RNA–Protein interactions for RNA: ENST00000467065.1

UBXN4-205, Transcript of UBX domain protein 4, humanhuman

TSL 5

Gene UBXN4, Length 334 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN4-205ENST00000467065 ZFP91Q96JP5 570 aaPredicted RBP7.72□□□□□ -1.17
UBXN4-205ENST00000467065 USP26Q9BXU7 913 aa7.72□□□□□ -1.17
UBXN4-205ENST00000467065 BACH2Q9BYV9 841 aa7.72□□□□□ -1.17
UBXN4-205ENST00000467065 NBPF3Q9H094 633 aa7.72□□□□□ -1.17
UBXN4-205ENST00000467065 C11orf49Q9H6J7 331 aa7.72□□□□□ -1.17
UBXN4-205ENST00000467065 DDX20Q9UHI6 824 aaKnown RBP7.72□□□□□ -1.17
UBXN4-205ENST00000467065 ZMYND8Q9ULU4 1186 aaPredicted RBP7.72□□□□□ -1.17
UBXN4-205ENST00000467065 STX8Q9UNK0 236 aa7.72□□□□□ -1.17
UBXN4-205ENST00000467065 MTMR7Q9Y216 660 aa7.72□□□□□ -1.17
UBXN4-205ENST00000467065 NR2E3Q9Y5X4 410 aa7.72□□□□□ -1.17
UBXN4-205ENST00000467065 IFIT3O14879 490 aaKnown RBP7.71□□□□□ -1.18
UBXN4-205ENST00000467065 SLC27A2O14975 620 aa7.71□□□□□ -1.18
UBXN4-205ENST00000467065 DHX16O60231 1041 aaKnown RBP7.71□□□□□ -1.18
UBXN4-205ENST00000467065 COL6A1P12109 1028 aa7.71□□□□□ -1.18
UBXN4-205ENST00000467065 SYN1P17600 705 aa7.71□□□□□ -1.18
UBXN4-205ENST00000467065 ANP32AP39687 249 aaKnown RBP7.71□□□□□ -1.18
UBXN4-205ENST00000467065 MCM2P49736 904 aa7.71□□□□□ -1.18
UBXN4-205ENST00000467065 FXR1P51114 621 aaKnown RBP eCLIP7.71□□□□□ -1.18
UBXN4-205ENST00000467065 PTH1RQ03431 593 aa7.71□□□□□ -1.18
UBXN4-205ENST00000467065 BECN1Q14457 450 aa7.71□□□□□ -1.18
UBXN4-205ENST00000467065 KCTD2Q14681 263 aa7.71□□□□□ -1.18
UBXN4-205ENST00000467065 CATIPQ7Z7H3 387 aa7.71□□□□□ -1.18
UBXN4-205ENST00000467065 TBC1D10CQ8IV04 446 aa7.71□□□□□ -1.18
UBXN4-205ENST00000467065 ABRAQ8N0Z2 381 aa7.71□□□□□ -1.18
UBXN4-205ENST00000467065 PRPF38AQ8NAV1 312 aaKnown RBP7.71□□□□□ -1.18
UBXN4-205ENST00000467065 GMCL1P1Q8NEA9 526 aa7.71□□□□□ -1.18
UBXN4-205ENST00000467065 MKL1Q969V6 931 aa7.71□□□□□ -1.18
UBXN4-205ENST00000467065 MAML3Q96JK9 1138 aa7.71□□□□□ -1.18
UBXN4-205ENST00000467065 JAKMIP1Q96N16 626 aaKnown RBP7.71□□□□□ -1.18
UBXN4-205ENST00000467065 TEX13BQ9BXU2 312 aa7.71□□□□□ -1.18
UBXN4-205ENST00000467065 LSG1Q9H089 658 aaKnown RBP7.71□□□□□ -1.18
UBXN4-205ENST00000467065 KAT14Q9H8E8 782 aa7.71□□□□□ -1.18
UBXN4-205ENST00000467065 RAVER2Q9HCJ3 691 aaKnown RBP7.71□□□□□ -1.18
UBXN4-205ENST00000467065 IL17RBQ9NRM6 502 aa7.71□□□□□ -1.18
UBXN4-205ENST00000467065 RBM27Q9P2N5 1060 aaKnown RBP7.71□□□□□ -1.18
UBXN4-205ENST00000467065 ANAPC4Q9UJX5 808 aa7.71□□□□□ -1.18
UBXN4-205ENST00000467065 RIPK3Q9Y572 518 aa7.71□□□□□ -1.18
UBXN4-205ENST00000467065 ZMYM6O95789 1325 aa7.71□□□□□ -1.18
UBXN4-205ENST00000467065 LAMA2P24043 3122 aaKnown RBP7.71□□□□□ -1.18
UBXN4-205ENST00000467065 KIAA1217Q5T5P2 1943 aa7.7□□□□□ -1.18
UBXN4-205ENST00000467065 CCDC196A0A1B0GTZ2 297 aa7.7□□□□□ -1.18
UBXN4-205ENST00000467065 TMEM232C9JQI7 657 aa7.7□□□□□ -1.18
UBXN4-205ENST00000467065 E7EWF7 191 aa7.7□□□□□ -1.18
UBXN4-205ENST00000467065 ORC4O43929 436 aa7.7□□□□□ -1.18
UBXN4-205ENST00000467065 MSCO60682 206 aa7.7□□□□□ -1.18
UBXN4-205ENST00000467065 CALM1P0DP23 149 aa7.7□□□□□ -1.18
UBXN4-205ENST00000467065 CALM2P0DP24 149 aa7.7□□□□□ -1.18
UBXN4-205ENST00000467065 CALM3P0DP25 149 aa7.7□□□□□ -1.18
UBXN4-205ENST00000467065 BMP3P12645 472 aa7.7□□□□□ -1.18
UBXN4-205ENST00000467065 CASTP20810 708 aaKnown RBP7.7□□□□□ -1.18
UBXN4-205ENST00000467065 KIF5BP33176 963 aa7.7□□□□□ -1.18
UBXN4-205ENST00000467065 HSPA4P34932 840 aa7.7□□□□□ -1.18
UBXN4-205ENST00000467065 COPB2P35606 906 aa7.7□□□□□ -1.18
UBXN4-205ENST00000467065 PBX2P40425 430 aa7.7□□□□□ -1.18
UBXN4-205ENST00000467065 STAT2P52630 851 aa7.7□□□□□ -1.18
UBXN4-205ENST00000467065 AKAP17AQ02040 695 aaKnown RBP7.7□□□□□ -1.18
UBXN4-205ENST00000467065 IKQ13123 557 aaPredicted RBP7.7□□□□□ -1.18
UBXN4-205ENST00000467065 RABEP1Q15276 862 aa7.7□□□□□ -1.18
UBXN4-205ENST00000467065 LRRC26Q2I0M4 334 aa7.7□□□□□ -1.18
UBXN4-205ENST00000467065 ZNF792Q3KQV3 632 aa7.7□□□□□ -1.18
UBXN4-205ENST00000467065 TMEM67Q5HYA8 995 aa7.7□□□□□ -1.18
UBXN4-205ENST00000467065 GJC2Q5T442 439 aaPredicted RBP7.7□□□□□ -1.18
UBXN4-205ENST00000467065 IFIT1BQ5T764 474 aaKnown RBP7.7□□□□□ -1.18
UBXN4-205ENST00000467065 KCTD1Q719H9 257 aa7.7□□□□□ -1.18
UBXN4-205ENST00000467065 DHX32Q7L7V1 743 aaKnown RBP7.7□□□□□ -1.18
UBXN4-205ENST00000467065 STAG1Q8WVM7 1258 aa7.7□□□□□ -1.18
UBXN4-205ENST00000467065 TMEM87BQ96K49 555 aa7.7□□□□□ -1.18
UBXN4-205ENST00000467065 TTC14Q96N46 770 aa7.7□□□□□ -1.18
UBXN4-205ENST00000467065 SENP6Q9GZR1 1112 aaPredicted RBP7.7□□□□□ -1.18
UBXN4-205ENST00000467065 SLC38A10Q9HBR0 1119 aa7.7□□□□□ -1.18
UBXN4-205ENST00000467065 HOMER2Q9NSB8 354 aa7.7□□□□□ -1.18
UBXN4-205ENST00000467065 PDRG1Q9NUG6 133 aa7.7□□□□□ -1.18
UBXN4-205ENST00000467065 SLC5A4Q9NY91 659 aa7.7□□□□□ -1.18
UBXN4-205ENST00000467065 FEM1BQ9UK73 627 aa7.7□□□□□ -1.18
UBXN4-205ENST00000467065 SYNPO2Q9UMS6 1093 aa7.7□□□□□ -1.18
UBXN4-205ENST00000467065 BAZ2BQ9UIF8 2168 aaKnown RBP7.69□□□□□ -1.18
UBXN4-205ENST00000467065 CPLX1O14810 134 aa7.69□□□□□ -1.18
UBXN4-205ENST00000467065 SEPT4O43236 478 aa7.69□□□□□ -1.18
UBXN4-205ENST00000467065 ZBED4O75132 1171 aa7.69□□□□□ -1.18
UBXN4-205ENST00000467065 KDM4AO75164 1064 aa7.69□□□□□ -1.18
UBXN4-205ENST00000467065 TAL1P17542 331 aaPredicted RBP7.69□□□□□ -1.18
UBXN4-205ENST00000467065 SLC1A4P43007 532 aa7.69□□□□□ -1.18
UBXN4-205ENST00000467065 NEK4P51957 841 aa7.69□□□□□ -1.18
UBXN4-205ENST00000467065 SNAP25P60880 206 aa7.69□□□□□ -1.18
UBXN4-205ENST00000467065 TRAF1Q13077 416 aa7.69□□□□□ -1.18
UBXN4-205ENST00000467065 WTAPQ15007 396 aa7.69□□□□□ -1.18
UBXN4-205ENST00000467065 NECTIN1Q15223 517 aa7.69□□□□□ -1.18
UBXN4-205ENST00000467065 CCDC96Q2M329 555 aa7.69□□□□□ -1.18
UBXN4-205ENST00000467065 C8orf34Q49A92 452 aa7.69□□□□□ -1.18
UBXN4-205ENST00000467065 CCDC174Q6PII3 467 aa7.69□□□□□ -1.18
UBXN4-205ENST00000467065 FBXO22Q8NEZ5 403 aa7.69□□□□□ -1.18
UBXN4-205ENST00000467065 LENG1Q96BZ8 264 aaPredicted RBP7.69□□□□□ -1.18
UBXN4-205ENST00000467065 DDX11Q96FC9 970 aa7.69□□□□□ -1.18
UBXN4-205ENST00000467065 GMCL1Q96IK5 515 aa7.69□□□□□ -1.18
UBXN4-205ENST00000467065 ZSCAN10Q96SZ4 725 aaPredicted RBP7.69□□□□□ -1.18
UBXN4-205ENST00000467065 TINF2Q9BSI4 451 aa7.69□□□□□ -1.18
UBXN4-205ENST00000467065 MTA3Q9BTC8 594 aa7.69□□□□□ -1.18
UBXN4-205ENST00000467065 PRO3102Q9H379 93 aa7.69□□□□□ -1.18
UBXN4-205ENST00000467065 SLC12A7Q9Y666 1083 aa7.69□□□□□ -1.18
UBXN4-205ENST00000467065 NEDD4P46934 1319 aa7.69□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 66.3 ms