RNA–Protein interactions for RNA: ENST00000466379.1

UBE4B-206, Transcript of ubiquitination factor E4B, humanhuman

TSL 2

Gene UBE4B, Length 2,299 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4B-206ENST00000466379 RIC8AQ9NPQ8 531 aa15.34■□□□□ 0.05
UBE4B-206ENST00000466379 FRMD4AQ9P2Q2 1039 aaPredicted RBP15.34■□□□□ 0.05
UBE4B-206ENST00000466379 SLC37A4O43826 429 aa15.34■□□□□ 0.05
UBE4B-206ENST00000466379 NDUFB10O96000 172 aa15.34■□□□□ 0.05
UBE4B-206ENST00000466379 TAL1P17542 331 aaPredicted RBP15.34■□□□□ 0.05
UBE4B-206ENST00000466379 CDC37Q16543 378 aaPredicted RBP15.34■□□□□ 0.05
UBE4B-206ENST00000466379 DALRD3Q5D0E6 543 aaKnown RBP15.34■□□□□ 0.05
UBE4B-206ENST00000466379 KLHL10Q6JEL2 608 aa15.34■□□□□ 0.05
UBE4B-206ENST00000466379 SPICE1Q8N0Z3 855 aa15.34■□□□□ 0.05
UBE4B-206ENST00000466379 TMEM39BQ9GZU3 492 aa15.34■□□□□ 0.05
UBE4B-206ENST00000466379 DISC1Q9NRI5 854 aa15.34■□□□□ 0.05
UBE4B-206ENST00000466379 COL2A1P02458 1487 aaPredicted RBP15.34■□□□□ 0.05
UBE4B-206ENST00000466379 LAD1O00515 517 aa15.33■□□□□ 0.05
UBE4B-206ENST00000466379 SERPINC1P01008 464 aa15.33■□□□□ 0.05
UBE4B-206ENST00000466379 PRPHP41219 470 aa15.33■□□□□ 0.05
UBE4B-206ENST00000466379 UBA7P41226 1012 aa15.33■□□□□ 0.05
UBE4B-206ENST00000466379 TECP42680 631 aa15.33■□□□□ 0.05
UBE4B-206ENST00000466379 TGFB2P61812 414 aa15.33■□□□□ 0.05
UBE4B-206ENST00000466379 NAALADL2Q58DX5 795 aa15.33■□□□□ 0.05
UBE4B-206ENST00000466379 PPP1R18Q6NYC8 613 aa15.33■□□□□ 0.05
UBE4B-206ENST00000466379 TMC6Q7Z403 805 aa15.33■□□□□ 0.05
UBE4B-206ENST00000466379 LRRC15Q8TF66 581 aa15.33■□□□□ 0.05
UBE4B-206ENST00000466379 FAM151AQ8WW52 585 aa15.33■□□□□ 0.05
UBE4B-206ENST00000466379 DACH1Q9UI36 760 aa15.33■□□□□ 0.05
UBE4B-206ENST00000466379 NFE2L3Q9Y4A8 694 aa15.33■□□□□ 0.05
UBE4B-206ENST00000466379 COBLO75128 1261 aa15.33■□□□□ 0.04
UBE4B-206ENST00000466379 POLD1P28340 1107 aa15.33■□□□□ 0.04
UBE4B-206ENST00000466379 ECE1P42892 770 aa15.33■□□□□ 0.04
UBE4B-206ENST00000466379 STX17P56962 302 aa15.33■□□□□ 0.04
UBE4B-206ENST00000466379 IKQ13123 557 aaPredicted RBP15.33■□□□□ 0.04
UBE4B-206ENST00000466379 RRAGBQ5VZM2 374 aa15.33■□□□□ 0.04
UBE4B-206ENST00000466379 MIGA2Q7L4E1 593 aa15.33■□□□□ 0.04
UBE4B-206ENST00000466379 CUL5Q93034 780 aa15.33■□□□□ 0.04
UBE4B-206ENST00000466379 GTPBP6O43824 516 aaPredicted RBP15.32■□□□□ 0.04
UBE4B-206ENST00000466379 TXKP42681 527 aa15.32■□□□□ 0.04
UBE4B-206ENST00000466379 NBPF9Q3BBW0 867 aa15.32■□□□□ 0.04
UBE4B-206ENST00000466379 PDZRN4Q6ZMN7 1036 aaPredicted RBP15.32■□□□□ 0.04
UBE4B-206ENST00000466379 LRRC8AQ8IWT6 810 aa15.32■□□□□ 0.04
UBE4B-206ENST00000466379 GSDMAQ96QA5 445 aa15.32■□□□□ 0.04
UBE4B-206ENST00000466379 TAOK3Q9H2K8 898 aa15.32■□□□□ 0.04
UBE4B-206ENST00000466379 PSTPIP2Q9H939 334 aa15.32■□□□□ 0.04
UBE4B-206ENST00000466379 HERC5Q9UII4 1024 aaKnown RBP15.32■□□□□ 0.04
UBE4B-206ENST00000466379 USP17L15C9J2P7 530 aa15.32■□□□□ 0.04
UBE4B-206ENST00000466379 USP17L13C9JLJ4 530 aa15.32■□□□□ 0.04
UBE4B-206ENST00000466379 TMEM232C9JQI7 657 aa15.32■□□□□ 0.04
UBE4B-206ENST00000466379 USP17L11C9JVI0 530 aa15.32■□□□□ 0.04
UBE4B-206ENST00000466379 USP17L18D6R9N7 530 aa15.32■□□□□ 0.04
UBE4B-206ENST00000466379 USP17L22D6RA61 530 aa15.32■□□□□ 0.04
UBE4B-206ENST00000466379 USP17L17D6RBQ6 530 aa15.32■□□□□ 0.04
UBE4B-206ENST00000466379 USP17L19D6RCP7 530 aa15.32■□□□□ 0.04
UBE4B-206ENST00000466379 USP17L20D6RJB6 530 aa15.32■□□□□ 0.04
UBE4B-206ENST00000466379 CLK2P49760 499 aaKnown RBP15.32■□□□□ 0.04
UBE4B-206ENST00000466379 UBASH3AP57075 661 aa15.32■□□□□ 0.04
UBE4B-206ENST00000466379 USP17L24Q0WX57 530 aa15.32■□□□□ 0.04
UBE4B-206ENST00000466379 R3HDM1Q15032 1099 aaKnown RBP15.32■□□□□ 0.04
UBE4B-206ENST00000466379 KIAA1755Q5JYT7 1200 aa15.32■□□□□ 0.04
UBE4B-206ENST00000466379 USP17L6PQ6QN14 398 aa15.32■□□□□ 0.04
UBE4B-206ENST00000466379 CABP7Q86V35 215 aa15.32■□□□□ 0.04
UBE4B-206ENST00000466379 GMCL1P1Q8NEA9 526 aa15.32■□□□□ 0.04
UBE4B-206ENST00000466379 AGBL3Q8NEM8 1001 aa15.32■□□□□ 0.04
UBE4B-206ENST00000466379 ACER1Q8TDN7 264 aa15.32■□□□□ 0.04
UBE4B-206ENST00000466379 PYM1Q9BRP8 204 aaKnown RBP15.32■□□□□ 0.04
UBE4B-206ENST00000466379 SAMSN1Q9NSI8 373 aaKnown RBP15.32■□□□□ 0.04
UBE4B-206ENST00000466379 PCDHA1Q9Y5I3 950 aa15.32■□□□□ 0.04
UBE4B-206ENST00000466379 NFKBIEO00221 500 aa15.31■□□□□ 0.04
UBE4B-206ENST00000466379 CALCRLQ16602 461 aa15.31■□□□□ 0.04
UBE4B-206ENST00000466379 ENOX1Q8TC92 643 aaKnown RBP15.31■□□□□ 0.04
UBE4B-206ENST00000466379 CCSER1Q9C0I3 900 aa15.31■□□□□ 0.04
UBE4B-206ENST00000466379 MTFR1LQ9H019 292 aa15.31■□□□□ 0.04
UBE4B-206ENST00000466379 VPS33BQ9H267 617 aa15.31■□□□□ 0.04
UBE4B-206ENST00000466379 PPP1R3GB7ZBB8 358 aa15.31■□□□□ 0.04
UBE4B-206ENST00000466379 PLCG1P19174 1290 aa15.31■□□□□ 0.04
UBE4B-206ENST00000466379 MRPL12P52815 198 aaKnown RBP15.31■□□□□ 0.04
UBE4B-206ENST00000466379 USH1GQ495M9 461 aa15.31■□□□□ 0.04
UBE4B-206ENST00000466379 CIAPIN1Q6FI81 312 aa15.31■□□□□ 0.04
UBE4B-206ENST00000466379 GJA10Q969M2 543 aa15.31■□□□□ 0.04
UBE4B-206ENST00000466379 GMCL1Q96IK5 515 aa15.31■□□□□ 0.04
UBE4B-206ENST00000466379 UIMC1Q96RL1 719 aa15.31■□□□□ 0.04
UBE4B-206ENST00000466379 R3HCC1Q9Y3T6 440 aaKnown RBP15.31■□□□□ 0.04
UBE4B-206ENST00000466379 FER1L6Q2WGJ9 1857 aa15.3■□□□□ 0.04
UBE4B-206ENST00000466379 BRCA1P38398 1863 aaKnown RBP15.3■□□□□ 0.04
UBE4B-206ENST00000466379 UTRNP46939 3433 aa15.3■□□□□ 0.04
UBE4B-206ENST00000466379 WNT10BO00744 389 aa15.3■□□□□ 0.04
UBE4B-206ENST00000466379 RPN1P04843 607 aaKnown RBP15.3■□□□□ 0.04
UBE4B-206ENST00000466379 BMP3P12645 472 aa15.3■□□□□ 0.04
UBE4B-206ENST00000466379 DNTTIP2Q5QJE6 756 aaKnown RBP15.3■□□□□ 0.04
UBE4B-206ENST00000466379 MTMR9Q96QG7 549 aa15.3■□□□□ 0.04
UBE4B-206ENST00000466379 SPTLC3Q9NUV7 552 aa15.3■□□□□ 0.04
UBE4B-206ENST00000466379 CTNND2Q9UQB3 1225 aa15.3■□□□□ 0.04
UBE4B-206ENST00000466379 BCS1LQ9Y276 419 aa15.3■□□□□ 0.04
UBE4B-206ENST00000466379 MYH7BA7E2Y1 1941 aa15.3■□□□□ 0.04
UBE4B-206ENST00000466379 EGFRP00533 1210 aa15.29■□□□□ 0.04
UBE4B-206ENST00000466379 CDK11BP21127 795 aaKnown RBP15.29■□□□□ 0.04
UBE4B-206ENST00000466379 ZYXQ15942 572 aaKnown RBP15.29■□□□□ 0.04
UBE4B-206ENST00000466379 SYDE2Q5VT97 1194 aa15.29■□□□□ 0.04
UBE4B-206ENST00000466379 CCDC84Q86UT8 332 aaPredicted RBP15.29■□□□□ 0.04
UBE4B-206ENST00000466379 JDP2Q8WYK2 163 aa15.29■□□□□ 0.04
UBE4B-206ENST00000466379 MMTAG2Q9BU76 263 aaKnown RBP15.29■□□□□ 0.04
UBE4B-206ENST00000466379 MYOZ2Q9NPC6 264 aa15.29■□□□□ 0.04
UBE4B-206ENST00000466379 INTS13Q9NVM9 706 aa15.29■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms