RNA–Protein interactions for RNA: ENST00000467114.2

PRPF40A-205, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

TSL 4

Gene PRPF40A, Length 546 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-205ENST00000467114 ZNF214Q9UL59 606 aaPredicted RBP7.49□□□□□ -1.21
PRPF40A-205ENST00000467114 PPT2Q9UMR5 302 aa7.49□□□□□ -1.21
PRPF40A-205ENST00000467114 A0A087WZG4 1122 aa7.48□□□□□ -1.21
PRPF40A-205ENST00000467114 SRGAP3O43295 1099 aa7.48□□□□□ -1.21
PRPF40A-205ENST00000467114 BUB1BO60566 1050 aaPredicted RBP7.48□□□□□ -1.21
PRPF40A-205ENST00000467114 IGFBP6P24592 240 aaPredicted RBP7.48□□□□□ -1.21
PRPF40A-205ENST00000467114 CAP1Q01518 475 aa7.48□□□□□ -1.21
PRPF40A-205ENST00000467114 NFIXQ14938 502 aa7.48□□□□□ -1.21
PRPF40A-205ENST00000467114 ZC3H14Q6PJT7 736 aaKnown RBP7.48□□□□□ -1.21
PRPF40A-205ENST00000467114 RUFY4Q6ZNE9 571 aa7.48□□□□□ -1.21
PRPF40A-205ENST00000467114 LSRQ86X29 649 aaPredicted RBP7.48□□□□□ -1.21
PRPF40A-205ENST00000467114 JAMLQ86YT9 394 aa7.48□□□□□ -1.21
PRPF40A-205ENST00000467114 FIBCD1Q8N539 461 aa7.48□□□□□ -1.21
PRPF40A-205ENST00000467114 FCRL3Q96P31 734 aaPredicted RBP7.48□□□□□ -1.21
PRPF40A-205ENST00000467114 DDX41Q9UJV9 622 aaKnown RBP7.48□□□□□ -1.21
PRPF40A-205ENST00000467114 SF3B6Q9Y3B4 125 aaKnown RBP7.48□□□□□ -1.21
PRPF40A-205ENST00000467114 ZNF451Q9Y4E5 1061 aa7.48□□□□□ -1.21
PRPF40A-205ENST00000467114 A0A1W2PQ27 194 aa7.47□□□□□ -1.21
PRPF40A-205ENST00000467114 A0A1W2PQ64 194 aa7.47□□□□□ -1.21
PRPF40A-205ENST00000467114 A0A1W2PQC6 194 aa7.47□□□□□ -1.21
PRPF40A-205ENST00000467114 A0A1W2PQD8 194 aa7.47□□□□□ -1.21
PRPF40A-205ENST00000467114 OTOL1A6NHN0 477 aaPredicted RBP7.47□□□□□ -1.21
PRPF40A-205ENST00000467114 TP53P04637 393 aaPredicted RBP7.47□□□□□ -1.21
PRPF40A-205ENST00000467114 DBHP09172 617 aa7.47□□□□□ -1.21
PRPF40A-205ENST00000467114 ITGA4P13612 1032 aa7.47□□□□□ -1.21
PRPF40A-205ENST00000467114 NCKAP1LP55160 1127 aa7.47□□□□□ -1.21
PRPF40A-205ENST00000467114 CORO7P57737 925 aa7.47□□□□□ -1.21
PRPF40A-205ENST00000467114 VMACQ2NL98 169 aa7.47□□□□□ -1.21
PRPF40A-205ENST00000467114 FBXW10Q5XX13 1052 aa7.47□□□□□ -1.21
PRPF40A-205ENST00000467114 PAQR3Q6TCH7 311 aa7.47□□□□□ -1.21
PRPF40A-205ENST00000467114 SP8Q8IXZ3 490 aa7.47□□□□□ -1.21
PRPF40A-205ENST00000467114 LINC01356Q8N9X3 169 aa7.47□□□□□ -1.21
PRPF40A-205ENST00000467114 NLGN2Q8NFZ4 835 aa7.47□□□□□ -1.21
PRPF40A-205ENST00000467114 RNF34Q969K3 372 aa7.47□□□□□ -1.21
PRPF40A-205ENST00000467114 PWWP2AQ96N64 755 aa7.47□□□□□ -1.21
PRPF40A-205ENST00000467114 PDLIM7Q9NR12 457 aa7.47□□□□□ -1.21
PRPF40A-205ENST00000467114 CYBBP04839 570 aa7.46□□□□□ -1.22
PRPF40A-205ENST00000467114 POU4F1Q01851 419 aa7.46□□□□□ -1.22
PRPF40A-205ENST00000467114 COL9A2Q14055 689 aaPredicted RBP7.46□□□□□ -1.22
PRPF40A-205ENST00000467114 CXorf38Q8TB03 319 aa7.46□□□□□ -1.22
PRPF40A-205ENST00000467114 PTCHD1Q96NR3 888 aa7.46□□□□□ -1.22
PRPF40A-205ENST00000467114 LUC7LQ9NQ29 371 aaKnown RBP7.46□□□□□ -1.22
PRPF40A-205ENST00000467114 CBFA2T2O43439 604 aa7.45□□□□□ -1.22
PRPF40A-205ENST00000467114 SYN1P17600 705 aa7.45□□□□□ -1.22
PRPF40A-205ENST00000467114 FBLN1P23142 703 aa7.45□□□□□ -1.22
PRPF40A-205ENST00000467114 ZNF200P98182 395 aaPredicted RBP7.45□□□□□ -1.22
PRPF40A-205ENST00000467114 TP53I13Q8NBR0 393 aaPredicted RBP7.45□□□□□ -1.22
PRPF40A-205ENST00000467114 NOL6Q9H6R4 1146 aaKnown RBP7.45□□□□□ -1.22
PRPF40A-205ENST00000467114 FAM86C1Q9NVL1 165 aa7.45□□□□□ -1.22
PRPF40A-205ENST00000467114 DIS3Q9Y2L1 958 aaKnown RBP7.45□□□□□ -1.22
PRPF40A-205ENST00000467114 LTBP3Q9NS15 1303 aa7.45□□□□□ -1.22
PRPF40A-205ENST00000467114 TBC1D8O95759 1140 aa7.44□□□□□ -1.22
PRPF40A-205ENST00000467114 IFNGR1P15260 489 aa7.44□□□□□ -1.22
PRPF40A-205ENST00000467114 PFKLP17858 780 aa7.44□□□□□ -1.22
PRPF40A-205ENST00000467114 TCEAL1Q15170 157 aa7.44□□□□□ -1.22
PRPF40A-205ENST00000467114 TARBP2Q15633 366 aaKnown RBP7.44□□□□□ -1.22
PRPF40A-205ENST00000467114 FEZF2Q8TBJ5 459 aa7.44□□□□□ -1.22
PRPF40A-205ENST00000467114 E9PSI1 815 aa7.43□□□□□ -1.22
PRPF40A-205ENST00000467114 CD3EP07766 207 aa7.43□□□□□ -1.22
PRPF40A-205ENST00000467114 L1CAMP32004 1257 aa7.43□□□□□ -1.22
PRPF40A-205ENST00000467114 SOX9P48436 509 aa7.43□□□□□ -1.22
PRPF40A-205ENST00000467114 BICRALQ6AI39 1079 aa7.43□□□□□ -1.22
PRPF40A-205ENST00000467114 RCSD1Q6JBY9 416 aa7.43□□□□□ -1.22
PRPF40A-205ENST00000467114 SPATA32Q96LK8 384 aa7.43□□□□□ -1.22
PRPF40A-205ENST00000467114 ZDHHC15Q96MV8 337 aa7.43□□□□□ -1.22
PRPF40A-205ENST00000467114 HAUS7Q99871 368 aa7.43□□□□□ -1.22
PRPF40A-205ENST00000467114 WHRNQ9P202 907 aa7.43□□□□□ -1.22
PRPF40A-205ENST00000467114 HCFC2Q9Y5Z7 792 aa7.43□□□□□ -1.22
PRPF40A-205ENST00000467114 SLC12A7Q9Y666 1083 aa7.43□□□□□ -1.22
PRPF40A-205ENST00000467114 A0A1W2PQJ5 194 aa7.42□□□□□ -1.22
PRPF40A-205ENST00000467114 FFAR3O14843 346 aa7.42□□□□□ -1.22
PRPF40A-205ENST00000467114 TCF3P15923 654 aa7.42□□□□□ -1.22
PRPF40A-205ENST00000467114 CCDC81Q6ZN84 652 aa7.42□□□□□ -1.22
PRPF40A-205ENST00000467114 ZNF654Q8IZM8 581 aa7.42□□□□□ -1.22
PRPF40A-205ENST00000467114 NLGN1Q8N2Q7 840 aa7.42□□□□□ -1.22
PRPF40A-205ENST00000467114 SYT8Q8NBV8 401 aa7.42□□□□□ -1.22
PRPF40A-205ENST00000467114 KRTAP4-5Q9BYR2 181 aa7.42□□□□□ -1.22
PRPF40A-205ENST00000467114 KLHL25Q9H0H3 589 aa7.42□□□□□ -1.22
PRPF40A-205ENST00000467114 GINM1Q9NU53 330 aa7.42□□□□□ -1.22
PRPF40A-205ENST00000467114 LIMS1P48059 325 aa7.41□□□□□ -1.22
PRPF40A-205ENST00000467114 PAK2Q13177 524 aa7.41□□□□□ -1.22
PRPF40A-205ENST00000467114 EEF1DP3Q658K8 133 aa7.41□□□□□ -1.22
PRPF40A-205ENST00000467114 C19orf47Q8N9M1 422 aaKnown RBP7.41□□□□□ -1.22
PRPF40A-205ENST00000467114 CRBNQ96SW2 442 aa7.41□□□□□ -1.22
PRPF40A-205ENST00000467114 MCMBPQ9BTE3 642 aa7.41□□□□□ -1.22
PRPF40A-205ENST00000467114 RNF38Q9H0F5 515 aa7.41□□□□□ -1.22
PRPF40A-205ENST00000467114 PHAXQ9H814 394 aaKnown RBP7.41□□□□□ -1.22
PRPF40A-205ENST00000467114 AURKAO14965 403 aa7.4□□□□□ -1.22
PRPF40A-205ENST00000467114 GLI4P10075 376 aa7.4□□□□□ -1.22
PRPF40A-205ENST00000467114 GIPRP48546 466 aa7.4□□□□□ -1.22
PRPF40A-205ENST00000467114 PRR5P85299 388 aa7.4□□□□□ -1.22
PRPF40A-205ENST00000467114 C9orf131Q5VYM1 1079 aa7.4□□□□□ -1.22
PRPF40A-205ENST00000467114 NT5DC4Q86YG4 428 aa7.4□□□□□ -1.22
PRPF40A-205ENST00000467114 ZDHHC14Q8IZN3 488 aa7.4□□□□□ -1.22
PRPF40A-205ENST00000467114 RASGRP4Q8TDF6 673 aa7.4□□□□□ -1.22
PRPF40A-205ENST00000467114 TEPSINQ96N21 525 aa7.4□□□□□ -1.22
PRPF40A-205ENST00000467114 PLA2G2DQ9UNK4 145 aa7.4□□□□□ -1.22
PRPF40A-205ENST00000467114 ZC3H12DA2A288 527 aaKnown RBP7.39□□□□□ -1.23
PRPF40A-205ENST00000467114 F8W031 263 aaPredicted RBP7.39□□□□□ -1.23
PRPF40A-205ENST00000467114 ATF2P15336 505 aa7.39□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms