RNA–Protein interactions for RNA: ENST00000467171.2

APOBEC1-202, Transcript of apolipoprotein B mRNA editing enzyme catalytic subunit 1, humanhuman

TSL 1 (best)

Gene APOBEC1, Length 861 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC1-202ENST00000467171 GLT8D2Q9H1C3 349 aa10.88□□□□□ -0.67
APOBEC1-202ENST00000467171 VEZTQ9HBM0 779 aa10.88□□□□□ -0.67
APOBEC1-202ENST00000467171 SPON1Q9HCB6 807 aa10.88□□□□□ -0.67
APOBEC1-202ENST00000467171 ANO10Q9NW15 660 aa10.88□□□□□ -0.67
APOBEC1-202ENST00000467171 KCNH3Q9ULD8 1083 aa10.88□□□□□ -0.67
APOBEC1-202ENST00000467171 GREB1LQ9C091 1923 aaPredicted RBP10.88□□□□□ -0.67
APOBEC1-202ENST00000467171 ADAMTSL1Q8N6G6 1762 aa10.88□□□□□ -0.67
APOBEC1-202ENST00000467171 BHMG1C9JSJ3 638 aaPredicted RBP10.87□□□□□ -0.67
APOBEC1-202ENST00000467171 LAD1O00515 517 aa10.87□□□□□ -0.67
APOBEC1-202ENST00000467171 GDF11O95390 407 aa10.87□□□□□ -0.67
APOBEC1-202ENST00000467171 NDUFB10O96000 172 aa10.87□□□□□ -0.67
APOBEC1-202ENST00000467171 GMPSP49915 693 aaPredicted RBP10.87□□□□□ -0.67
APOBEC1-202ENST00000467171 PRELPP51888 382 aa10.87□□□□□ -0.67
APOBEC1-202ENST00000467171 ATP2B2Q01814 1243 aa10.87□□□□□ -0.67
APOBEC1-202ENST00000467171 ZNF174Q15697 407 aa10.87□□□□□ -0.67
APOBEC1-202ENST00000467171 STX1AQ16623 288 aa10.87□□□□□ -0.67
APOBEC1-202ENST00000467171 NBPF9Q3BBW0 867 aa10.87□□□□□ -0.67
APOBEC1-202ENST00000467171 NOM1Q5C9Z4 860 aaKnown RBP10.87□□□□□ -0.67
APOBEC1-202ENST00000467171 HOMER1Q86YM7 354 aa10.87□□□□□ -0.67
APOBEC1-202ENST00000467171 C4orf32Q8N8J7 132 aa10.87□□□□□ -0.67
APOBEC1-202ENST00000467171 RNF214Q8ND24 703 aa10.87□□□□□ -0.67
APOBEC1-202ENST00000467171 NLGN2Q8NFZ4 835 aa10.87□□□□□ -0.67
APOBEC1-202ENST00000467171 BBXQ8WY36 941 aaPredicted RBP10.87□□□□□ -0.67
APOBEC1-202ENST00000467171 PYM1Q9BRP8 204 aaKnown RBP10.87□□□□□ -0.67
APOBEC1-202ENST00000467171 CPVLQ9H3G5 476 aa10.87□□□□□ -0.67
APOBEC1-202ENST00000467171 VAT1LQ9HCJ6 419 aa10.87□□□□□ -0.67
APOBEC1-202ENST00000467171 GPCPD1Q9NPB8 672 aa10.87□□□□□ -0.67
APOBEC1-202ENST00000467171 KIAA1468Q9P260 1216 aa10.87□□□□□ -0.67
APOBEC1-202ENST00000467171 USP25Q9UHP3 1055 aa10.87□□□□□ -0.67
APOBEC1-202ENST00000467171 TUBE1Q9UJT0 475 aa10.87□□□□□ -0.67
APOBEC1-202ENST00000467171 ZBTB21Q9ULJ3 1066 aa10.87□□□□□ -0.67
APOBEC1-202ENST00000467171 TMX2Q9Y320 296 aa10.87□□□□□ -0.67
APOBEC1-202ENST00000467171 WNT7AO00755 349 aa10.86□□□□□ -0.67
APOBEC1-202ENST00000467171 ADAMTS3O15072 1205 aa10.86□□□□□ -0.67
APOBEC1-202ENST00000467171 PLA2G6O60733 806 aa10.86□□□□□ -0.67
APOBEC1-202ENST00000467171 ATP2B1P20020 1258 aa10.86□□□□□ -0.67
APOBEC1-202ENST00000467171 PRPHP41219 470 aa10.86□□□□□ -0.67
APOBEC1-202ENST00000467171 JAG1P78504 1218 aa10.86□□□□□ -0.67
APOBEC1-202ENST00000467171 RASSF7Q02833 373 aa10.86□□□□□ -0.67
APOBEC1-202ENST00000467171 GRIN1Q05586 938 aa10.86□□□□□ -0.67
APOBEC1-202ENST00000467171 PTGDRQ13258 359 aa10.86□□□□□ -0.67
APOBEC1-202ENST00000467171 NONOQ15233 471 aaKnown RBP eCLIP10.86□□□□□ -0.67
APOBEC1-202ENST00000467171 SHROOM1Q2M3G4 852 aaPredicted RBP10.86□□□□□ -0.67
APOBEC1-202ENST00000467171 MCTP2Q6DN12 878 aa10.86□□□□□ -0.67
APOBEC1-202ENST00000467171 TTBK2Q6IQ55 1244 aa10.86□□□□□ -0.67
APOBEC1-202ENST00000467171 KANK3Q6NY19 840 aa10.86□□□□□ -0.67
APOBEC1-202ENST00000467171 KRBA2Q6ZNG9 492 aa10.86□□□□□ -0.67
APOBEC1-202ENST00000467171 TMEM39BQ9GZU3 492 aa10.86□□□□□ -0.67
APOBEC1-202ENST00000467171 CSRNP2Q9H175 543 aa10.86□□□□□ -0.67
APOBEC1-202ENST00000467171 SH2D4AQ9H788 454 aa10.86□□□□□ -0.67
APOBEC1-202ENST00000467171 ARHGEF10LQ9HCE6 1279 aa10.86□□□□□ -0.67
APOBEC1-202ENST00000467171 RIC8AQ9NPQ8 531 aa10.86□□□□□ -0.67
APOBEC1-202ENST00000467171 CNOT7Q9UIV1 285 aaKnown RBP10.86□□□□□ -0.67
APOBEC1-202ENST00000467171 HOOK1Q9UJC3 728 aaKnown RBP10.86□□□□□ -0.67
APOBEC1-202ENST00000467171 FER1L6Q2WGJ9 1857 aa10.85□□□□□ -0.67
APOBEC1-202ENST00000467171 USP17L10C9JJH3 530 aa10.85□□□□□ -0.67
APOBEC1-202ENST00000467171 ASNSP08243 561 aa10.85□□□□□ -0.67
APOBEC1-202ENST00000467171 BMP3P12645 472 aa10.85□□□□□ -0.67
APOBEC1-202ENST00000467171 LONP1P36776 959 aaKnown RBP10.85□□□□□ -0.67
APOBEC1-202ENST00000467171 CAP2P40123 477 aa10.85□□□□□ -0.67
APOBEC1-202ENST00000467171 ADCY7P51828 1080 aa10.85□□□□□ -0.67
APOBEC1-202ENST00000467171 MRPL12P52815 198 aaKnown RBP10.85□□□□□ -0.67
APOBEC1-202ENST00000467171 TRAF1Q13077 416 aa10.85□□□□□ -0.67
APOBEC1-202ENST00000467171 CAMK2BQ13554 666 aa10.85□□□□□ -0.67
APOBEC1-202ENST00000467171 RASA3Q14644 834 aa10.85□□□□□ -0.67
APOBEC1-202ENST00000467171 ANO6Q4KMQ2 910 aa10.85□□□□□ -0.67
APOBEC1-202ENST00000467171 HS1BP3Q53T59 392 aa10.85□□□□□ -0.67
APOBEC1-202ENST00000467171 KCTD1Q719H9 257 aa10.85□□□□□ -0.67
APOBEC1-202ENST00000467171 REXO1Q8N1G1 1221 aaKnown RBP10.85□□□□□ -0.67
APOBEC1-202ENST00000467171 CNNM3Q8NE01 707 aa10.85□□□□□ -0.67
APOBEC1-202ENST00000467171 CCDC34Q96HJ3 373 aa10.85□□□□□ -0.67
APOBEC1-202ENST00000467171 TEPSINQ96N21 525 aa10.85□□□□□ -0.67
APOBEC1-202ENST00000467171 PCDHGA10Q9Y5H3 936 aa10.85□□□□□ -0.67
APOBEC1-202ENST00000467171 SIPA1L1O43166 1804 aa10.85□□□□□ -0.67
APOBEC1-202ENST00000467171 ECM29Q5VYK3 1845 aa10.85□□□□□ -0.67
APOBEC1-202ENST00000467171 MYH15Q9Y2K3 1946 aa10.85□□□□□ -0.67
APOBEC1-202ENST00000467171 BRCA1P38398 1863 aaKnown RBP10.85□□□□□ -0.67
APOBEC1-202ENST00000467171 A0A1W2PRG0 241 aa10.84□□□□□ -0.67
APOBEC1-202ENST00000467171 PHF20L1A8MW92 1017 aa10.84□□□□□ -0.67
APOBEC1-202ENST00000467171 PPP1R3GB7ZBB8 358 aa10.84□□□□□ -0.67
APOBEC1-202ENST00000467171 PPP1R11O60927 126 aaPredicted RBP10.84□□□□□ -0.67
APOBEC1-202ENST00000467171 LMNB1P20700 586 aa10.84□□□□□ -0.67
APOBEC1-202ENST00000467171 MCM7P33993 719 aa10.84□□□□□ -0.67
APOBEC1-202ENST00000467171 CLK2P49760 499 aaKnown RBP10.84□□□□□ -0.67
APOBEC1-202ENST00000467171 ZNF165P49910 485 aa10.84□□□□□ -0.67
APOBEC1-202ENST00000467171 NLRP12P59046 1061 aa10.84□□□□□ -0.67
APOBEC1-202ENST00000467171 MDM2Q00987 491 aaPredicted RBP10.84□□□□□ -0.67
APOBEC1-202ENST00000467171 INF2Q27J81 1249 aa10.84□□□□□ -0.67
APOBEC1-202ENST00000467171 QRICH1Q2TAL8 776 aa10.84□□□□□ -0.67
APOBEC1-202ENST00000467171 LONRF3Q496Y0 759 aa10.84□□□□□ -0.67
APOBEC1-202ENST00000467171 SYDE2Q5VT97 1194 aa10.84□□□□□ -0.67
APOBEC1-202ENST00000467171 NEK8Q86SG6 692 aa10.84□□□□□ -0.67
APOBEC1-202ENST00000467171 RASGRP4Q8TDF6 673 aa10.84□□□□□ -0.67
APOBEC1-202ENST00000467171 CUL5Q93034 780 aa10.84□□□□□ -0.67
APOBEC1-202ENST00000467171 BPIFA3Q9BQP9 254 aa10.84□□□□□ -0.67
APOBEC1-202ENST00000467171 NAT10Q9H0A0 1025 aaKnown RBP10.84□□□□□ -0.67
APOBEC1-202ENST00000467171 CBX8Q9HC52 389 aa10.84□□□□□ -0.67
APOBEC1-202ENST00000467171 GOPCQ9HD26 462 aa10.84□□□□□ -0.67
APOBEC1-202ENST00000467171 SHTN1A0MZ66 631 aa10.83□□□□□ -0.68
APOBEC1-202ENST00000467171 GOLGA8CPA6NN73 597 aa10.83□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms