RNA–Protein interactions for RNA: ENST00000467819.5

COL9A3-207, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 1 (best)

Gene COL9A3, Length 993 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-207ENST00000467819 FGRP09769 529 aa24.87■■□□□ 1.57
COL9A3-207ENST00000467819 SLC16A2P36021 539 aa24.87■■□□□ 1.57
COL9A3-207ENST00000467819 NOVP48745 357 aa24.87■■□□□ 1.57
COL9A3-207ENST00000467819 BEX3Q00994 111 aa24.87■■□□□ 1.57
COL9A3-207ENST00000467819 TNFAIP2Q03169 654 aa24.87■■□□□ 1.57
COL9A3-207ENST00000467819 TTBK2Q6IQ55 1244 aa24.87■■□□□ 1.57
COL9A3-207ENST00000467819 ZNF589Q86UQ0 364 aaPredicted RBP24.87■■□□□ 1.57
COL9A3-207ENST00000467819 CYP39A1Q9NYL5 469 aa24.87■■□□□ 1.57
COL9A3-207ENST00000467819 ASTN1O14525 1302 aa24.86■■□□□ 1.57
COL9A3-207ENST00000467819 A0A0U1RQG5 324 aaPredicted RBP24.86■■□□□ 1.57
COL9A3-207ENST00000467819 CTAGE5O15320 804 aa24.86■■□□□ 1.57
COL9A3-207ENST00000467819 HSPD1P10809 573 aaKnown RBP24.86■■□□□ 1.57
COL9A3-207ENST00000467819 HAND2P61296 217 aa24.86■■□□□ 1.57
COL9A3-207ENST00000467819 NSMFQ6X4W1 530 aa24.86■■□□□ 1.57
COL9A3-207ENST00000467819 RILPL2Q969X0 211 aa24.86■■□□□ 1.57
COL9A3-207ENST00000467819 TBX21Q9UL17 535 aa24.86■■□□□ 1.57
COL9A3-207ENST00000467819 FRMPD2Q68DX3 1309 aaPredicted RBP24.86■■□□□ 1.57
COL9A3-207ENST00000467819 LAMA4Q16363 1823 aa24.85■■□□□ 1.57
COL9A3-207ENST00000467819 TIMP1P01033 207 aa24.85■■□□□ 1.57
COL9A3-207ENST00000467819 TOP1P11387 765 aaKnown RBP24.85■■□□□ 1.57
COL9A3-207ENST00000467819 CDK7P50613 346 aa24.85■■□□□ 1.57
COL9A3-207ENST00000467819 EEPD1Q7L9B9 569 aa24.85■■□□□ 1.57
COL9A3-207ENST00000467819 TMEM47Q9BQJ4 181 aa24.85■■□□□ 1.57
COL9A3-207ENST00000467819 RANBP17Q9H2T7 1088 aaKnown RBP24.85■■□□□ 1.57
COL9A3-207ENST00000467819 SEMA6BQ9H3T3 888 aa24.85■■□□□ 1.57
COL9A3-207ENST00000467819 GPCPD1Q9NPB8 672 aa24.85■■□□□ 1.57
COL9A3-207ENST00000467819 CCDC171Q6TFL3 1326 aa24.85■■□□□ 1.57
COL9A3-207ENST00000467819 EYSQ5T1H1 3165 aa24.85■■□□□ 1.57
COL9A3-207ENST00000467819 ARVCFO00192 962 aa24.84■■□□□ 1.57
COL9A3-207ENST00000467819 ICAM1P05362 532 aa24.84■■□□□ 1.57
COL9A3-207ENST00000467819 PTGS1P23219 599 aa24.84■■□□□ 1.57
COL9A3-207ENST00000467819 SYDE2Q5VT97 1194 aa24.84■■□□□ 1.57
COL9A3-207ENST00000467819 B4GALNT3Q6L9W6 998 aa24.84■■□□□ 1.57
COL9A3-207ENST00000467819 TLK2Q86UE8 772 aa24.84■■□□□ 1.57
COL9A3-207ENST00000467819 FBXO16Q8IX29 292 aaPredicted RBP24.84■■□□□ 1.57
COL9A3-207ENST00000467819 PURBQ96QR8 312 aaKnown RBP24.84■■□□□ 1.57
COL9A3-207ENST00000467819 CDX2Q99626 313 aaPredicted RBP24.84■■□□□ 1.57
COL9A3-207ENST00000467819 ZMYM6O95789 1325 aa24.84■■□□□ 1.57
COL9A3-207ENST00000467819 TTYH1Q9H313 450 aaPredicted RBP24.83■■□□□ 1.57
COL9A3-207ENST00000467819 PDGFCQ9NRA1 345 aa24.83■■□□□ 1.57
COL9A3-207ENST00000467819 GNEQ9Y223 722 aaKnown RBP24.83■■□□□ 1.57
COL9A3-207ENST00000467819 CXCL17Q6UXB2 119 aa24.82■■□□□ 1.56
COL9A3-207ENST00000467819 BTNL9Q6UXG8 535 aa24.82■■□□□ 1.56
COL9A3-207ENST00000467819 YTHDC1Q96MU7 727 aaKnown RBP24.82■■□□□ 1.56
COL9A3-207ENST00000467819 AP5M1Q9H0R1 490 aa24.82■■□□□ 1.56
COL9A3-207ENST00000467819 TCP11L1Q9NUJ3 509 aa24.82■■□□□ 1.56
COL9A3-207ENST00000467819 TLR3O15455 904 aaKnown RBP24.81■■□□□ 1.56
COL9A3-207ENST00000467819 DYNC1LI2O43237 492 aaPredicted RBP24.81■■□□□ 1.56
COL9A3-207ENST00000467819 SMPD1P17405 629 aa24.81■■□□□ 1.56
COL9A3-207ENST00000467819 NKX3-2P78367 333 aa24.81■■□□□ 1.56
COL9A3-207ENST00000467819 MFSD5Q6N075 450 aa24.81■■□□□ 1.56
COL9A3-207ENST00000467819 TICAM2Q86XR7 235 aa24.81■■□□□ 1.56
COL9A3-207ENST00000467819 FAM126BQ8IXS8 530 aa24.81■■□□□ 1.56
COL9A3-207ENST00000467819 PPP1R12CQ9BZL4 782 aa24.81■■□□□ 1.56
COL9A3-207ENST00000467819 NFIBO00712 420 aa24.8■■□□□ 1.56
COL9A3-207ENST00000467819 PDHBP11177 359 aa24.8■■□□□ 1.56
COL9A3-207ENST00000467819 BAATQ14032 418 aaPredicted RBP24.8■■□□□ 1.56
COL9A3-207ENST00000467819 FSCN1Q16658 493 aaKnown RBP24.8■■□□□ 1.56
COL9A3-207ENST00000467819 AKNAD1Q5T1N1 836 aa24.8■■□□□ 1.56
COL9A3-207ENST00000467819 TMEM63BQ5T3F8 832 aa24.8■■□□□ 1.56
COL9A3-207ENST00000467819 TAPT1Q6NXT6 567 aa24.8■■□□□ 1.56
COL9A3-207ENST00000467819 MFSD6Q6ZSS7 791 aa24.8■■□□□ 1.56
COL9A3-207ENST00000467819 TBC1D10CQ8IV04 446 aa24.8■■□□□ 1.56
COL9A3-207ENST00000467819 MYLIPQ8WY64 445 aa24.8■■□□□ 1.56
COL9A3-207ENST00000467819 BUD13Q9BRD0 619 aaKnown RBP eCLIP24.8■■□□□ 1.565e-22■□□□□ 10.1
COL9A3-207ENST00000467819 MYH6P13533 1939 aa24.79■■□□□ 1.56
COL9A3-207ENST00000467819 PPIGQ13427 754 aaKnown RBP eCLIP24.79■■□□□ 1.567e-25■■□□□ 13
COL9A3-207ENST00000467819 IQSEC1Q6DN90 963 aa24.79■■□□□ 1.56
COL9A3-207ENST00000467819 PHF6Q8IWS0 365 aaKnown RBP eCLIP24.79■■□□□ 1.56
COL9A3-207ENST00000467819 SMC5Q8IY18 1101 aa24.79■■□□□ 1.56
COL9A3-207ENST00000467819 RWDD1Q9H446 243 aaPredicted RBP24.79■■□□□ 1.56
COL9A3-207ENST00000467819 VTA1Q9NP79 307 aa24.79■■□□□ 1.56
COL9A3-207ENST00000467819 PTPDC1A2A3K4 754 aa24.78■■□□□ 1.56
COL9A3-207ENST00000467819 CSF2RAP15509 400 aa24.78■■□□□ 1.56
COL9A3-207ENST00000467819 SDSP20132 328 aa24.78■■□□□ 1.56
COL9A3-207ENST00000467819 MFAP1P55081 439 aaKnown RBP24.78■■□□□ 1.56
COL9A3-207ENST00000467819 KIAA1211Q6ZU35 1233 aa24.78■■□□□ 1.56
COL9A3-207ENST00000467819 ADD3Q9UEY8 706 aaKnown RBP24.78■■□□□ 1.56
COL9A3-207ENST00000467819 ZEB2O60315 1214 aa24.77■■□□□ 1.56
COL9A3-207ENST00000467819 CABYRO75952 493 aa24.77■■□□□ 1.56
COL9A3-207ENST00000467819 ALDH5A1P51649 535 aaPredicted RBP24.77■■□□□ 1.56
COL9A3-207ENST00000467819 AAMPQ13685 434 aa24.77■■□□□ 1.56
COL9A3-207ENST00000467819 SLC30A10Q6XR72 485 aa24.77■■□□□ 1.56
COL9A3-207ENST00000467819 CHD1LQ86WJ1 897 aa24.77■■□□□ 1.56
COL9A3-207ENST00000467819 TMEM199Q8N511 208 aa24.77■■□□□ 1.56
COL9A3-207ENST00000467819 MAFAQ8NHW3 353 aaPredicted RBP24.77■■□□□ 1.56
COL9A3-207ENST00000467819 MORC4Q8TE76 937 aa24.77■■□□□ 1.56
COL9A3-207ENST00000467819 NEDD4P46934 1319 aa24.77■■□□□ 1.56
COL9A3-207ENST00000467819 MYO9BQ13459 2157 aa24.76■■□□□ 1.55
COL9A3-207ENST00000467819 HSFX4A0A1B0GTS1 333 aaPredicted RBP24.76■■□□□ 1.55
COL9A3-207ENST00000467819 HSFX3A0A1B0GWH4 333 aaPredicted RBP24.76■■□□□ 1.55
COL9A3-207ENST00000467819 CD4P01730 458 aa24.76■■□□□ 1.55
COL9A3-207ENST00000467819 ACRP10323 421 aa24.76■■□□□ 1.55
COL9A3-207ENST00000467819 PCP11498 1178 aaKnown RBP24.76■■□□□ 1.55
COL9A3-207ENST00000467819 DNAJB2P25686 324 aa24.76■■□□□ 1.55
COL9A3-207ENST00000467819 CALML3P27482 149 aa24.76■■□□□ 1.55
COL9A3-207ENST00000467819 CYP2C18P33260 490 aa24.76■■□□□ 1.55
COL9A3-207ENST00000467819 ZNF543Q08ER8 600 aa24.76■■□□□ 1.55
COL9A3-207ENST00000467819 ITGA7Q13683 1181 aa24.76■■□□□ 1.55
COL9A3-207ENST00000467819 TMEM240Q5SV17 173 aa24.76■■□□□ 1.55
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms