RNA–Protein interactions for RNA: ENST00000466471.1

SORT1-202, Transcript of sortilin 1, humanhuman

TSL 2

Gene SORT1, Length 521 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SORT1-202ENST00000466471 ZNF587Q96SQ5 575 aaPredicted RBP4.23□□□□□ -1.73
SORT1-202ENST00000466471 MAP7D2Q96T17 732 aa4.23□□□□□ -1.73
SORT1-202ENST00000466471 HACL1Q9UJ83 578 aa4.23□□□□□ -1.73
SORT1-202ENST00000466471 FAN1Q9Y2M0 1017 aa4.23□□□□□ -1.73
SORT1-202ENST00000466471 RIPOR2Q9Y4F9 1068 aa4.23□□□□□ -1.73
SORT1-202ENST00000466471 ANKRD31Q8N7Z5 1873 aa4.23□□□□□ -1.73
SORT1-202ENST00000466471 MYH14Q7Z406 1995 aaKnown RBP4.23□□□□□ -1.73
SORT1-202ENST00000466471 SETXQ7Z333 2677 aaKnown RBP4.23□□□□□ -1.73
SORT1-202ENST00000466471 CGNL1Q0VF96 1302 aa4.22□□□□□ -1.73
SORT1-202ENST00000466471 CCDC163A0A0D9SF12 145 aa4.22□□□□□ -1.73
SORT1-202ENST00000466471 KRTAP9-6A0A140TA67 174 aa4.22□□□□□ -1.73
SORT1-202ENST00000466471 SPDYE3A6NKU9 549 aa4.22□□□□□ -1.73
SORT1-202ENST00000466471 MINDY4BA8MYZ0 360 aa4.22□□□□□ -1.73
SORT1-202ENST00000466471 PDGFRBP09619 1106 aa4.22□□□□□ -1.73
SORT1-202ENST00000466471 GYS1P13807 737 aa4.22□□□□□ -1.73
SORT1-202ENST00000466471 PTMSP20962 102 aa4.22□□□□□ -1.73
SORT1-202ENST00000466471 FCGRTP55899 365 aa4.22□□□□□ -1.73
SORT1-202ENST00000466471 EIF6P56537 245 aaKnown RBP4.22□□□□□ -1.73
SORT1-202ENST00000466471 TMF1P82094 1093 aa4.22□□□□□ -1.73
SORT1-202ENST00000466471 SLFN5Q08AF3 891 aa4.22□□□□□ -1.73
SORT1-202ENST00000466471 TRIM28Q13263 835 aaKnown RBP4.22□□□□□ -1.73
SORT1-202ENST00000466471 BECN1Q14457 450 aa4.22□□□□□ -1.73
SORT1-202ENST00000466471 TCEA2Q15560 299 aa4.22□□□□□ -1.73
SORT1-202ENST00000466471 GRIK4Q16099 956 aa4.22□□□□□ -1.73
SORT1-202ENST00000466471 NKAPLQ5M9Q1 402 aa4.22□□□□□ -1.73
SORT1-202ENST00000466471 SNAP47Q5SQN1 464 aa4.22□□□□□ -1.73
SORT1-202ENST00000466471 PEAR1Q5VY43 1037 aaPredicted RBP4.22□□□□□ -1.73
SORT1-202ENST00000466471 INTS3Q68E01 1043 aaKnown RBP4.22□□□□□ -1.73
SORT1-202ENST00000466471 RAB44Q7Z6P3 723 aaPredicted RBP4.22□□□□□ -1.73
SORT1-202ENST00000466471 CCNJLQ8IV13 435 aa4.22□□□□□ -1.73
SORT1-202ENST00000466471 DEFB123Q8N688 67 aa4.22□□□□□ -1.73
SORT1-202ENST00000466471 LINC00116Q8NCU8 138 aa4.22□□□□□ -1.73
SORT1-202ENST00000466471 ZNF280CQ8ND82 737 aa4.22□□□□□ -1.73
SORT1-202ENST00000466471 OR13H1Q8NG92 308 aa4.22□□□□□ -1.73
SORT1-202ENST00000466471 TBC1D32Q96NH3 1257 aa4.22□□□□□ -1.73
SORT1-202ENST00000466471 TESK2Q96S53 571 aa4.22□□□□□ -1.73
SORT1-202ENST00000466471 CRBNQ96SW2 442 aa4.22□□□□□ -1.73
SORT1-202ENST00000466471 PSMD1Q99460 953 aa4.22□□□□□ -1.73
SORT1-202ENST00000466471 SLC30A3Q99726 388 aa4.22□□□□□ -1.73
SORT1-202ENST00000466471 MDFIQ99750 246 aa4.22□□□□□ -1.73
SORT1-202ENST00000466471 C14orf93Q9H972 538 aaKnown RBP4.22□□□□□ -1.73
SORT1-202ENST00000466471 LIN7BQ9HAP6 207 aa4.22□□□□□ -1.73
SORT1-202ENST00000466471 MTMR10Q9NXD2 777 aa4.22□□□□□ -1.73
SORT1-202ENST00000466471 RNF186Q9NXI6 227 aa4.22□□□□□ -1.73
SORT1-202ENST00000466471 ACTR10Q9NZ32 417 aa4.22□□□□□ -1.73
SORT1-202ENST00000466471 CNTN3Q9P232 1028 aa4.22□□□□□ -1.73
SORT1-202ENST00000466471 CHPF2Q9P2E5 772 aa4.22□□□□□ -1.73
SORT1-202ENST00000466471 SALL4Q9UJQ4 1053 aa4.22□□□□□ -1.73
SORT1-202ENST00000466471 STARD13Q9Y3M8 1113 aa4.22□□□□□ -1.73
SORT1-202ENST00000466471 SAMM50Q9Y512 469 aa4.22□□□□□ -1.73
SORT1-202ENST00000466471 TRANK1O15050 2925 aa4.22□□□□□ -1.73
SORT1-202ENST00000466471 IBTKQ9P2D0 1353 aaPredicted RBP4.22□□□□□ -1.73
SORT1-202ENST00000466471 C5orf42Q9H799 3197 aa4.21□□□□□ -1.74
SORT1-202ENST00000466471 MAST4O15021 2626 aa4.21□□□□□ -1.74
SORT1-202ENST00000466471 TMEM265A0A087WTH1 108 aa4.21□□□□□ -1.74
SORT1-202ENST00000466471 CCDC194A0A1B0GVG4 234 aa4.21□□□□□ -1.74
SORT1-202ENST00000466471 FAM221BA6H8Z2 402 aa4.21□□□□□ -1.74
SORT1-202ENST00000466471 SMAD7O15105 426 aaKnown RBP4.21□□□□□ -1.74
SORT1-202ENST00000466471 DYRK3O43781 588 aa4.21□□□□□ -1.74
SORT1-202ENST00000466471 SIN3BO75182 1162 aa4.21□□□□□ -1.74
SORT1-202ENST00000466471 EIF3JO75822 258 aaKnown RBP4.21□□□□□ -1.74
SORT1-202ENST00000466471 ALBP02768 609 aa4.21□□□□□ -1.74
SORT1-202ENST00000466471 PF4P02776 101 aa4.21□□□□□ -1.74
SORT1-202ENST00000466471 PMLP29590 882 aa4.21□□□□□ -1.74
SORT1-202ENST00000466471 GYS2P54840 703 aa4.21□□□□□ -1.74
SORT1-202ENST00000466471 AMPD3Q01432 767 aa4.21□□□□□ -1.74
SORT1-202ENST00000466471 COL9A3Q14050 684 aaPredicted RBP4.21□□□□□ -1.74
SORT1-202ENST00000466471 HSP90AA2PQ14568 343 aaPredicted RBP4.21□□□□□ -1.74
SORT1-202ENST00000466471 CWF19L2Q2TBE0 894 aaKnown RBP4.21□□□□□ -1.74
SORT1-202ENST00000466471 GOLM1Q8NBJ4 401 aa4.21□□□□□ -1.74
SORT1-202ENST00000466471 GATAD2BQ8WXI9 593 aa4.21□□□□□ -1.74
SORT1-202ENST00000466471 SNX21Q969T3 373 aa4.21□□□□□ -1.74
SORT1-202ENST00000466471 ANAPC16Q96DE5 110 aa4.21□□□□□ -1.74
SORT1-202ENST00000466471 HSH2DQ96JZ2 352 aa4.21□□□□□ -1.74
SORT1-202ENST00000466471 PPP1R9BQ96SB3 815 aa4.21□□□□□ -1.74
SORT1-202ENST00000466471 TCF12Q99081 682 aa4.21□□□□□ -1.74
SORT1-202ENST00000466471 P2RX7Q99572 595 aaKnown RBP4.21□□□□□ -1.74
SORT1-202ENST00000466471 BHLHE41Q9C0J9 482 aaPredicted RBP4.21□□□□□ -1.74
SORT1-202ENST00000466471 UBP1Q9NZI7 540 aa4.21□□□□□ -1.74
SORT1-202ENST00000466471 POGKQ9P215 609 aa4.21□□□□□ -1.74
SORT1-202ENST00000466471 ZNRF3Q9ULT6 936 aa4.21□□□□□ -1.74
SORT1-202ENST00000466471 CYP8B1Q9UNU6 501 aa4.21□□□□□ -1.74
SORT1-202ENST00000466471 MAPK8IP1Q9UQF2 711 aa4.21□□□□□ -1.74
SORT1-202ENST00000466471 SLC12A7Q9Y666 1083 aa4.21□□□□□ -1.74
SORT1-202ENST00000466471 MRVI1Q9Y6F6 885 aa4.21□□□□□ -1.74
SORT1-202ENST00000466471 RGPD2P0DJD1 1756 aa4.21□□□□□ -1.74
SORT1-202ENST00000466471 USP34Q70CQ2 3546 aa4.21□□□□□ -1.74
SORT1-202ENST00000466471 ANKRD26Q9UPS8 1709 aa4.21□□□□□ -1.74
SORT1-202ENST00000466471 KDM3BQ7LBC6 1761 aa4.2□□□□□ -1.74
SORT1-202ENST00000466471 KDRP35968 1356 aa4.2□□□□□ -1.74
SORT1-202ENST00000466471 ST20-MTHFSA0A0A6YYL1 179 aa4.2□□□□□ -1.74
SORT1-202ENST00000466471 GOLGA6L3A6NEY3 463 aa4.2□□□□□ -1.74
SORT1-202ENST00000466471 ADARB2-AS1A8MUL3 147 aa4.2□□□□□ -1.74
SORT1-202ENST00000466471 FAM155AB1AL88 458 aaPredicted RBP4.2□□□□□ -1.74
SORT1-202ENST00000466471 EIF4EBP3O60516 100 aaPredicted RBP4.2□□□□□ -1.74
SORT1-202ENST00000466471 TRPA1O75762 1119 aa4.2□□□□□ -1.74
SORT1-202ENST00000466471 POLR3DP05423 398 aaPredicted RBP4.2□□□□□ -1.74
SORT1-202ENST00000466471 HSP90AA1P07900 732 aaKnown RBP4.2□□□□□ -1.74
SORT1-202ENST00000466471 MCM4P33991 863 aa4.2□□□□□ -1.74
SORT1-202ENST00000466471 MASP1P48740 699 aa4.2□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms