RNA–Protein interactions for RNA: ENST00000468807.1

TTC28-204, Transcript of tetratricopeptide repeat domain 28, humanhuman

TSL 2

Gene TTC28, Length 594 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC28-204ENST00000468807 BTNL9Q6UXG8 535 aa25.59■■□□□ 1.69
TTC28-204ENST00000468807 KLHDC9Q8NEP7 349 aa25.59■■□□□ 1.69
TTC28-204ENST00000468807 BADQ92934 168 aa25.59■■□□□ 1.69
TTC28-204ENST00000468807 DDX49Q9Y6V7 483 aaKnown RBP25.59■■□□□ 1.69
TTC28-204ENST00000468807 TRIM43BA6NCK2 446 aa25.58■■□□□ 1.69
TTC28-204ENST00000468807 MOXD2PA6NHM9 499 aa25.58■■□□□ 1.69
TTC28-204ENST00000468807 KDM4AO75164 1064 aa25.58■■□□□ 1.69
TTC28-204ENST00000468807 CLTBP09497 229 aa25.58■■□□□ 1.69
TTC28-204ENST00000468807 PDE4AP27815 886 aa25.58■■□□□ 1.69
TTC28-204ENST00000468807 EEPD1Q7L9B9 569 aa25.58■■□□□ 1.69
TTC28-204ENST00000468807 IQCA1Q86XH1 822 aa25.58■■□□□ 1.69
TTC28-204ENST00000468807 VTI1AQ96AJ9 217 aa25.58■■□□□ 1.69
TTC28-204ENST00000468807 TRIM43Q96BQ3 446 aaPredicted RBP25.58■■□□□ 1.69
TTC28-204ENST00000468807 DSCC1Q9BVC3 393 aa25.58■■□□□ 1.69
TTC28-204ENST00000468807 B4E1Z4 1266 aa25.57■■□□□ 1.68
TTC28-204ENST00000468807 GOLGA8HP0CJ92 632 aa25.57■■□□□ 1.68
TTC28-204ENST00000468807 TNFAIP2Q03169 654 aa25.57■■□□□ 1.68
TTC28-204ENST00000468807 ZNF543Q08ER8 600 aa25.57■■□□□ 1.68
TTC28-204ENST00000468807 GNASQ5JWF2 1037 aa25.57■■□□□ 1.68
TTC28-204ENST00000468807 GLT1D1Q96MS3 346 aa25.57■■□□□ 1.68
TTC28-204ENST00000468807 PURBQ96QR8 312 aaKnown RBP25.57■■□□□ 1.68
TTC28-204ENST00000468807 KATNBL1Q9H079 304 aa25.57■■□□□ 1.68
TTC28-204ENST00000468807 CTNNA3Q9UI47 895 aa25.57■■□□□ 1.68
TTC28-204ENST00000468807 C11orf97A0A1B0GVM6 126 aaPredicted RBP25.56■■□□□ 1.68
TTC28-204ENST00000468807 PTPDC1A2A3K4 754 aa25.56■■□□□ 1.68
TTC28-204ENST00000468807 BAATQ14032 418 aaPredicted RBP25.56■■□□□ 1.68
TTC28-204ENST00000468807 TTC22Q5TAA0 569 aa25.56■■□□□ 1.68
TTC28-204ENST00000468807 Q7L0L9 218 aa25.56■■□□□ 1.68
TTC28-204ENST00000468807 PCSK9Q8NBP7 692 aaKnown RBP25.56■■□□□ 1.68
TTC28-204ENST00000468807 KAT14Q9H8E8 782 aa25.56■■□□□ 1.68
TTC28-204ENST00000468807 ASTN1O14525 1302 aa25.56■■□□□ 1.68
TTC28-204ENST00000468807 NFIBO00712 420 aa25.55■■□□□ 1.68
TTC28-204ENST00000468807 ASGR1P07306 291 aa25.55■■□□□ 1.68
TTC28-204ENST00000468807 GSPT1P15170 499 aaKnown RBP25.55■■□□□ 1.68
TTC28-204ENST00000468807 CST5P28325 142 aaPredicted RBP25.55■■□□□ 1.68
TTC28-204ENST00000468807 GJA9P57773 515 aa25.55■■□□□ 1.68
TTC28-204ENST00000468807 CCSAPQ6IQ19 270 aaPredicted RBP25.55■■□□□ 1.68
TTC28-204ENST00000468807 DGKHQ86XP1 1220 aa25.55■■□□□ 1.68
TTC28-204ENST00000468807 FBXO16Q8IX29 292 aaPredicted RBP25.55■■□□□ 1.68
TTC28-204ENST00000468807 DEFB123Q8N688 67 aa25.55■■□□□ 1.68
TTC28-204ENST00000468807 UPF3AQ9H1J1 476 aaKnown RBP25.55■■□□□ 1.68
TTC28-204ENST00000468807 TMEM39AQ9NV64 488 aa25.55■■□□□ 1.68
TTC28-204ENST00000468807 LCTP09848 1927 aa25.55■■□□□ 1.68
TTC28-204ENST00000468807 LRRC37A2A6NM11 1700 aa25.54■■□□□ 1.68
TTC28-204ENST00000468807 CCDC178Q5BJE1 867 aa25.54■■□□□ 1.68
TTC28-204ENST00000468807 PNMA1Q8ND90 353 aa25.54■■□□□ 1.68
TTC28-204ENST00000468807 COL6A3P12111 3177 aa25.53■■□□□ 1.68
TTC28-204ENST00000468807 DCDC2CA8MYV0 355 aa25.53■■□□□ 1.68
TTC28-204ENST00000468807 SNHG28P0DPA3 235 aa25.53■■□□□ 1.68
TTC28-204ENST00000468807 RAG1P15918 1043 aa25.53■■□□□ 1.68
TTC28-204ENST00000468807 CALML3P27482 149 aa25.53■■□□□ 1.68
TTC28-204ENST00000468807 NT5C2P49902 561 aa25.53■■□□□ 1.68
TTC28-204ENST00000468807 BEX3Q00994 111 aa25.53■■□□□ 1.68
TTC28-204ENST00000468807 GPATCH4Q5T3I0 446 aaKnown RBP25.53■■□□□ 1.68
TTC28-204ENST00000468807 GPR153Q6NV75 609 aa25.53■■□□□ 1.68
TTC28-204ENST00000468807 TLK2Q86UE8 772 aa25.53■■□□□ 1.68
TTC28-204ENST00000468807 ZSCAN10Q96SZ4 725 aaPredicted RBP25.53■■□□□ 1.68
TTC28-204ENST00000468807 UBA5Q9GZZ9 404 aa25.53■■□□□ 1.68
TTC28-204ENST00000468807 IL25Q9H293 177 aa25.53■■□□□ 1.68
TTC28-204ENST00000468807 CPVLQ9H3G5 476 aa25.53■■□□□ 1.68
TTC28-204ENST00000468807 PDGFCQ9NRA1 345 aa25.53■■□□□ 1.68
TTC28-204ENST00000468807 USH1GQ495M9 461 aa25.52■■□□□ 1.68
TTC28-204ENST00000468807 SLC30A10Q6XR72 485 aa25.52■■□□□ 1.68
TTC28-204ENST00000468807 KRT23Q9C075 422 aa25.52■■□□□ 1.68
TTC28-204ENST00000468807 AP5M1Q9H0R1 490 aa25.52■■□□□ 1.68
TTC28-204ENST00000468807 ZSWIM5Q9P217 1185 aa25.52■■□□□ 1.68
TTC28-204ENST00000468807 ADD3Q9UEY8 706 aaKnown RBP25.52■■□□□ 1.68
TTC28-204ENST00000468807 PNMA2Q9UL42 364 aa25.52■■□□□ 1.68
TTC28-204ENST00000468807 PTGS1P23219 599 aa25.51■■□□□ 1.67
TTC28-204ENST00000468807 ITGB8P26012 769 aa25.51■■□□□ 1.67
TTC28-204ENST00000468807 SHHQ15465 462 aa25.51■■□□□ 1.67
TTC28-204ENST00000468807 RNF207Q6ZRF8 634 aa25.51■■□□□ 1.67
TTC28-204ENST00000468807 ANKRD33Q7Z3H0 272 aa25.51■■□□□ 1.67
TTC28-204ENST00000468807 UBAC1Q9BSL1 405 aa25.51■■□□□ 1.67
TTC28-204ENST00000468807 CNNM2Q9H8M5 875 aa25.51■■□□□ 1.67
TTC28-204ENST00000468807 ELP1O95163 1332 aa25.51■■□□□ 1.67
TTC28-204ENST00000468807 TNKSO95271 1327 aa25.51■■□□□ 1.67
TTC28-204ENST00000468807 KIAA0355O15063 1070 aa25.5■■□□□ 1.67
TTC28-204ENST00000468807 DYNC1LI2O43237 492 aaPredicted RBP25.5■■□□□ 1.67
TTC28-204ENST00000468807 SMPD1P17405 629 aa25.5■■□□□ 1.67
TTC28-204ENST00000468807 ALDH5A1P51649 535 aaPredicted RBP25.5■■□□□ 1.67
TTC28-204ENST00000468807 FAAP100Q0VG06 881 aa25.5■■□□□ 1.67
TTC28-204ENST00000468807 C9orf50Q5SZB4 431 aa25.5■■□□□ 1.67
TTC28-204ENST00000468807 KIAA1211Q6ZU35 1233 aa25.5■■□□□ 1.67
TTC28-204ENST00000468807 ENAHQ8N8S7 591 aaPredicted RBP25.5■■□□□ 1.67
TTC28-204ENST00000468807 CLEC4DQ8WXI8 215 aa25.5■■□□□ 1.67
TTC28-204ENST00000468807 TOX2Q96NM4 488 aa25.5■■□□□ 1.67
TTC28-204ENST00000468807 VTA1Q9NP79 307 aa25.5■■□□□ 1.67
TTC28-204ENST00000468807 GNEQ9Y223 722 aaKnown RBP25.5■■□□□ 1.67
TTC28-204ENST00000468807 MROH7Q68CQ1 1323 aa25.49■■□□□ 1.67
TTC28-204ENST00000468807 WDR19Q8NEZ3 1342 aa25.49■■□□□ 1.67
TTC28-204ENST00000468807 A0A0U1RQG5 324 aaPredicted RBP25.49■■□□□ 1.67
TTC28-204ENST00000468807 DHX16O60231 1041 aaKnown RBP25.49■■□□□ 1.67
TTC28-204ENST00000468807 TAPT1Q6NXT6 567 aa25.49■■□□□ 1.67
TTC28-204ENST00000468807 RUFY2Q8WXA3 655 aa25.49■■□□□ 1.67
TTC28-204ENST00000468807 RAD50Q92878 1312 aa25.48■■□□□ 1.67
TTC28-204ENST00000468807 CTAGE5O15320 804 aa25.48■■□□□ 1.67
TTC28-204ENST00000468807 CDC37Q16543 378 aaPredicted RBP25.48■■□□□ 1.67
TTC28-204ENST00000468807 FSCN1Q16658 493 aaKnown RBP25.48■■□□□ 1.67
TTC28-204ENST00000468807 IQSEC1Q6DN90 963 aa25.48■■□□□ 1.67
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms