RNA–Protein interactions for RNA: ENST00000465877.1

COL5A1-206, Transcript of collagen type V alpha 1 chain, humanhuman

TSL 3

Gene COL5A1, Length 583 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1-206ENST00000465877 MSL3Q8N5Y2 521 aaKnown RBP15.03■□□□□ -0
COL5A1-206ENST00000465877 FAM133AQ8N9E0 248 aa15.03■□□□□ -0
COL5A1-206ENST00000465877 JMJD4Q9H9V9 463 aa15.03■□□□□ -0
COL5A1-206ENST00000465877 CYP39A1Q9NYL5 469 aa15.03■□□□□ -0
COL5A1-206ENST00000465877 DDX20Q9UHI6 824 aaKnown RBP15.03■□□□□ -0
COL5A1-206ENST00000465877 OGDHLQ9ULD0 1010 aa15.03■□□□□ -0
COL5A1-206ENST00000465877 ASTN1O14525 1302 aa15.02■□□□□ -0
COL5A1-206ENST00000465877 CCDC69A6NI79 296 aa15.02■□□□□ -0
COL5A1-206ENST00000465877 POTEB2H3BUK9 544 aa15.02■□□□□ -0
COL5A1-206ENST00000465877 EPB41L2O43491 1005 aaKnown RBP15.02■□□□□ -0
COL5A1-206ENST00000465877 MSCO60682 206 aa15.02■□□□□ -0
COL5A1-206ENST00000465877 TFRCP02786 760 aaKnown RBP15.02■□□□□ -0
COL5A1-206ENST00000465877 LIFRP42702 1097 aa15.02■□□□□ -0
COL5A1-206ENST00000465877 MAMDC4Q6UXC1 1216 aa15.02■□□□□ -0
COL5A1-206ENST00000465877 SLC30A10Q6XR72 485 aa15.02■□□□□ -0
COL5A1-206ENST00000465877 NFXL1Q6ZNB6 911 aa15.02■□□□□ -0
COL5A1-206ENST00000465877 ANKLE1Q8NAG6 615 aa15.02■□□□□ -0
COL5A1-206ENST00000465877 NUP133Q8WUM0 1156 aa15.02■□□□□ -0
COL5A1-206ENST00000465877 CLEC4DQ8WXI8 215 aa15.02■□□□□ -0
COL5A1-206ENST00000465877 KCNB2Q92953 911 aa15.02■□□□□ -0
COL5A1-206ENST00000465877 TCEANC2Q96MN5 208 aa15.02■□□□□ -0
COL5A1-206ENST00000465877 NRBP1Q9UHY1 535 aa15.02■□□□□ -0
COL5A1-206ENST00000465877 SNX14Q9Y5W7 946 aa15.02■□□□□ -0
COL5A1-206ENST00000465877 ABCB11O95342 1321 aa15.01□□□□□ -0.01
COL5A1-206ENST00000465877 SEPT4O43236 478 aa15.01□□□□□ -0.01
COL5A1-206ENST00000465877 CNTN2Q02246 1040 aa15.01□□□□□ -0.01
COL5A1-206ENST00000465877 SLC35G1Q2M3R5 365 aa15.01□□□□□ -0.01
COL5A1-206ENST00000465877 PRAMEF19Q5SWL8 479 aa15.01□□□□□ -0.01
COL5A1-206ENST00000465877 LHX8Q68G74 356 aa15.01□□□□□ -0.01
COL5A1-206ENST00000465877 ARMCX2Q7L311 632 aa15.01□□□□□ -0.01
COL5A1-206ENST00000465877 SGMS1Q86VZ5 419 aa15.01□□□□□ -0.01
COL5A1-206ENST00000465877 HOMER1Q86YM7 354 aa15.01□□□□□ -0.01
COL5A1-206ENST00000465877 CTCFLQ8NI51 663 aaPredicted RBP15.01□□□□□ -0.01
COL5A1-206ENST00000465877 DIS3LQ8TF46 1054 aaKnown RBP15.01□□□□□ -0.01
COL5A1-206ENST00000465877 MTMR8Q96EF0 704 aa15.01□□□□□ -0.01
COL5A1-206ENST00000465877 MAP3K14Q99558 947 aa15.01□□□□□ -0.01
COL5A1-206ENST00000465877 PTPDC1A2A3K4 754 aa15□□□□□ -0.01
COL5A1-206ENST00000465877 SOWAHBA6NEL2 793 aa15□□□□□ -0.01
COL5A1-206ENST00000465877 CYTH3O43739 400 aa15□□□□□ -0.01
COL5A1-206ENST00000465877 HMGB1P09429 215 aaKnown RBP15□□□□□ -0.01
COL5A1-206ENST00000465877 RXRAP19793 462 aa15□□□□□ -0.01
COL5A1-206ENST00000465877 DHX32Q7L7V1 743 aaKnown RBP15□□□□□ -0.01
COL5A1-206ENST00000465877 MICU3Q86XE3 530 aa15□□□□□ -0.01
COL5A1-206ENST00000465877 FBXO11Q86XK2 927 aa15□□□□□ -0.01
COL5A1-206ENST00000465877 CCDC144CPQ8IYA2 1237 aa15□□□□□ -0.01
COL5A1-206ENST00000465877 TMTC2Q8N394 836 aa15□□□□□ -0.01
COL5A1-206ENST00000465877 JAKMIP1Q96N16 626 aaKnown RBP15□□□□□ -0.01
COL5A1-206ENST00000465877 RIOX1Q9H6W3 641 aa15□□□□□ -0.01
COL5A1-206ENST00000465877 VAT1LQ9HCJ6 419 aa15□□□□□ -0.01
COL5A1-206ENST00000465877 CDKN2AIPQ9NXV6 580 aaPredicted RBP15□□□□□ -0.01
COL5A1-206ENST00000465877 CNPY2Q9Y2B0 182 aa15□□□□□ -0.01
COL5A1-206ENST00000465877 SLC12A7Q9Y666 1083 aa15□□□□□ -0.01
COL5A1-206ENST00000465877 ZBTB5O15062 677 aa14.99□□□□□ -0.01
COL5A1-206ENST00000465877 SNAI1O95863 264 aaPredicted RBP14.99□□□□□ -0.01
COL5A1-206ENST00000465877 ZNF865P0CJ78 1059 aaPredicted RBP14.99□□□□□ -0.01
COL5A1-206ENST00000465877 KIF5BP33176 963 aa14.99□□□□□ -0.01
COL5A1-206ENST00000465877 MNX1P50219 401 aaPredicted RBP14.99□□□□□ -0.01
COL5A1-206ENST00000465877 RPS6P62753 249 aaKnown RBP14.99□□□□□ -0.01
COL5A1-206ENST00000465877 BAATQ14032 418 aaPredicted RBP14.99□□□□□ -0.01
COL5A1-206ENST00000465877 ANO1Q5XXA6 986 aa14.99□□□□□ -0.01
COL5A1-206ENST00000465877 APOA5Q6Q788 366 aa14.99□□□□□ -0.01
COL5A1-206ENST00000465877 RNF207Q6ZRF8 634 aa14.99□□□□□ -0.01
COL5A1-206ENST00000465877 RAB11FIP4Q86YS3 637 aa14.99□□□□□ -0.01
COL5A1-206ENST00000465877 PIGSQ96S52 555 aa14.99□□□□□ -0.01
COL5A1-206ENST00000465877 ZHX1Q9UKY1 873 aaPredicted RBP14.99□□□□□ -0.01
COL5A1-206ENST00000465877 PPP1R11O60927 126 aaPredicted RBP14.98□□□□□ -0.01
COL5A1-206ENST00000465877 PLEKHA8P1O95397 391 aa14.98□□□□□ -0.01
COL5A1-206ENST00000465877 CALM1P0DP23 149 aa14.98□□□□□ -0.01
COL5A1-206ENST00000465877 CALM2P0DP24 149 aa14.98□□□□□ -0.01
COL5A1-206ENST00000465877 CALM3P0DP25 149 aa14.98□□□□□ -0.01
COL5A1-206ENST00000465877 AKR1A1P14550 325 aa14.98□□□□□ -0.01
COL5A1-206ENST00000465877 CPA1P15085 419 aa14.98□□□□□ -0.01
COL5A1-206ENST00000465877 CALML3P27482 149 aa14.98□□□□□ -0.01
COL5A1-206ENST00000465877 ALDH5A1P51649 535 aaPredicted RBP14.98□□□□□ -0.01
COL5A1-206ENST00000465877 EXOSC10Q01780 885 aaKnown RBP14.98□□□□□ -0.01
COL5A1-206ENST00000465877 BLOC1S2Q6QNY1 142 aa14.98□□□□□ -0.01
COL5A1-206ENST00000465877 LENG1Q96BZ8 264 aaPredicted RBP14.98□□□□□ -0.01
COL5A1-206ENST00000465877 PAWRQ96IZ0 340 aaKnown RBP14.98□□□□□ -0.01
COL5A1-206ENST00000465877 PURBQ96QR8 312 aaKnown RBP14.98□□□□□ -0.01
COL5A1-206ENST00000465877 SPZ1Q9BXG8 430 aa14.98□□□□□ -0.01
COL5A1-206ENST00000465877 AMNQ9BXJ7 453 aa14.98□□□□□ -0.01
COL5A1-206ENST00000465877 KATNBL1Q9H079 304 aa14.98□□□□□ -0.01
COL5A1-206ENST00000465877 ADD3Q9UEY8 706 aaKnown RBP14.98□□□□□ -0.01
COL5A1-206ENST00000465877 CEP290O15078 2479 aa14.97□□□□□ -0.01
COL5A1-206ENST00000465877 ASB14A6NK59 587 aa14.97□□□□□ -0.01
COL5A1-206ENST00000465877 CASTP20810 708 aaKnown RBP14.97□□□□□ -0.01
COL5A1-206ENST00000465877 NECAB2Q7Z6G3 386 aa14.97□□□□□ -0.01
COL5A1-206ENST00000465877 USP26Q9BXU7 913 aa14.97□□□□□ -0.01
COL5A1-206ENST00000465877 ABHD16BQ9H3Z7 469 aa14.97□□□□□ -0.01
COL5A1-206ENST00000465877 MRPL11Q9Y3B7 192 aaKnown RBP14.97□□□□□ -0.01
COL5A1-206ENST00000465877 DDX49Q9Y6V7 483 aaKnown RBP14.97□□□□□ -0.01
COL5A1-206ENST00000465877 NID2Q14112 1375 aa14.97□□□□□ -0.01
COL5A1-206ENST00000465877 LTBP2Q14767 1821 aa14.96□□□□□ -0.01
COL5A1-206ENST00000465877 CNTNAP5Q8WYK1 1306 aa14.96□□□□□ -0.01
COL5A1-206ENST00000465877 SYNRGQ9UMZ2 1314 aa14.96□□□□□ -0.01
COL5A1-206ENST00000465877 LOC102724159A0A0B4J2E5 919 aa14.96□□□□□ -0.01
COL5A1-206ENST00000465877 KLF18A0A0U1RQI7 1052 aa14.96□□□□□ -0.01
COL5A1-206ENST00000465877 DNM1LO00429 736 aa14.96□□□□□ -0.01
COL5A1-206ENST00000465877 OPLAHO14841 1288 aa14.96□□□□□ -0.01
COL5A1-206ENST00000465877 ADCY6O43306 1168 aa14.96□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms