RNA–Protein interactions for RNA: ENST00000466708.5

CCDC78-207, Transcript of coiled-coil domain containing 78, humanhuman

TSL 2

Gene CCDC78, Length 1,847 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC78-207ENST00000466708 SERPINC1P01008 464 aa23.16■■□□□ 1.3
CCDC78-207ENST00000466708 ATP1A3P13637 1013 aa23.16■■□□□ 1.3
CCDC78-207ENST00000466708 UBASH3AP57075 661 aa23.16■■□□□ 1.3
CCDC78-207ENST00000466708 FAM83AQ86UY5 434 aa23.16■■□□□ 1.3
CCDC78-207ENST00000466708 CACTINQ8WUQ7 758 aaKnown RBP23.16■■□□□ 1.3
CCDC78-207ENST00000466708 PSTPIP2Q9H939 334 aa23.16■■□□□ 1.3
CCDC78-207ENST00000466708 ZBTB7AO95365 584 aa23.15■■□□□ 1.3
CCDC78-207ENST00000466708 CDC25AP30304 524 aa23.15■■□□□ 1.3
CCDC78-207ENST00000466708 QRICH1Q2TAL8 776 aa23.15■■□□□ 1.3
CCDC78-207ENST00000466708 PPP4R3AQ6IN85 833 aa23.15■■□□□ 1.3
CCDC78-207ENST00000466708 RASSF8Q8NHQ8 419 aa23.15■■□□□ 1.3
CCDC78-207ENST00000466708 NAP1L4Q99733 375 aaKnown RBP23.15■■□□□ 1.3
CCDC78-207ENST00000466708 NFE2L3Q9Y4A8 694 aa23.15■■□□□ 1.3
CCDC78-207ENST00000466708 CNTNAP1P78357 1384 aa23.15■■□□□ 1.3
CCDC78-207ENST00000466708 TBC1D12O60347 775 aa23.15■■□□□ 1.3
CCDC78-207ENST00000466708 NDUFB10O96000 172 aa23.15■■□□□ 1.3
CCDC78-207ENST00000466708 FMR1Q06787 632 aaKnown RBP eCLIP23.15■■□□□ 1.3
CCDC78-207ENST00000466708 CXCL9Q07325 125 aa23.15■■□□□ 1.3
CCDC78-207ENST00000466708 FILIP1Q7Z7B0 1213 aa23.15■■□□□ 1.3
CCDC78-207ENST00000466708 MTRQ99707 1265 aa23.15■■□□□ 1.3
CCDC78-207ENST00000466708 CASP1P29466 404 aa23.14■■□□□ 1.29
CCDC78-207ENST00000466708 CDC37Q16543 378 aaPredicted RBP23.14■■□□□ 1.29
CCDC78-207ENST00000466708 CALCRLQ16602 461 aa23.14■■□□□ 1.29
CCDC78-207ENST00000466708 MCTP2Q6DN12 878 aa23.14■■□□□ 1.29
CCDC78-207ENST00000466708 CIAPIN1Q6FI81 312 aa23.14■■□□□ 1.29
CCDC78-207ENST00000466708 CABP7Q86V35 215 aa23.14■■□□□ 1.29
CCDC78-207ENST00000466708 IGSF22Q8N9C0 903 aa23.14■■□□□ 1.29
CCDC78-207ENST00000466708 JDP2Q8WYK2 163 aa23.14■■□□□ 1.29
CCDC78-207ENST00000466708 MTMR9Q96QG7 549 aa23.14■■□□□ 1.29
CCDC78-207ENST00000466708 TAOK3Q9H2K8 898 aa23.14■■□□□ 1.29
CCDC78-207ENST00000466708 ARHGEF10LQ9HCE6 1279 aa23.14■■□□□ 1.29
CCDC78-207ENST00000466708 PCDHA1Q9Y5I3 950 aa23.14■■□□□ 1.29
CCDC78-207ENST00000466708 BMP3P12645 472 aa23.13■■□□□ 1.29
CCDC78-207ENST00000466708 ZNF18P17022 549 aa23.13■■□□□ 1.29
CCDC78-207ENST00000466708 JAG1P78504 1218 aa23.13■■□□□ 1.29
CCDC78-207ENST00000466708 LRMPQ12912 555 aa23.13■■□□□ 1.29
CCDC78-207ENST00000466708 CUL4BQ13620 913 aa23.13■■□□□ 1.29
CCDC78-207ENST00000466708 RRP1BQ14684 758 aaKnown RBP23.13■■□□□ 1.29
CCDC78-207ENST00000466708 NAALADL2Q58DX5 795 aa23.13■■□□□ 1.29
CCDC78-207ENST00000466708 BTNL9Q6UXG8 535 aa23.13■■□□□ 1.29
CCDC78-207ENST00000466708 STAMQ92783 540 aa23.13■■□□□ 1.29
CCDC78-207ENST00000466708 ZBED3Q96IU2 234 aaPredicted RBP23.13■■□□□ 1.29
CCDC78-207ENST00000466708 FER1L6Q2WGJ9 1857 aa23.13■■□□□ 1.29
CCDC78-207ENST00000466708 PP2D1A8MPX8 630 aa23.12■■□□□ 1.29
CCDC78-207ENST00000466708 GCFC2P16383 781 aaKnown RBP23.12■■□□□ 1.29
CCDC78-207ENST00000466708 FXR2P51116 673 aaKnown RBP eCLIP23.12■■□□□ 1.29
CCDC78-207ENST00000466708 POTEDQ86YR6 584 aa23.12■■□□□ 1.29
CCDC78-207ENST00000466708 RAB34Q9BZG1 259 aa23.12■■□□□ 1.29
CCDC78-207ENST00000466708 BLZF1Q9H2G9 400 aa23.12■■□□□ 1.29
CCDC78-207ENST00000466708 KBTBD4Q9NVX7 518 aa23.12■■□□□ 1.29
CCDC78-207ENST00000466708 RPN1P04843 607 aaKnown RBP23.12■■□□□ 1.29
CCDC78-207ENST00000466708 TNNI2P48788 182 aa23.12■■□□□ 1.29
CCDC78-207ENST00000466708 TMEM266Q2M3C6 531 aa23.12■■□□□ 1.29
CCDC78-207ENST00000466708 SYDE2Q5VT97 1194 aa23.12■■□□□ 1.29
CCDC78-207ENST00000466708 SPATA1Q5VX52 437 aa23.12■■□□□ 1.29
CCDC78-207ENST00000466708 TMC6Q7Z403 805 aa23.12■■□□□ 1.29
CCDC78-207ENST00000466708 CCDC150Q8NCX0 1101 aa23.12■■□□□ 1.29
CCDC78-207ENST00000466708 AMNQ9BXJ7 453 aa23.12■■□□□ 1.29
CCDC78-207ENST00000466708 VEZTQ9HBM0 779 aa23.12■■□□□ 1.29
CCDC78-207ENST00000466708 ATF5Q9Y2D1 282 aaPredicted RBP23.12■■□□□ 1.29
CCDC78-207ENST00000466708 BRCA1P38398 1863 aaKnown RBP23.12■■□□□ 1.29
CCDC78-207ENST00000466708 PPP1R3GB7ZBB8 358 aa23.11■■□□□ 1.29
CCDC78-207ENST00000466708 CDK11BP21127 795 aaKnown RBP23.11■■□□□ 1.29
CCDC78-207ENST00000466708 TECP42680 631 aa23.11■■□□□ 1.29
CCDC78-207ENST00000466708 PDIA5Q14554 519 aa23.11■■□□□ 1.29
CCDC78-207ENST00000466708 TNIP1Q15025 636 aa23.11■■□□□ 1.29
CCDC78-207ENST00000466708 UBE2SQ16763 222 aa23.11■■□□□ 1.29
CCDC78-207ENST00000466708 ZNF658Q5TYW1 1059 aaPredicted RBP23.11■■□□□ 1.29
CCDC78-207ENST00000466708 EDIL3O43854 480 aa23.1■■□□□ 1.29
CCDC78-207ENST00000466708 TERF1P54274 439 aa23.1■■□□□ 1.29
CCDC78-207ENST00000466708 KCNB1Q14721 858 aa23.1■■□□□ 1.29
CCDC78-207ENST00000466708 MED15Q96RN5 788 aa23.1■■□□□ 1.29
CCDC78-207ENST00000466708 TMX2Q9Y320 296 aa23.1■■□□□ 1.29
CCDC78-207ENST00000466708 SYNRGQ9UMZ2 1314 aa23.1■■□□□ 1.29
CCDC78-207ENST00000466708 TMEM232C9JQI7 657 aa23.1■■□□□ 1.29
CCDC78-207ENST00000466708 CD44P16070 742 aaKnown RBP23.1■■□□□ 1.29
CCDC78-207ENST00000466708 TRMT44Q8IYL2 757 aaKnown RBP23.1■■□□□ 1.29
CCDC78-207ENST00000466708 CALML4Q96GE6 196 aa23.1■■□□□ 1.29
CCDC78-207ENST00000466708 A0A1W2PRG0 241 aa23.09■■□□□ 1.29
CCDC78-207ENST00000466708 TDP2O95551 362 aa23.09■■□□□ 1.29
CCDC78-207ENST00000466708 TXKP42681 527 aa23.09■■□□□ 1.29
CCDC78-207ENST00000466708 TRAF1Q13077 416 aa23.09■■□□□ 1.29
CCDC78-207ENST00000466708 IKQ13123 557 aaPredicted RBP23.09■■□□□ 1.29
CCDC78-207ENST00000466708 AP3B2Q13367 1082 aa23.09■■□□□ 1.29
CCDC78-207ENST00000466708 FBXO11Q86XK2 927 aa23.09■■□□□ 1.29
CCDC78-207ENST00000466708 TEX2Q8IWB9 1127 aa23.09■■□□□ 1.29
CCDC78-207ENST00000466708 C17orf53Q8N3J3 647 aaPredicted RBP23.09■■□□□ 1.29
CCDC78-207ENST00000466708 NAP1L5Q96NT1 182 aaPredicted RBP23.09■■□□□ 1.29
CCDC78-207ENST00000466708 GOPCQ9HD26 462 aa23.09■■□□□ 1.29
CCDC78-207ENST00000466708 ZBTB21Q9ULJ3 1066 aa23.09■■□□□ 1.29
CCDC78-207ENST00000466708 WNT10BO00744 389 aa23.08■■□□□ 1.29
CCDC78-207ENST00000466708 SLC37A4O43826 429 aa23.08■■□□□ 1.29
CCDC78-207ENST00000466708 PLCG1P19174 1290 aa23.08■■□□□ 1.29
CCDC78-207ENST00000466708 RPS12P25398 132 aaKnown RBP23.08■■□□□ 1.29
CCDC78-207ENST00000466708 USP11P51784 963 aa23.08■■□□□ 1.29
CCDC78-207ENST00000466708 DPF2Q92785 391 aa23.08■■□□□ 1.29
CCDC78-207ENST00000466708 NUP88Q99567 741 aaPredicted RBP23.08■■□□□ 1.29
CCDC78-207ENST00000466708 GTPBP4Q9BZE4 634 aaKnown RBP23.08■■□□□ 1.29
CCDC78-207ENST00000466708 LRWD1Q9UFC0 647 aa23.08■■□□□ 1.29
CCDC78-207ENST00000466708 AMPD3Q01432 767 aa23.08■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms