RNA–Protein interactions for RNA: ENST00000466138.1

CSF3R-208, Transcript of colony stimulating factor 3 receptor, humanhuman

TSL 3

Gene CSF3R, Length 335 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSF3R-208ENST00000466138 WDR66Q8TBY9 1149 aa12.78□□□□□ -0.36
CSF3R-208ENST00000466138 RIN2Q8WYP3 895 aaPredicted RBP12.78□□□□□ -0.36
CSF3R-208ENST00000466138 GTF3C3Q9Y5Q9 886 aa12.78□□□□□ -0.36
CSF3R-208ENST00000466138 ZNF236Q9UL36 1845 aa12.78□□□□□ -0.36
CSF3R-208ENST00000466138 ROBO3Q96MS0 1386 aa12.78□□□□□ -0.36
CSF3R-208ENST00000466138 PI15O43692 258 aa12.77□□□□□ -0.37
CSF3R-208ENST00000466138 FCER1AP12319 257 aa12.77□□□□□ -0.37
CSF3R-208ENST00000466138 BTDP43251 543 aa12.77□□□□□ -0.37
CSF3R-208ENST00000466138 MTX1Q13505 466 aa12.77□□□□□ -0.37
CSF3R-208ENST00000466138 CTC1Q2NKJ3 1217 aa12.77□□□□□ -0.37
CSF3R-208ENST00000466138 EPC2Q52LR7 807 aa12.77□□□□□ -0.37
CSF3R-208ENST00000466138 CEP85Q6P2H3 762 aa12.77□□□□□ -0.37
CSF3R-208ENST00000466138 PRR23BQ6ZRT6 265 aa12.77□□□□□ -0.37
CSF3R-208ENST00000466138 ANKRD44Q8N8A2 993 aa12.77□□□□□ -0.37
CSF3R-208ENST00000466138 SLC43A3Q8NBI5 491 aa12.77□□□□□ -0.37
CSF3R-208ENST00000466138 RTKNQ9BST9 563 aa12.77□□□□□ -0.37
CSF3R-208ENST00000466138 SEMA4AQ9H3S1 761 aa12.77□□□□□ -0.37
CSF3R-208ENST00000466138 RPAP3Q9H6T3 665 aaPredicted RBP12.77□□□□□ -0.37
CSF3R-208ENST00000466138 C1orf115Q9H7X2 142 aa12.77□□□□□ -0.37
CSF3R-208ENST00000466138 HDAC5Q9UQL6 1122 aa12.77□□□□□ -0.37
CSF3R-208ENST00000466138 GJB5O95377 273 aa12.76□□□□□ -0.37
CSF3R-208ENST00000466138 PROS1P07225 676 aa12.76□□□□□ -0.37
CSF3R-208ENST00000466138 VCAM1P19320 739 aa12.76□□□□□ -0.37
CSF3R-208ENST00000466138 ZNF200P98182 395 aaPredicted RBP12.76□□□□□ -0.37
CSF3R-208ENST00000466138 KREMEN2Q8NCW0 462 aa12.76□□□□□ -0.37
CSF3R-208ENST00000466138 PPP1R13LQ8WUF5 828 aa12.76□□□□□ -0.37
CSF3R-208ENST00000466138 MMP19Q99542 508 aa12.76□□□□□ -0.37
CSF3R-208ENST00000466138 BICC1Q9H694 974 aaKnown RBP12.76□□□□□ -0.37
CSF3R-208ENST00000466138 PPP4R2Q9NY27 417 aa12.76□□□□□ -0.37
CSF3R-208ENST00000466138 IGHDP01880 384 aa12.75□□□□□ -0.37
CSF3R-208ENST00000466138 POLA2Q14181 598 aa12.75□□□□□ -0.37
CSF3R-208ENST00000466138 SSH3Q8TE77 659 aa12.75□□□□□ -0.37
CSF3R-208ENST00000466138 NCDNQ9UBB6 729 aa12.75□□□□□ -0.37
CSF3R-208ENST00000466138 USP15Q9Y4E8 981 aaPredicted RBP12.75□□□□□ -0.37
CSF3R-208ENST00000466138 FRYLO94915 3013 aa12.74□□□□□ -0.37
CSF3R-208ENST00000466138 PNMA6EA0A0J9YXQ4 647 aa12.74□□□□□ -0.37
CSF3R-208ENST00000466138 C1QTNF9BB2RNN3 333 aa12.74□□□□□ -0.37
CSF3R-208ENST00000466138 NCK2O43639 380 aa12.74□□□□□ -0.37
CSF3R-208ENST00000466138 BAIAP3O94812 1187 aa12.74□□□□□ -0.37
CSF3R-208ENST00000466138 C1QTNF9P0C862 333 aa12.74□□□□□ -0.37
CSF3R-208ENST00000466138 PTGS1P23219 599 aa12.74□□□□□ -0.37
CSF3R-208ENST00000466138 RFX5P48382 616 aaPredicted RBP12.74□□□□□ -0.37
CSF3R-208ENST00000466138 GJA9P57773 515 aa12.74□□□□□ -0.37
CSF3R-208ENST00000466138 HDAC1Q13547 482 aaPredicted RBP12.74□□□□□ -0.37
CSF3R-208ENST00000466138 LBX2Q6XYB7 198 aa12.74□□□□□ -0.37
CSF3R-208ENST00000466138 NOL8Q76FK4 1167 aaKnown RBP12.74□□□□□ -0.37
CSF3R-208ENST00000466138 HNRNPABQ99729 332 aaKnown RBP12.74□□□□□ -0.37
CSF3R-208ENST00000466138 PHF7Q9BWX1 381 aaPredicted RBP12.74□□□□□ -0.37
CSF3R-208ENST00000466138 ZBTB21Q9ULJ3 1066 aa12.74□□□□□ -0.37
CSF3R-208ENST00000466138 CDK5RAP2Q96SN8 1893 aa12.74□□□□□ -0.37
CSF3R-208ENST00000466138 H3BNC9 293 aa12.73□□□□□ -0.37
CSF3R-208ENST00000466138 CTAGE5O15320 804 aa12.73□□□□□ -0.37
CSF3R-208ENST00000466138 BRD1O95696 1058 aa12.73□□□□□ -0.37
CSF3R-208ENST00000466138 SNAI1O95863 264 aaPredicted RBP12.73□□□□□ -0.37
CSF3R-208ENST00000466138 IQCF3P0C7M6 154 aa12.73□□□□□ -0.37
CSF3R-208ENST00000466138 ZNF792Q3KQV3 632 aa12.73□□□□□ -0.37
CSF3R-208ENST00000466138 METTL24Q5JXM2 366 aa12.73□□□□□ -0.37
CSF3R-208ENST00000466138 CCDC105Q8IYK2 499 aa12.73□□□□□ -0.37
CSF3R-208ENST00000466138 DTWD2Q8NBA8 298 aa12.73□□□□□ -0.37
CSF3R-208ENST00000466138 RETREG2Q8NC44 543 aa12.73□□□□□ -0.37
CSF3R-208ENST00000466138 ALDH8A1Q9H2A2 487 aaPredicted RBP12.73□□□□□ -0.37
CSF3R-208ENST00000466138 MROH8Q9H579 483 aa12.73□□□□□ -0.37
CSF3R-208ENST00000466138 RALGAPA2Q2PPJ7 1873 aa12.73□□□□□ -0.37
CSF3R-208ENST00000466138 RFC2P35250 354 aa12.72□□□□□ -0.37
CSF3R-208ENST00000466138 CCDC144BQ3MJ40 725 aa12.72□□□□□ -0.37
CSF3R-208ENST00000466138 ABRAQ8N0Z2 381 aa12.72□□□□□ -0.37
CSF3R-208ENST00000466138 UPF3AQ9H1J1 476 aaKnown RBP12.72□□□□□ -0.37
CSF3R-208ENST00000466138 USP18Q9UMW8 372 aa12.72□□□□□ -0.37
CSF3R-208ENST00000466138 NAV2Q8IVL1 2488 aa12.72□□□□□ -0.37
CSF3R-208ENST00000466138 CLCN5P51795 746 aa12.71□□□□□ -0.37
CSF3R-208ENST00000466138 CWF19L1Q69YN2 538 aaKnown RBP12.71□□□□□ -0.37
CSF3R-208ENST00000466138 DZIP1Q86YF9 867 aaKnown RBP12.71□□□□□ -0.37
CSF3R-208ENST00000466138 PPIL4Q8WUA2 492 aaKnown RBP eCLIP12.71□□□□□ -0.37
CSF3R-208ENST00000466138 MSLNLQ96KJ4 702 aa12.71□□□□□ -0.37
CSF3R-208ENST00000466138 C12orf42Q96LP6 360 aa12.71□□□□□ -0.37
CSF3R-208ENST00000466138 TRIM34Q9BYJ4 488 aa12.71□□□□□ -0.37
CSF3R-208ENST00000466138 TANGO6Q9C0B7 1094 aa12.71□□□□□ -0.37
CSF3R-208ENST00000466138 DCTPP1Q9H773 170 aa12.71□□□□□ -0.37
CSF3R-208ENST00000466138 PRR5-ARHGAP8B1AHC4 643 aa12.7□□□□□ -0.38
CSF3R-208ENST00000466138 SRGAP3O43295 1099 aa12.7□□□□□ -0.38
CSF3R-208ENST00000466138 EYA4O95677 639 aa12.7□□□□□ -0.38
CSF3R-208ENST00000466138 ARHGAP8P85298 464 aa12.7□□□□□ -0.38
CSF3R-208ENST00000466138 ADAM15Q13444 863 aa12.7□□□□□ -0.38
CSF3R-208ENST00000466138 TCTN1Q2MV58 587 aa12.7□□□□□ -0.38
CSF3R-208ENST00000466138 LRRC24Q50LG9 513 aa12.7□□□□□ -0.38
CSF3R-208ENST00000466138 ACER1Q8TDN7 264 aa12.7□□□□□ -0.38
CSF3R-208ENST00000466138 SIL1Q9H173 461 aa12.7□□□□□ -0.38
CSF3R-208ENST00000466138 RWDD1Q9H446 243 aaPredicted RBP12.7□□□□□ -0.38
CSF3R-208ENST00000466138 COPRSQ9NQ92 184 aa12.7□□□□□ -0.38
CSF3R-208ENST00000466138 HERC5Q9UII4 1024 aaKnown RBP12.7□□□□□ -0.38
CSF3R-208ENST00000466138 BARX2Q9UMQ3 279 aaPredicted RBP12.7□□□□□ -0.38
CSF3R-208ENST00000466138 NOP58Q9Y2X3 529 aaKnown RBP12.7□□□□□ -0.38
CSF3R-208ENST00000466138 MROH5Q6ZUA9 1318 aa12.69□□□□□ -0.38
CSF3R-208ENST00000466138 FRYQ5TBA9 3013 aa12.69□□□□□ -0.38
CSF3R-208ENST00000466138 TAF4O00268 1085 aa12.69□□□□□ -0.38
CSF3R-208ENST00000466138 GH2P01242 217 aa12.69□□□□□ -0.38
CSF3R-208ENST00000466138 LMNB2Q03252 620 aa12.69□□□□□ -0.38
CSF3R-208ENST00000466138 MTMR3Q13615 1198 aa12.69□□□□□ -0.38
CSF3R-208ENST00000466138 ACVR2BQ13705 512 aa12.69□□□□□ -0.38
CSF3R-208ENST00000466138 RAB3GAP1Q15042 981 aa12.69□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms