ITGA6-208ENST00000469534 ANGEL1Q9UNK9 670 aaKnown RBP6.12□□□□□ -1.43
ITGA6-208ENST00000469534 TCHHQ07283 1943 aa6.11□□□□□ -1.43
ITGA6-208ENST00000469534 SSC5DA1L4H1 1573 aa6.11□□□□□ -1.43
ITGA6-208ENST00000469534 RNF225M0QZC1 329 aaPredicted RBP6.11□□□□□ -1.43
ITGA6-208ENST00000469534 ERVH48-1M5A8F1 160 aa6.11□□□□□ -1.43
ITGA6-208ENST00000469534 TRAF5O00463 557 aa6.11□□□□□ -1.43
ITGA6-208ENST00000469534 ZBTB43O43298 467 aa6.11□□□□□ -1.43
ITGA6-208ENST00000469534 IGSF3O75054 1194 aa6.11□□□□□ -1.43
ITGA6-208ENST00000469534 GH2P01242 217 aa6.11□□□□□ -1.43
ITGA6-208ENST00000469534 FGRP09769 529 aa6.11□□□□□ -1.43
ITGA6-208ENST00000469534 GOLGA8HP0CJ92 632 aa6.11□□□□□ -1.43
ITGA6-208ENST00000469534 GJB2P29033 226 aa6.11□□□□□ -1.43
ITGA6-208ENST00000469534 CDC27P30260 824 aa6.11□□□□□ -1.43
ITGA6-208ENST00000469534 INPP5BP32019 993 aa6.11□□□□□ -1.43
ITGA6-208ENST00000469534 METAP2P50579 478 aaKnown RBP eCLIP6.11□□□□□ -1.43
ITGA6-208ENST00000469534 KRT76Q01546 638 aa6.11□□□□□ -1.43
ITGA6-208ENST00000469534 GUCY1B3Q02153 619 aa6.11□□□□□ -1.43
ITGA6-208ENST00000469534 DGKZQ13574 1117 aa6.11□□□□□ -1.43
ITGA6-208ENST00000469534 PKP1Q13835 747 aa6.11□□□□□ -1.43
ITGA6-208ENST00000469534 SART3Q15020 963 aaKnown RBP6.11□□□□□ -1.43
ITGA6-208ENST00000469534 ANKRD1Q15327 319 aa6.11□□□□□ -1.43
ITGA6-208ENST00000469534 ABCB5Q2M3G0 1257 aa6.11□□□□□ -1.43
ITGA6-208ENST00000469534 FOXD4L6Q3SYB3 417 aaPredicted RBP6.11□□□□□ -1.43
ITGA6-208ENST00000469534 MAP1SQ66K74 1059 aaPredicted RBP6.11□□□□□ -1.43
ITGA6-208ENST00000469534 APOA5Q6Q788 366 aa6.11□□□□□ -1.43
ITGA6-208ENST00000469534 FOXD4L3Q6VB84 417 aaPredicted RBP6.11□□□□□ -1.43
ITGA6-208ENST00000469534 IQCA1Q86XH1 822 aa6.11□□□□□ -1.43
ITGA6-208ENST00000469534 ZNF654Q8IZM8 581 aa6.11□□□□□ -1.43
ITGA6-208ENST00000469534 ZNF784Q8NCA9 323 aaPredicted RBP6.11□□□□□ -1.43
ITGA6-208ENST00000469534 DCPSQ96C86 337 aaKnown RBP6.11□□□□□ -1.43
ITGA6-208ENST00000469534 CHAMP1Q96JM3 812 aa6.11□□□□□ -1.43
ITGA6-208ENST00000469534 TMEM87BQ96K49 555 aa6.11□□□□□ -1.43
ITGA6-208ENST00000469534 TEPSINQ96N21 525 aa6.11□□□□□ -1.43
ITGA6-208ENST00000469534 TMEM47Q9BQJ4 181 aa6.11□□□□□ -1.43
ITGA6-208ENST00000469534 TAF1DQ9H5J8 278 aaPredicted RBP6.11□□□□□ -1.43
ITGA6-208ENST00000469534 PI4KBQ9UBF8 816 aa6.11□□□□□ -1.43
ITGA6-208ENST00000469534 CLIP2Q9UDT6 1046 aa6.11□□□□□ -1.43
ITGA6-208ENST00000469534 SMC3Q9UQE7 1217 aa6.11□□□□□ -1.43
ITGA6-208ENST00000469534 SLC12A7Q9Y666 1083 aa6.11□□□□□ -1.43
ITGA6-208ENST00000469534 ATRNL1Q5VV63 1379 aa6.1□□□□□ -1.43
ITGA6-208ENST00000469534 PTPDC1A2A3K4 754 aa6.1□□□□□ -1.43
ITGA6-208ENST00000469534 PFKFB2O60825 505 aa6.1□□□□□ -1.43
ITGA6-208ENST00000469534 PLEKHA8P1O95397 391 aa6.1□□□□□ -1.43
ITGA6-208ENST00000469534 CTDNEP1O95476 244 aa6.1□□□□□ -1.43
ITGA6-208ENST00000469534 EEF2P13639 858 aaKnown RBP6.1□□□□□ -1.43
ITGA6-208ENST00000469534 GUCY1A2P33402 732 aa6.1□□□□□ -1.43
ITGA6-208ENST00000469534 ECE1P42892 770 aa6.1□□□□□ -1.43
ITGA6-208ENST00000469534 MCM2P49736 904 aa6.1□□□□□ -1.43
ITGA6-208ENST00000469534 SNAP25P60880 206 aa6.1□□□□□ -1.43
ITGA6-208ENST00000469534 RELBQ01201 579 aa6.1□□□□□ -1.43
ITGA6-208ENST00000469534 CUL4AQ13619 759 aa6.1□□□□□ -1.43
ITGA6-208ENST00000469534 TNFAIP1Q13829 316 aa6.1□□□□□ -1.43
ITGA6-208ENST00000469534 RTN1Q16799 776 aa6.1□□□□□ -1.43
ITGA6-208ENST00000469534 CCDC96Q2M329 555 aa6.1□□□□□ -1.43
ITGA6-208ENST00000469534 TPRNQ4KMQ1 711 aa6.1□□□□□ -1.43
ITGA6-208ENST00000469534 OTUD7BQ6GQQ9 843 aa6.1□□□□□ -1.43
ITGA6-208ENST00000469534 RCSD1Q6JBY9 416 aa6.1□□□□□ -1.43
ITGA6-208ENST00000469534 SYNE3Q6ZMZ3 975 aa6.1□□□□□ -1.43
ITGA6-208ENST00000469534 KRT26Q7Z3Y9 468 aa6.1□□□□□ -1.43
ITGA6-208ENST00000469534 APOBEC3FQ8IUX4 373 aaKnown RBP6.1□□□□□ -1.43
ITGA6-208ENST00000469534 STAG2Q8N3U4 1231 aa6.1□□□□□ -1.43
ITGA6-208ENST00000469534 CCDC155Q8N6L0 562 aa6.1□□□□□ -1.43
ITGA6-208ENST00000469534 NEDD1Q8NHV4 660 aa6.1□□□□□ -1.43
ITGA6-208ENST00000469534 ACER1Q8TDN7 264 aa6.1□□□□□ -1.43
ITGA6-208ENST00000469534 PHKBQ93100 1093 aa6.1□□□□□ -1.43
ITGA6-208ENST00000469534 GTF3C6Q969F1 213 aa6.1□□□□□ -1.43
ITGA6-208ENST00000469534 ZKSCAN4Q969J2 545 aaPredicted RBP6.1□□□□□ -1.43
ITGA6-208ENST00000469534 ZSCAN31Q96LW9 406 aaPredicted RBP6.1□□□□□ -1.43
ITGA6-208ENST00000469534 AIFM3Q96NN9 605 aa6.1□□□□□ -1.43
ITGA6-208ENST00000469534 INSM2Q96T92 566 aaPredicted RBP6.1□□□□□ -1.43
ITGA6-208ENST00000469534 NUP88Q99567 741 aaPredicted RBP6.1□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms