RNA–Protein interactions for RNA: ENST00000466897.1

NPHP4-205, Transcript of nephrocystin 4, humanhuman

TSL 1 (best)

Gene NPHP4, Length 1,192 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-205ENST00000466897 BARHL2Q9NY43 387 aa17.54■□□□□ 0.4
NPHP4-205ENST00000466897 ORC3Q9UBD5 711 aaPredicted RBP17.54■□□□□ 0.4
NPHP4-205ENST00000466897 PCDHA1Q9Y5I3 950 aa17.54■□□□□ 0.4
NPHP4-205ENST00000466897 GPR25O00155 361 aa17.53■□□□□ 0.4
NPHP4-205ENST00000466897 FDPSP14324 419 aaKnown RBP17.53■□□□□ 0.4
NPHP4-205ENST00000466897 GHRHRQ02643 423 aa17.53■□□□□ 0.4
NPHP4-205ENST00000466897 PLS1Q14651 629 aa17.53■□□□□ 0.4
NPHP4-205ENST00000466897 RGS22Q8NE09 1264 aa17.53■□□□□ 0.4
NPHP4-205ENST00000466897 TSHZ2Q9NRE2 1034 aa17.53■□□□□ 0.4
NPHP4-205ENST00000466897 MRPL11Q9Y3B7 192 aaKnown RBP17.53■□□□□ 0.4
NPHP4-205ENST00000466897 RIPK3Q9Y572 518 aa17.53■□□□□ 0.4
NPHP4-205ENST00000466897 ESYT2A0FGR8 921 aa17.52■□□□□ 0.4
NPHP4-205ENST00000466897 STXBP3O00186 592 aa17.52■□□□□ 0.4
NPHP4-205ENST00000466897 JAK2O60674 1132 aa17.52■□□□□ 0.4
NPHP4-205ENST00000466897 ERCC3P19447 782 aa17.52■□□□□ 0.4
NPHP4-205ENST00000466897 LACTBP83111 547 aaPredicted RBP17.52■□□□□ 0.4
NPHP4-205ENST00000466897 SP3Q02447 781 aa17.52■□□□□ 0.4
NPHP4-205ENST00000466897 WWC2Q6AWC2 1192 aa17.52■□□□□ 0.4
NPHP4-205ENST00000466897 ABRAQ8N0Z2 381 aa17.52■□□□□ 0.4
NPHP4-205ENST00000466897 CCDC12Q8WUD4 166 aaPredicted RBP17.52■□□□□ 0.4
NPHP4-205ENST00000466897 ACAD9Q9H845 621 aa17.52■□□□□ 0.4
NPHP4-205ENST00000466897 RNF146Q9NTX7 359 aa17.52■□□□□ 0.4
NPHP4-205ENST00000466897 MAP3K20Q9NYL2 800 aaKnown RBP17.52■□□□□ 0.4
NPHP4-205ENST00000466897 KIF3AQ9Y496 699 aa17.52■□□□□ 0.4
NPHP4-205ENST00000466897 hCG_1642624A0A1W2PR95 340 aa17.51■□□□□ 0.39
NPHP4-205ENST00000466897 STRNO43815 780 aa17.51■□□□□ 0.39
NPHP4-205ENST00000466897 PEX10O60683 326 aa17.51■□□□□ 0.39
NPHP4-205ENST00000466897 ALAS1P13196 640 aa17.51■□□□□ 0.39
NPHP4-205ENST00000466897 ANP32AP39687 249 aaKnown RBP17.51■□□□□ 0.39
NPHP4-205ENST00000466897 USH1GQ495M9 461 aa17.51■□□□□ 0.39
NPHP4-205ENST00000466897 HEATR3Q7Z4Q2 680 aa17.51■□□□□ 0.39
NPHP4-205ENST00000466897 CCDC148Q8NFR7 591 aa17.51■□□□□ 0.39
NPHP4-205ENST00000466897 CLEC4DQ8WXI8 215 aa17.51■□□□□ 0.39
NPHP4-205ENST00000466897 PIBF1Q8WXW3 757 aa17.51■□□□□ 0.39
NPHP4-205ENST00000466897 TRERF1Q96PN7 1200 aa17.51■□□□□ 0.39
NPHP4-205ENST00000466897 GLT8D2Q9H1C3 349 aa17.51■□□□□ 0.39
NPHP4-205ENST00000466897 PORCNQ9H237 461 aa17.51■□□□□ 0.39
NPHP4-205ENST00000466897 PFASO15067 1338 aa17.5■□□□□ 0.39
NPHP4-205ENST00000466897 FOXN1O15353 648 aa17.5■□□□□ 0.39
NPHP4-205ENST00000466897 FKTNO75072 461 aa17.5■□□□□ 0.39
NPHP4-205ENST00000466897 XBP1P17861 261 aa17.5■□□□□ 0.39
NPHP4-205ENST00000466897 NCAPG2Q86XI2 1143 aa17.5■□□□□ 0.39
NPHP4-205ENST00000466897 MCF2L2Q86YR7 1114 aa17.5■□□□□ 0.39
NPHP4-205ENST00000466897 COA7Q96BR5 231 aa17.5■□□□□ 0.39
NPHP4-205ENST00000466897 ERO1AQ96HE7 468 aa17.5■□□□□ 0.39
NPHP4-205ENST00000466897 EFCC1Q9HA90 598 aa17.5■□□□□ 0.39
NPHP4-205ENST00000466897 SMC3Q9UQE7 1217 aa17.5■□□□□ 0.39
NPHP4-205ENST00000466897 PIK3CDO00329 1044 aa17.49■□□□□ 0.39
NPHP4-205ENST00000466897 OPLAHO14841 1288 aa17.49■□□□□ 0.39
NPHP4-205ENST00000466897 GNRH1P01148 92 aa17.49■□□□□ 0.39
NPHP4-205ENST00000466897 NAPAP54920 295 aa17.49■□□□□ 0.39
NPHP4-205ENST00000466897 FCGRTP55899 365 aa17.49■□□□□ 0.39
NPHP4-205ENST00000466897 KIF22Q14807 665 aa17.49■□□□□ 0.39
NPHP4-205ENST00000466897 MUM1L1Q5H9M0 696 aa17.49■□□□□ 0.39
NPHP4-205ENST00000466897 GALNT17Q6IS24 598 aa17.49■□□□□ 0.39
NPHP4-205ENST00000466897 TYW1BQ6NUM6 668 aa17.49■□□□□ 0.39
NPHP4-205ENST00000466897 GPR142Q7Z601 462 aa17.49■□□□□ 0.39
NPHP4-205ENST00000466897 CCAR1Q8IX12 1150 aaKnown RBP17.49■□□□□ 0.39
NPHP4-205ENST00000466897 GPKOWQ92917 476 aaPredicted RBP eCLIP17.49■□□□□ 0.39
NPHP4-205ENST00000466897 DDX11Q96FC9 970 aa17.49■□□□□ 0.39
NPHP4-205ENST00000466897 ALG1Q9BT22 464 aa17.49■□□□□ 0.39
NPHP4-205ENST00000466897 ZMYND12Q9H0C1 365 aa17.49■□□□□ 0.39
NPHP4-205ENST00000466897 PPFIA3O75145 1194 aa17.48■□□□□ 0.39
NPHP4-205ENST00000466897 FCER1AP12319 257 aa17.48■□□□□ 0.39
NPHP4-205ENST00000466897 GJB2P29033 226 aa17.48■□□□□ 0.39
NPHP4-205ENST00000466897 HSD17B4P51659 736 aa17.48■□□□□ 0.39
NPHP4-205ENST00000466897 GRB14Q14449 540 aa17.48■□□□□ 0.39
NPHP4-205ENST00000466897 ARHGEF6Q15052 776 aa17.48■□□□□ 0.39
NPHP4-205ENST00000466897 PLEKHH3Q7Z736 793 aa17.48■□□□□ 0.39
NPHP4-205ENST00000466897 FAM184AQ8NB25 1140 aa17.48■□□□□ 0.39
NPHP4-205ENST00000466897 ZNF296Q8WUU4 475 aaPredicted RBP17.48■□□□□ 0.39
NPHP4-205ENST00000466897 SOCS4Q8WXH5 440 aa17.48■□□□□ 0.39
NPHP4-205ENST00000466897 HOMER2Q9NSB8 354 aa17.48■□□□□ 0.39
NPHP4-205ENST00000466897 IVNS1ABPQ9Y6Y0 642 aa17.48■□□□□ 0.39
NPHP4-205ENST00000466897 LRRC37A2A6NM11 1700 aa17.47■□□□□ 0.39
NPHP4-205ENST00000466897 SLC15A5A6NIM6 579 aa17.47■□□□□ 0.39
NPHP4-205ENST00000466897 NFIBO00712 420 aa17.47■□□□□ 0.39
NPHP4-205ENST00000466897 TAL1P17542 331 aaPredicted RBP17.47■□□□□ 0.39
NPHP4-205ENST00000466897 PTPREP23469 700 aa17.47■□□□□ 0.39
NPHP4-205ENST00000466897 CALML3P27482 149 aa17.47■□□□□ 0.39
NPHP4-205ENST00000466897 GNA11P29992 359 aa17.47■□□□□ 0.39
NPHP4-205ENST00000466897 DAGLBQ8NCG7 672 aa17.47■□□□□ 0.39
NPHP4-205ENST00000466897 CUL5Q93034 780 aa17.47■□□□□ 0.39
NPHP4-205ENST00000466897 SHISA4Q96DD7 197 aa17.47■□□□□ 0.39
NPHP4-205ENST00000466897 AIFM3Q96NN9 605 aa17.47■□□□□ 0.39
NPHP4-205ENST00000466897 MMP19Q99542 508 aa17.47■□□□□ 0.39
NPHP4-205ENST00000466897 PHF20Q9BVI0 1012 aa17.47■□□□□ 0.39
NPHP4-205ENST00000466897 RIC8AQ9NPQ8 531 aa17.47■□□□□ 0.39
NPHP4-205ENST00000466897 A1CFQ9NQ94 594 aaKnown RBP17.47■□□□□ 0.39
NPHP4-205ENST00000466897 CYP39A1Q9NYL5 469 aa17.47■□□□□ 0.39
NPHP4-205ENST00000466897 VPS54Q9P1Q0 977 aa17.47■□□□□ 0.39
NPHP4-205ENST00000466897 RBM19Q9Y4C8 960 aaKnown RBP17.47■□□□□ 0.39
NPHP4-205ENST00000466897 DNAJC25-GNG10A0A024R161 153 aa17.46■□□□□ 0.39
NPHP4-205ENST00000466897 TNPO2O14787 897 aaKnown RBP17.46■□□□□ 0.39
NPHP4-205ENST00000466897 CTGFP29279 349 aa17.46■□□□□ 0.39
NPHP4-205ENST00000466897 PSMC4P43686 418 aa17.46■□□□□ 0.39
NPHP4-205ENST00000466897 SLC4A3P48751 1232 aa17.46■□□□□ 0.39
NPHP4-205ENST00000466897 CTCFP49711 727 aaPredicted RBP17.46■□□□□ 0.39
NPHP4-205ENST00000466897 ADCY7P51828 1080 aa17.46■□□□□ 0.39
NPHP4-205ENST00000466897 MRPL12P52815 198 aaKnown RBP17.46■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms