RNA–Protein interactions for RNA: ENST00000467731.1

SCAF4-204, Transcript of SR-related CTD associated factor 4, humanhuman

TSL 1 (best)

Gene SCAF4, Length 2,976 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF4-204ENST00000467731 ICAM1P05362 532 aa7.89□□□□□ -1.15
SCAF4-204ENST00000467731 FDX1P10109 184 aa7.89□□□□□ -1.15
SCAF4-204ENST00000467731 NOGQ13253 232 aa7.89□□□□□ -1.15
SCAF4-204ENST00000467731 TRIM29Q14134 588 aa7.89□□□□□ -1.15
SCAF4-204ENST00000467731 TMEM132BQ14DG7 1078 aa7.89□□□□□ -1.15
SCAF4-204ENST00000467731 LBX2Q6XYB7 198 aa7.89□□□□□ -1.15
SCAF4-204ENST00000467731 ZNF713Q8N859 430 aaPredicted RBP7.89□□□□□ -1.15
SCAF4-204ENST00000467731 SMCR8Q8TEV9 937 aaPredicted RBP7.89□□□□□ -1.15
SCAF4-204ENST00000467731 SH3GLB2Q9NR46 395 aa7.89□□□□□ -1.15
SCAF4-204ENST00000467731 RBBP6Q7Z6E9 1792 aaKnown RBP7.89□□□□□ -1.15
SCAF4-204ENST00000467731 MMP1P03956 469 aa7.89□□□□□ -1.15
SCAF4-204ENST00000467731 INHBEP58166 350 aa7.89□□□□□ -1.15
SCAF4-204ENST00000467731 KIF23Q02241 960 aaPredicted RBP7.89□□□□□ -1.15
SCAF4-204ENST00000467731 SREBF2Q12772 1141 aa7.89□□□□□ -1.15
SCAF4-204ENST00000467731 PLS1Q14651 629 aa7.89□□□□□ -1.15
SCAF4-204ENST00000467731 FOXD4L5Q5VV16 416 aaPredicted RBP7.89□□□□□ -1.15
SCAF4-204ENST00000467731 RGS22Q8NE09 1264 aa7.89□□□□□ -1.15
SCAF4-204ENST00000467731 CCDC148Q8NFR7 591 aa7.89□□□□□ -1.15
SCAF4-204ENST00000467731 FOXD4L4Q8WXT5 416 aaPredicted RBP7.89□□□□□ -1.15
SCAF4-204ENST00000467731 PAGR1Q9BTK6 254 aa7.89□□□□□ -1.15
SCAF4-204ENST00000467731 PHF20Q9BVI0 1012 aa7.89□□□□□ -1.15
SCAF4-204ENST00000467731 BTBD7Q9P203 1132 aa7.89□□□□□ -1.15
SCAF4-204ENST00000467731 KCNG1Q9UIX4 513 aa7.89□□□□□ -1.15
SCAF4-204ENST00000467731 CCPG1Q9ULG6 757 aa7.89□□□□□ -1.15
SCAF4-204ENST00000467731 MTMR6Q9Y217 621 aa7.89□□□□□ -1.15
SCAF4-204ENST00000467731 NLRP5P59047 1200 aa7.88□□□□□ -1.15
SCAF4-204ENST00000467731 NPY5RQ15761 445 aa7.88□□□□□ -1.15
SCAF4-204ENST00000467731 IFNL1Q8IU54 200 aa7.88□□□□□ -1.15
SCAF4-204ENST00000467731 CCDC12Q8WUD4 166 aaPredicted RBP7.88□□□□□ -1.15
SCAF4-204ENST00000467731 ZMYND12Q9H0C1 365 aa7.88□□□□□ -1.15
SCAF4-204ENST00000467731 TXNRD2Q9NNW7 524 aa7.88□□□□□ -1.15
SCAF4-204ENST00000467731 HOMER2Q9NSB8 354 aa7.88□□□□□ -1.15
SCAF4-204ENST00000467731 ZDHHC9Q9Y397 364 aa7.88□□□□□ -1.15
SCAF4-204ENST00000467731 MYH15Q9Y2K3 1946 aa7.88□□□□□ -1.15
SCAF4-204ENST00000467731 SMCO2A6NFE2 343 aa7.88□□□□□ -1.15
SCAF4-204ENST00000467731 ATP2A1O14983 1001 aa7.88□□□□□ -1.15
SCAF4-204ENST00000467731 ADAMTS3O15072 1205 aa7.88□□□□□ -1.15
SCAF4-204ENST00000467731 TM4SF4P48230 202 aa7.88□□□□□ -1.15
SCAF4-204ENST00000467731 OAZ1P54368 228 aa7.88□□□□□ -1.15
SCAF4-204ENST00000467731 MCTP1Q6DN14 999 aa7.88□□□□□ -1.15
SCAF4-204ENST00000467731 SNRNP48Q6IEG0 339 aaKnown RBP7.88□□□□□ -1.15
SCAF4-204ENST00000467731 FERMT3Q86UX7 667 aa7.88□□□□□ -1.15
SCAF4-204ENST00000467731 MB21D1Q8N884 522 aa7.88□□□□□ -1.15
SCAF4-204ENST00000467731 PARK7Q99497 189 aaKnown RBP7.88□□□□□ -1.15
SCAF4-204ENST00000467731 TEX13BQ9BXU2 312 aa7.88□□□□□ -1.15
SCAF4-204ENST00000467731 CHMP5Q9NZZ3 219 aa7.88□□□□□ -1.15
SCAF4-204ENST00000467731 CIZ1Q9ULV3 898 aaPredicted RBP7.88□□□□□ -1.15
SCAF4-204ENST00000467731 RIPK3Q9Y572 518 aa7.88□□□□□ -1.15
SCAF4-204ENST00000467731 WDR33Q9C0J8 1336 aaKnown RBP7.88□□□□□ -1.15
SCAF4-204ENST00000467731 BRCA2P51587 3418 aa7.88□□□□□ -1.15
SCAF4-204ENST00000467731 DOCK3Q8IZD9 2030 aa7.87□□□□□ -1.15
SCAF4-204ENST00000467731 OPLAHO14841 1288 aa7.87□□□□□ -1.15
SCAF4-204ENST00000467731 CNMDO75829 334 aa7.87□□□□□ -1.15
SCAF4-204ENST00000467731 BRD1O95696 1058 aa7.87□□□□□ -1.15
SCAF4-204ENST00000467731 ALAS1P13196 640 aa7.87□□□□□ -1.15
SCAF4-204ENST00000467731 CLCN1P35523 988 aa7.87□□□□□ -1.15
SCAF4-204ENST00000467731 STAT3P40763 770 aa7.87□□□□□ -1.15
SCAF4-204ENST00000467731 VEGFBP49765 207 aa7.87□□□□□ -1.15
SCAF4-204ENST00000467731 NUCB2P80303 420 aa7.87□□□□□ -1.15
SCAF4-204ENST00000467731 NR5A1Q13285 461 aa7.87□□□□□ -1.15
SCAF4-204ENST00000467731 PPP1R18Q6NYC8 613 aa7.87□□□□□ -1.15
SCAF4-204ENST00000467731 DIS3L2Q8IYB7 885 aaKnown RBP7.87□□□□□ -1.15
SCAF4-204ENST00000467731 OXER1Q8TDS5 423 aa7.87□□□□□ -1.15
SCAF4-204ENST00000467731 RBPJLQ9UBG7 517 aa7.87□□□□□ -1.15
SCAF4-204ENST00000467731 HTTP42858 3142 aa7.87□□□□□ -1.15
SCAF4-204ENST00000467731 ZNFX1Q9P2E3 1918 aaKnown RBP7.87□□□□□ -1.15
SCAF4-204ENST00000467731 ESYT2A0FGR8 921 aa7.87□□□□□ -1.15
SCAF4-204ENST00000467731 MYH7BA7E2Y1 1941 aa7.87□□□□□ -1.15
SCAF4-204ENST00000467731 BTBD18B2RXH4 712 aa7.87□□□□□ -1.15
SCAF4-204ENST00000467731 KIF28PB7ZC32 967 aa7.87□□□□□ -1.15
SCAF4-204ENST00000467731 ZSCAN22P10073 491 aaPredicted RBP7.87□□□□□ -1.15
SCAF4-204ENST00000467731 GNA11P29992 359 aa7.87□□□□□ -1.15
SCAF4-204ENST00000467731 C1QTNF8P60827 252 aa7.87□□□□□ -1.15
SCAF4-204ENST00000467731 TAF1CQ15572 869 aaPredicted RBP7.87□□□□□ -1.15
SCAF4-204ENST00000467731 ANKRD13CQ8N6S4 541 aa7.87□□□□□ -1.15
SCAF4-204ENST00000467731 SPATC1LQ9H0A9 340 aa7.87□□□□□ -1.15
SCAF4-204ENST00000467731 C6orf50Q9HD87 102 aa7.87□□□□□ -1.15
SCAF4-204ENST00000467731 ZCCHC17Q9NP64 241 aaKnown RBP7.87□□□□□ -1.15
SCAF4-204ENST00000467731 PCDHA4Q9UN74 947 aa7.87□□□□□ -1.15
SCAF4-204ENST00000467731 RABGAP1Q9Y3P9 1069 aa7.87□□□□□ -1.15
SCAF4-204ENST00000467731 ABCB11O95342 1321 aa7.86□□□□□ -1.15
SCAF4-204ENST00000467731 NFIBO00712 420 aa7.86□□□□□ -1.15
SCAF4-204ENST00000467731 TPM2P07951 284 aa7.86□□□□□ -1.15
SCAF4-204ENST00000467731 CALML3P27482 149 aa7.86□□□□□ -1.15
SCAF4-204ENST00000467731 KRT2P35908 639 aa7.86□□□□□ -1.15
SCAF4-204ENST00000467731 ERVK-9P63128 1117 aa7.86□□□□□ -1.15
SCAF4-204ENST00000467731 ERVK-24P63145 666 aa7.86□□□□□ -1.15
SCAF4-204ENST00000467731 TRAF1Q13077 416 aa7.86□□□□□ -1.15
SCAF4-204ENST00000467731 GNL2Q13823 731 aaKnown RBP7.86□□□□□ -1.15
SCAF4-204ENST00000467731 SAFBQ15424 915 aaKnown RBP eCLIP7.86□□□□□ -1.15
SCAF4-204ENST00000467731 Q3C1V9 767 aa7.86□□□□□ -1.15
SCAF4-204ENST00000467731 MUM1L1Q5H9M0 696 aa7.86□□□□□ -1.15
SCAF4-204ENST00000467731 USP17L6PQ6QN14 398 aa7.86□□□□□ -1.15
SCAF4-204ENST00000467731 BLIDQ8IZY5 108 aa7.86□□□□□ -1.15
SCAF4-204ENST00000467731 FAM177A1Q8N128 213 aaPredicted RBP7.86□□□□□ -1.15
SCAF4-204ENST00000467731 RASGRP4Q8TDF6 673 aa7.86□□□□□ -1.15
SCAF4-204ENST00000467731 CUL5Q93034 780 aa7.86□□□□□ -1.15
SCAF4-204ENST00000467731 TRERF1Q96PN7 1200 aa7.86□□□□□ -1.15
SCAF4-204ENST00000467731 PSTPIP2Q9H939 334 aa7.86□□□□□ -1.15
SCAF4-204ENST00000467731 BRMS1Q9HCU9 246 aa7.86□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms