RNA–Protein interactions for RNA: ENST00000468894.1

XRN1-207, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 3

Gene XRN1, Length 318 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-207ENST00000468894 PDPK1O15530 556 aa8.36□□□□□ -1.07
XRN1-207ENST00000468894 PPP2R2AP63151 447 aa8.36□□□□□ -1.07
XRN1-207ENST00000468894 RASGRF1Q13972 1273 aa8.36□□□□□ -1.07
XRN1-207ENST00000468894 SNX17Q15036 470 aa8.36□□□□□ -1.07
XRN1-207ENST00000468894 CCDC113Q9H0I3 377 aa8.36□□□□□ -1.07
XRN1-207ENST00000468894 CWC22Q9HCG8 908 aaKnown RBP8.36□□□□□ -1.07
XRN1-207ENST00000468894 CYP26B1Q9NR63 512 aa8.36□□□□□ -1.07
XRN1-207ENST00000468894 IMPACTQ9P2X3 320 aa8.36□□□□□ -1.07
XRN1-207ENST00000468894 YBX2Q9Y2T7 364 aaKnown RBP8.36□□□□□ -1.07
XRN1-207ENST00000468894 AGRPO00253 132 aa8.35□□□□□ -1.07
XRN1-207ENST00000468894 THBDP07204 575 aa8.35□□□□□ -1.07
XRN1-207ENST00000468894 GRIA2P42262 883 aa8.35□□□□□ -1.07
XRN1-207ENST00000468894 HLA-DQA1Q5Y7H0 255 aa8.35□□□□□ -1.07
XRN1-207ENST00000468894 GALNT18Q6P9A2 607 aa8.35□□□□□ -1.07
XRN1-207ENST00000468894 SPATC1Q76KD6 591 aa8.35□□□□□ -1.07
XRN1-207ENST00000468894 GPRC5CQ9NQ84 441 aa8.35□□□□□ -1.07
XRN1-207ENST00000468894 FAM221BA6H8Z2 402 aa8.34□□□□□ -1.07
XRN1-207ENST00000468894 WTIPA6NIX2 430 aaPredicted RBP8.34□□□□□ -1.07
XRN1-207ENST00000468894 TBC1D8O95759 1140 aa8.34□□□□□ -1.07
XRN1-207ENST00000468894 GFRA1P56159 465 aa8.34□□□□□ -1.07
XRN1-207ENST00000468894 SF1Q15637 639 aaKnown RBP8.34□□□□□ -1.07
XRN1-207ENST00000468894 SIRT2Q8IXJ6 389 aa8.34□□□□□ -1.07
XRN1-207ENST00000468894 NPLOC4Q8TAT6 608 aa8.34□□□□□ -1.07
XRN1-207ENST00000468894 UBXN4Q92575 508 aa8.34□□□□□ -1.07
XRN1-207ENST00000468894 SGSM3Q96HU1 749 aa8.34□□□□□ -1.07
XRN1-207ENST00000468894 INTS4Q96HW7 963 aaKnown RBP8.34□□□□□ -1.07
XRN1-207ENST00000468894 DEPDC7Q96QD5 511 aa8.34□□□□□ -1.07
XRN1-207ENST00000468894 SNTG2Q9NY99 539 aa8.34□□□□□ -1.07
XRN1-207ENST00000468894 CLEC1BQ9P126 229 aa8.34□□□□□ -1.07
XRN1-207ENST00000468894 RNF114Q9Y508 228 aa8.34□□□□□ -1.07
XRN1-207ENST00000468894 PAX4O43316 350 aa8.33□□□□□ -1.08
XRN1-207ENST00000468894 SCG5P05408 212 aa8.33□□□□□ -1.08
XRN1-207ENST00000468894 SNRPB2P08579 225 aaKnown RBP8.33□□□□□ -1.08
XRN1-207ENST00000468894 MSL3P1P0C860 447 aa8.33□□□□□ -1.08
XRN1-207ENST00000468894 PLS3P13797 630 aa8.33□□□□□ -1.08
XRN1-207ENST00000468894 LAPTM5Q13571 262 aa8.33□□□□□ -1.08
XRN1-207ENST00000468894 SOGA3Q5TF21 947 aa8.33□□□□□ -1.08
XRN1-207ENST00000468894 MBLAC2Q68D91 279 aa8.33□□□□□ -1.08
XRN1-207ENST00000468894 JAMLQ86YT9 394 aa8.33□□□□□ -1.08
XRN1-207ENST00000468894 NUP43Q8NFH3 380 aa8.33□□□□□ -1.08
XRN1-207ENST00000468894 FRS2Q8WU20 508 aa8.33□□□□□ -1.08
XRN1-207ENST00000468894 ZNF669Q96BR6 464 aaPredicted RBP8.33□□□□□ -1.08
XRN1-207ENST00000468894 C1orf159Q96HA4 380 aa8.33□□□□□ -1.08
XRN1-207ENST00000468894 FMNL2Q96PY5 1086 aa8.33□□□□□ -1.08
XRN1-207ENST00000468894 SLC6A17Q9H1V8 727 aa8.33□□□□□ -1.08
XRN1-207ENST00000468894 CRTAC1Q9NQ79 661 aa8.33□□□□□ -1.08
XRN1-207ENST00000468894 ARHGEF4Q9NR80 690 aa8.33□□□□□ -1.08
XRN1-207ENST00000468894 ACSL6Q9UKU0 697 aa8.33□□□□□ -1.08
XRN1-207ENST00000468894 PRKCAP17252 672 aa8.32□□□□□ -1.08
XRN1-207ENST00000468894 HOXC12P31275 282 aa8.32□□□□□ -1.08
XRN1-207ENST00000468894 MVKQ03426 396 aa8.32□□□□□ -1.08
XRN1-207ENST00000468894 PRSS53Q2L4Q9 553 aa8.32□□□□□ -1.08
XRN1-207ENST00000468894 MTERF2Q49AM1 385 aa8.32□□□□□ -1.08
XRN1-207ENST00000468894 MPZL3Q6UWV2 235 aa8.32□□□□□ -1.08
XRN1-207ENST00000468894 PRR23BQ6ZRT6 265 aa8.32□□□□□ -1.08
XRN1-207ENST00000468894 CPNE8Q86YQ8 564 aa8.32□□□□□ -1.08
XRN1-207ENST00000468894 OSBPL2Q9H1P3 480 aa8.32□□□□□ -1.08
XRN1-207ENST00000468894 NPHP3-ACAD11A0A0J9YXS1 232 aa8.31□□□□□ -1.08
XRN1-207ENST00000468894 IQCA1LA6NCM1 817 aa8.31□□□□□ -1.08
XRN1-207ENST00000468894 DIAPH1O60610 1272 aaKnown RBP8.31□□□□□ -1.08
XRN1-207ENST00000468894 PAMP19021 973 aa8.31□□□□□ -1.08
XRN1-207ENST00000468894 L1CAMP32004 1257 aa8.31□□□□□ -1.08
XRN1-207ENST00000468894 ECI1P42126 302 aa8.31□□□□□ -1.08
XRN1-207ENST00000468894 MLANAQ16655 118 aa8.31□□□□□ -1.08
XRN1-207ENST00000468894 LRP10Q7Z4F1 713 aa8.31□□□□□ -1.08
XRN1-207ENST00000468894 LRRC47Q8N1G4 583 aaKnown RBP8.31□□□□□ -1.08
XRN1-207ENST00000468894 TMEM145Q8NBT3 493 aa8.31□□□□□ -1.08
XRN1-207ENST00000468894 KREMEN2Q8NCW0 462 aa8.31□□□□□ -1.08
XRN1-207ENST00000468894 MKL1Q969V6 931 aa8.31□□□□□ -1.08
XRN1-207ENST00000468894 AARSD1Q9BTE6 412 aaKnown RBP8.31□□□□□ -1.08
XRN1-207ENST00000468894 PFDN2Q9UHV9 154 aa8.31□□□□□ -1.08
XRN1-207ENST00000468894 TRBV23OR9-2A0A075B6M9 112 aa8.3□□□□□ -1.08
XRN1-207ENST00000468894 LRRC10BA6NIK2 292 aa8.3□□□□□ -1.08
XRN1-207ENST00000468894 ADCY3O60266 1144 aa8.3□□□□□ -1.08
XRN1-207ENST00000468894 PNLIPP16233 465 aa8.3□□□□□ -1.08
XRN1-207ENST00000468894 YOD1Q5VVQ6 348 aaPredicted RBP8.3□□□□□ -1.08
XRN1-207ENST00000468894 DENND5AQ6IQ26 1287 aa8.3□□□□□ -1.08
XRN1-207ENST00000468894 IRF2BP1Q8IU81 584 aa8.3□□□□□ -1.08
XRN1-207ENST00000468894 CCDC103Q8IW40 242 aa8.3□□□□□ -1.08
XRN1-207ENST00000468894 SRPK1Q96SB4 655 aaKnown RBP8.3□□□□□ -1.08
XRN1-207ENST00000468894 DIRC2Q96SL1 478 aa8.3□□□□□ -1.08
XRN1-207ENST00000468894 MMP19Q99542 508 aa8.3□□□□□ -1.08
XRN1-207ENST00000468894 IER2Q9BTL4 223 aa8.3□□□□□ -1.08
XRN1-207ENST00000468894 SPATA9Q9BWV2 254 aa8.3□□□□□ -1.08
XRN1-207ENST00000468894 TNFRSF12AQ9NP84 129 aa8.3□□□□□ -1.08
XRN1-207ENST00000468894 TMEFF2Q9UIK5 374 aaPredicted RBP8.3□□□□□ -1.08
XRN1-207ENST00000468894 ARNTLO00327 626 aa8.29□□□□□ -1.08
XRN1-207ENST00000468894 CPP00450 1065 aa8.29□□□□□ -1.08
XRN1-207ENST00000468894 SDHBP21912 280 aa8.29□□□□□ -1.08
XRN1-207ENST00000468894 KCNJ6P48051 423 aa8.29□□□□□ -1.08
XRN1-207ENST00000468894 CORO7P57737 925 aa8.29□□□□□ -1.08
XRN1-207ENST00000468894 SSRP1Q08945 709 aaKnown RBP8.29□□□□□ -1.08
XRN1-207ENST00000468894 HSP90AA2PQ14568 343 aaPredicted RBP8.29□□□□□ -1.08
XRN1-207ENST00000468894 SLC35F1Q5T1Q4 408 aa8.29□□□□□ -1.08
XRN1-207ENST00000468894 ADGRF1Q5T601 910 aa8.29□□□□□ -1.08
XRN1-207ENST00000468894 OGFOD2Q6N063 350 aa8.29□□□□□ -1.08
XRN1-207ENST00000468894 CCDC140Q96MF4 163 aa8.29□□□□□ -1.08
XRN1-207ENST00000468894 LNPKQ9C0E8 428 aa8.29□□□□□ -1.08
XRN1-207ENST00000468894 NSUN3Q9H649 340 aaKnown RBP8.29□□□□□ -1.08
XRN1-207ENST00000468894 FAM53CQ9NYF3 392 aa8.29□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms