RNA–Protein interactions for RNA: ENST00000469054.1

VPS13D-204, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

TSL 3

Gene VPS13D, Length 567 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-204ENST00000469054 PNMA6FA0A0J9YX94 578 aa13.86□□□□□ -0.19
VPS13D-204ENST00000469054 COBLO75128 1261 aa13.86□□□□□ -0.19
VPS13D-204ENST00000469054 XRCC5P13010 732 aaKnown RBP13.86□□□□□ -0.19
VPS13D-204ENST00000469054 CDC27P30260 824 aa13.86□□□□□ -0.19
VPS13D-204ENST00000469054 ADD1P35611 737 aaKnown RBP13.86□□□□□ -0.19
VPS13D-204ENST00000469054 AK2P54819 239 aa13.86□□□□□ -0.19
VPS13D-204ENST00000469054 KCTD2Q14681 263 aa13.86□□□□□ -0.19
VPS13D-204ENST00000469054 DPP9Q86TI2 863 aa13.86□□□□□ -0.19
VPS13D-204ENST00000469054 FBXO11Q86XK2 927 aa13.86□□□□□ -0.19
VPS13D-204ENST00000469054 CCDC82Q8N4S0 544 aa13.86□□□□□ -0.19
VPS13D-204ENST00000469054 PXYLP1Q8TE99 480 aa13.86□□□□□ -0.19
VPS13D-204ENST00000469054 RRP36Q96EU6 259 aaKnown RBP13.86□□□□□ -0.19
VPS13D-204ENST00000469054 TBC1D32Q96NH3 1257 aa13.86□□□□□ -0.19
VPS13D-204ENST00000469054 AMNQ9BXJ7 453 aa13.86□□□□□ -0.19
VPS13D-204ENST00000469054 NID2Q14112 1375 aa13.85□□□□□ -0.19
VPS13D-204ENST00000469054 ADCY3O60266 1144 aa13.85□□□□□ -0.19
VPS13D-204ENST00000469054 HOXC6P09630 235 aa13.85□□□□□ -0.19
VPS13D-204ENST00000469054 USH1GQ495M9 461 aa13.85□□□□□ -0.19
VPS13D-204ENST00000469054 MUM1L1Q5H9M0 696 aa13.85□□□□□ -0.19
VPS13D-204ENST00000469054 TNS4Q8IZW8 715 aa13.85□□□□□ -0.19
VPS13D-204ENST00000469054 ANKRD35Q8N283 1001 aa13.85□□□□□ -0.19
VPS13D-204ENST00000469054 SLAIN1Q8ND83 568 aa13.85□□□□□ -0.19
VPS13D-204ENST00000469054 CLEC4DQ8WXI8 215 aa13.85□□□□□ -0.19
VPS13D-204ENST00000469054 DDX11Q96FC9 970 aa13.85□□□□□ -0.19
VPS13D-204ENST00000469054 APBA2Q99767 749 aa13.85□□□□□ -0.19
VPS13D-204ENST00000469054 SLC5A4Q9NY91 659 aa13.85□□□□□ -0.19
VPS13D-204ENST00000469054 TPCN1Q9ULQ1 816 aa13.85□□□□□ -0.19
VPS13D-204ENST00000469054 ABCB11O95342 1321 aa13.85□□□□□ -0.19
VPS13D-204ENST00000469054 PARP14Q460N5 1801 aa13.85□□□□□ -0.19
VPS13D-204ENST00000469054 PPP1R11O60927 126 aaPredicted RBP13.84□□□□□ -0.19
VPS13D-204ENST00000469054 PGK2P07205 417 aa13.84□□□□□ -0.19
VPS13D-204ENST00000469054 GRK4P32298 578 aa13.84□□□□□ -0.19
VPS13D-204ENST00000469054 CCT2P78371 535 aaKnown RBP13.84□□□□□ -0.19
VPS13D-204ENST00000469054 FUT2Q10981 343 aa13.84□□□□□ -0.19
VPS13D-204ENST00000469054 TRAF1Q13077 416 aa13.84□□□□□ -0.19
VPS13D-204ENST00000469054 RABEP1Q15276 862 aa13.84□□□□□ -0.19
VPS13D-204ENST00000469054 SLC9C1Q4G0N8 1177 aa13.84□□□□□ -0.19
VPS13D-204ENST00000469054 TRMT44Q8IYL2 757 aaKnown RBP13.84□□□□□ -0.19
VPS13D-204ENST00000469054 NPLOC4Q8TAT6 608 aa13.84□□□□□ -0.19
VPS13D-204ENST00000469054 PIBF1Q8WXW3 757 aa13.84□□□□□ -0.19
VPS13D-204ENST00000469054 A1CFQ9NQ94 594 aaKnown RBP13.84□□□□□ -0.19
VPS13D-204ENST00000469054 SEC63Q9UGP8 760 aaKnown RBP13.84□□□□□ -0.19
VPS13D-204ENST00000469054 DIS3Q9Y2L1 958 aaKnown RBP13.84□□□□□ -0.19
VPS13D-204ENST00000469054 MRPL11Q9Y3B7 192 aaKnown RBP13.84□□□□□ -0.19
VPS13D-204ENST00000469054 PCDHA1Q9Y5I3 950 aa13.84□□□□□ -0.19
VPS13D-204ENST00000469054 DNAJC25-GNG10A0A024R161 153 aa13.83□□□□□ -0.2
VPS13D-204ENST00000469054 NFIBO00712 420 aa13.83□□□□□ -0.2
VPS13D-204ENST00000469054 ELNP15502 786 aa13.83□□□□□ -0.2
VPS13D-204ENST00000469054 ZNF792Q3KQV3 632 aa13.83□□□□□ -0.2
VPS13D-204ENST00000469054 NSMFQ6X4W1 530 aa13.83□□□□□ -0.2
VPS13D-204ENST00000469054 RGS22Q8NE09 1264 aa13.83□□□□□ -0.2
VPS13D-204ENST00000469054 IL27Q8NEV9 243 aa13.83□□□□□ -0.2
VPS13D-204ENST00000469054 SLKQ9H2G2 1235 aaPredicted RBP13.83□□□□□ -0.2
VPS13D-204ENST00000469054 V9GY48 417 aaPredicted RBP13.83□□□□□ -0.2
VPS13D-204ENST00000469054 PFASO15067 1338 aa13.83□□□□□ -0.2
VPS13D-204ENST00000469054 CNTNAP5Q8WYK1 1306 aa13.83□□□□□ -0.2
VPS13D-204ENST00000469054 ZSWIM8A7E2V4 1837 aa13.83□□□□□ -0.2
VPS13D-204ENST00000469054 hCG_1642624A0A1W2PR95 340 aa13.82□□□□□ -0.2
VPS13D-204ENST00000469054 POTEB2H3BUK9 544 aa13.82□□□□□ -0.2
VPS13D-204ENST00000469054 PFKFB2O60825 505 aa13.82□□□□□ -0.2
VPS13D-204ENST00000469054 STK3Q13188 491 aa13.82□□□□□ -0.2
VPS13D-204ENST00000469054 BAATQ14032 418 aaPredicted RBP13.82□□□□□ -0.2
VPS13D-204ENST00000469054 NTRK3Q16288 839 aa13.82□□□□□ -0.2
VPS13D-204ENST00000469054 CCL14Q16627 93 aa13.82□□□□□ -0.2
VPS13D-204ENST00000469054 NOL8Q76FK4 1167 aaKnown RBP13.82□□□□□ -0.2
VPS13D-204ENST00000469054 MCF2L2Q86YR7 1114 aa13.82□□□□□ -0.2
VPS13D-204ENST00000469054 SH3TC2Q8TF17 1288 aa13.82□□□□□ -0.2
VPS13D-204ENST00000469054 TRIB2Q92519 343 aa13.82□□□□□ -0.2
VPS13D-204ENST00000469054 ARMC5Q96C12 935 aa13.82□□□□□ -0.2
VPS13D-204ENST00000469054 MAF1Q9H063 256 aa13.82□□□□□ -0.2
VPS13D-204ENST00000469054 NCOA5Q9HCD5 579 aaKnown RBP13.82□□□□□ -0.2
VPS13D-204ENST00000469054 CYP39A1Q9NYL5 469 aa13.82□□□□□ -0.2
VPS13D-204ENST00000469054 PTPDC1A2A3K4 754 aa13.81□□□□□ -0.2
VPS13D-204ENST00000469054 HMGCRP04035 888 aa13.81□□□□□ -0.2
VPS13D-204ENST00000469054 IFNAR1P17181 557 aa13.81□□□□□ -0.2
VPS13D-204ENST00000469054 UBXN2AP68543 259 aa13.81□□□□□ -0.2
VPS13D-204ENST00000469054 SCRN1Q12765 414 aa13.81□□□□□ -0.2
VPS13D-204ENST00000469054 ME3Q16798 604 aa13.81□□□□□ -0.2
VPS13D-204ENST00000469054 OLFML2BQ68BL8 750 aa13.81□□□□□ -0.2
VPS13D-204ENST00000469054 RNF207Q6ZRF8 634 aa13.81□□□□□ -0.2
VPS13D-204ENST00000469054 FAM133AQ8N9E0 248 aa13.81□□□□□ -0.2
VPS13D-204ENST00000469054 ABHD8Q96I13 439 aa13.81□□□□□ -0.2
VPS13D-204ENST00000469054 MAML3Q96JK9 1138 aa13.81□□□□□ -0.2
VPS13D-204ENST00000469054 FLRT1Q9NZU1 646 aa13.81□□□□□ -0.2
VPS13D-204ENST00000469054 BIN2Q9UBW5 565 aaPredicted RBP13.81□□□□□ -0.2
VPS13D-204ENST00000469054 COL11A1P12107 1806 aaPredicted RBP13.8□□□□□ -0.2
VPS13D-204ENST00000469054 CPLX1O14810 134 aa13.8□□□□□ -0.2
VPS13D-204ENST00000469054 PRPF3O43395 683 aaKnown RBP13.8□□□□□ -0.2
VPS13D-204ENST00000469054 ST18O60284 1047 aa13.8□□□□□ -0.2
VPS13D-204ENST00000469054 IGHA2P01877 340 aa13.8□□□□□ -0.2
VPS13D-204ENST00000469054 INHAP05111 366 aa13.8□□□□□ -0.2
VPS13D-204ENST00000469054 CALML3P27482 149 aa13.8□□□□□ -0.2
VPS13D-204ENST00000469054 RPS6P62753 249 aaKnown RBP13.8□□□□□ -0.2
VPS13D-204ENST00000469054 CNTN2Q02246 1040 aa13.8□□□□□ -0.2
VPS13D-204ENST00000469054 MFSD14CQ5VZR4 134 aa13.8□□□□□ -0.2
VPS13D-204ENST00000469054 CPLX2Q6PUV4 134 aaKnown RBP13.8□□□□□ -0.2
VPS13D-204ENST00000469054 TBC1D5Q92609 795 aa13.8□□□□□ -0.2
VPS13D-204ENST00000469054 PHKBQ93100 1093 aa13.8□□□□□ -0.2
VPS13D-204ENST00000469054 ZNF333Q96JL9 665 aa13.8□□□□□ -0.2
VPS13D-204ENST00000469054 RBM27Q9P2N5 1060 aaKnown RBP13.8□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms