RNA–Protein interactions for RNA: ENST00000469479.1

VPS8-219, Transcript of VPS8, CORVET complex subunit, humanhuman

TSL 4

Gene VPS8, Length 583 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8-219ENST00000469479 RRP7BPQ9NSQ0 103 aa7.28□□□□□ -1.24
VPS8-219ENST00000469479 TTF2Q9UNY4 1162 aaKnown RBP7.28□□□□□ -1.24
VPS8-219ENST00000469479 ANKRD30AQ9BXX3 1397 aa7.28□□□□□ -1.24
VPS8-219ENST00000469479 ATP2B2Q01814 1243 aa7.27□□□□□ -1.25
VPS8-219ENST00000469479 DACT3Q96B18 629 aaPredicted RBP7.27□□□□□ -1.25
VPS8-219ENST00000469479 SHISA4Q96DD7 197 aa7.27□□□□□ -1.25
VPS8-219ENST00000469479 TMEM131LA2VDJ0 1609 aa7.27□□□□□ -1.25
VPS8-219ENST00000469479 BCL9LQ86UU0 1499 aa7.26□□□□□ -1.25
VPS8-219ENST00000469479 OTOL1A6NHN0 477 aaPredicted RBP7.26□□□□□ -1.25
VPS8-219ENST00000469479 PI3P19957 117 aa7.26□□□□□ -1.25
VPS8-219ENST00000469479 AFF3P51826 1226 aaKnown RBP7.26□□□□□ -1.25
VPS8-219ENST00000469479 SRSF3P84103 164 aaKnown RBP7.26□□□□□ -1.25
VPS8-219ENST00000469479 FMR1Q06787 632 aaKnown RBP eCLIP7.26□□□□□ -1.25
VPS8-219ENST00000469479 ZXDCQ2QGD7 858 aaPredicted RBP7.26□□□□□ -1.25
VPS8-219ENST00000469479 LINC01599Q8WXQ3 324 aa7.26□□□□□ -1.25
VPS8-219ENST00000469479 FRMD6Q96NE9 622 aa7.26□□□□□ -1.25
VPS8-219ENST00000469479 SIRT5Q9NXA8 310 aa7.26□□□□□ -1.25
VPS8-219ENST00000469479 COL22A1Q8NFW1 1626 aaPredicted RBP7.26□□□□□ -1.25
VPS8-219ENST00000469479 MYOM2P54296 1465 aa7.25□□□□□ -1.25
VPS8-219ENST00000469479 C1orf167Q5SNV9 1468 aa7.25□□□□□ -1.25
VPS8-219ENST00000469479 XRN1Q8IZH2 1706 aaKnown RBP7.25□□□□□ -1.25
VPS8-219ENST00000469479 SEPT6Q14141 434 aa7.25□□□□□ -1.25
VPS8-219ENST00000469479 ZSCAN29Q8IWY8 852 aaPredicted RBP7.25□□□□□ -1.25
VPS8-219ENST00000469479 CYB5D2Q8WUJ1 264 aa7.25□□□□□ -1.25
VPS8-219ENST00000469479 RNF141Q8WVD5 230 aa7.25□□□□□ -1.25
VPS8-219ENST00000469479 ACSF2Q96CM8 615 aaPredicted RBP7.25□□□□□ -1.25
VPS8-219ENST00000469479 MBD1Q9UIS9 605 aaPredicted RBP7.25□□□□□ -1.25
VPS8-219ENST00000469479 CROCC2H7BZ55 1655 aa7.25□□□□□ -1.25
VPS8-219ENST00000469479 NPHP3Q7Z494 1330 aa7.25□□□□□ -1.25
VPS8-219ENST00000469479 TEKQ02763 1124 aa7.24□□□□□ -1.25
VPS8-219ENST00000469479 KRTAP1-1Q07627 177 aa7.24□□□□□ -1.25
VPS8-219ENST00000469479 TSNAXIP1Q2TAA8 658 aa7.24□□□□□ -1.25
VPS8-219ENST00000469479 ADGRF1Q5T601 910 aa7.24□□□□□ -1.25
VPS8-219ENST00000469479 DIEXFQ68CQ4 756 aaKnown RBP7.24□□□□□ -1.25
VPS8-219ENST00000469479 AGMOQ6ZNB7 445 aa7.24□□□□□ -1.25
VPS8-219ENST00000469479 DEFB132Q7Z7B7 95 aa7.24□□□□□ -1.25
VPS8-219ENST00000469479 SP8Q8IXZ3 490 aa7.24□□□□□ -1.25
VPS8-219ENST00000469479 PANK1Q8TE04 598 aa7.24□□□□□ -1.25
VPS8-219ENST00000469479 MIR1-1HGQ9H1L0 117 aa7.24□□□□□ -1.25
VPS8-219ENST00000469479 EBF1Q9UH73 591 aa7.24□□□□□ -1.25
VPS8-219ENST00000469479 PCDHB5Q9Y5E4 795 aa7.24□□□□□ -1.25
VPS8-219ENST00000469479 GCC2Q8IWJ2 1684 aa7.24□□□□□ -1.25
VPS8-219ENST00000469479 ABCC5O15440 1437 aa7.24□□□□□ -1.25
VPS8-219ENST00000469479 TNKS1BP1Q9C0C2 1729 aaKnown RBP7.24□□□□□ -1.25
VPS8-219ENST00000469479 RALGAPBQ86X10 1494 aa7.24□□□□□ -1.25
VPS8-219ENST00000469479 LRPPRCP42704 1394 aaKnown RBP7.23□□□□□ -1.25
VPS8-219ENST00000469479 RBM47A0AV96 593 aaKnown RBP7.23□□□□□ -1.25
VPS8-219ENST00000469479 SLC22A31A6NKX4 558 aa7.23□□□□□ -1.25
VPS8-219ENST00000469479 N4BP3O15049 544 aa7.23□□□□□ -1.25
VPS8-219ENST00000469479 YARSP54577 528 aaKnown RBP7.23□□□□□ -1.25
VPS8-219ENST00000469479 CCDC85BQ15834 202 aaPredicted RBP7.23□□□□□ -1.25
VPS8-219ENST00000469479 OLFML2BQ68BL8 750 aa7.23□□□□□ -1.25
VPS8-219ENST00000469479 NLRX1Q86UT6 975 aa7.23□□□□□ -1.25
VPS8-219ENST00000469479 UNC5CLQ8IV45 518 aa7.23□□□□□ -1.25
VPS8-219ENST00000469479 SETDB2Q96T68 719 aa7.23□□□□□ -1.25
VPS8-219ENST00000469479 CRTAC1Q9NQ79 661 aa7.23□□□□□ -1.25
VPS8-219ENST00000469479 GNEQ9Y223 722 aaKnown RBP7.23□□□□□ -1.25
VPS8-219ENST00000469479 ZNF281Q9Y2X9 895 aa7.23□□□□□ -1.25
VPS8-219ENST00000469479 PTPRUQ92729 1446 aa7.23□□□□□ -1.25
VPS8-219ENST00000469479 DAPK1P53355 1430 aa7.22□□□□□ -1.25
VPS8-219ENST00000469479 RPL6Q02878 288 aaKnown RBP7.22□□□□□ -1.25
VPS8-219ENST00000469479 KRT27Q7Z3Y8 459 aa7.22□□□□□ -1.25
VPS8-219ENST00000469479 TEPSINQ96N21 525 aa7.22□□□□□ -1.25
VPS8-219ENST00000469479 WWC3Q9ULE0 1092 aa7.22□□□□□ -1.25
VPS8-219ENST00000469479 FEZF2Q8TBJ5 459 aa7.21□□□□□ -1.26
VPS8-219ENST00000469479 DDX17Q92841 729 aaKnown RBP7.21□□□□□ -1.26
VPS8-219ENST00000469479 SLIT2O94813 1529 aa7.21□□□□□ -1.26
VPS8-219ENST00000469479 PARD3Q8TEW0 1356 aa7.2□□□□□ -1.26
VPS8-219ENST00000469479 NINLQ9Y2I6 1382 aa7.2□□□□□ -1.26
VPS8-219ENST00000469479 IQGAP3Q86VI3 1631 aa7.2□□□□□ -1.26
VPS8-219ENST00000469479 DISP2A7MBM2 1401 aa7.2□□□□□ -1.26
VPS8-219ENST00000469479 PRAG1Q86YV5 1406 aa7.2□□□□□ -1.26
VPS8-219ENST00000469479 ADGRL2O95490 1459 aa7.2□□□□□ -1.26
VPS8-219ENST00000469479 ZC3H12DA2A288 527 aaKnown RBP7.2□□□□□ -1.26
VPS8-219ENST00000469479 NOTOA8MTQ0 251 aa7.2□□□□□ -1.26
VPS8-219ENST00000469479 ABLIM1O14639 778 aa7.2□□□□□ -1.26
VPS8-219ENST00000469479 LRRN2O75325 713 aa7.2□□□□□ -1.26
VPS8-219ENST00000469479 GALK1P51570 392 aa7.2□□□□□ -1.26
VPS8-219ENST00000469479 SLC14A2Q15849 920 aa7.2□□□□□ -1.26
VPS8-219ENST00000469479 CLEC16AQ2KHT3 1053 aa7.2□□□□□ -1.26
VPS8-219ENST00000469479 SIRT2Q8IXJ6 389 aa7.2□□□□□ -1.26
VPS8-219ENST00000469479 FAM13CQ8NE31 585 aa7.2□□□□□ -1.26
VPS8-219ENST00000469479 G6PC3Q9BUM1 346 aa7.2□□□□□ -1.26
VPS8-219ENST00000469479 ASPNQ9BXN1 380 aa7.2□□□□□ -1.26
VPS8-219ENST00000469479 ANKRD50Q9ULJ7 1429 aa7.19□□□□□ -1.26
VPS8-219ENST00000469479 SUV39H1O43463 412 aa7.19□□□□□ -1.26
VPS8-219ENST00000469479 KIR2DL1P43626 348 aaPredicted RBP7.19□□□□□ -1.26
VPS8-219ENST00000469479 KIR2DL2P43627 348 aaPredicted RBP7.19□□□□□ -1.26
VPS8-219ENST00000469479 VPS72Q15906 364 aa7.19□□□□□ -1.26
VPS8-219ENST00000469479 SPATS1Q496A3 300 aa7.19□□□□□ -1.26
VPS8-219ENST00000469479 RNF111Q6ZNA4 994 aa7.19□□□□□ -1.26
VPS8-219ENST00000469479 ZDHHC14Q8IZN3 488 aa7.19□□□□□ -1.26
VPS8-219ENST00000469479 ENOX1Q8TC92 643 aaKnown RBP7.19□□□□□ -1.26
VPS8-219ENST00000469479 CNTD2Q9H8S5 307 aa7.19□□□□□ -1.26
VPS8-219ENST00000469479 LUC7LQ9NQ29 371 aaKnown RBP7.19□□□□□ -1.26
VPS8-219ENST00000469479 GLI3P10071 1580 aa7.19□□□□□ -1.26
VPS8-219ENST00000469479 HFM1A2PYH4 1435 aa7.18□□□□□ -1.26
VPS8-219ENST00000469479 NALCNQ8IZF0 1738 aa7.18□□□□□ -1.26
VPS8-219ENST00000469479 IRS4O14654 1257 aaPredicted RBP7.18□□□□□ -1.26
VPS8-219ENST00000469479 NRDCO43847 1150 aa7.18□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms