RNA–Protein interactions for RNA: ENST00000465756.5

NPHP3-203, Transcript of nephrocystin 3, humanhuman

TSL 5

Gene NPHP3, Length 3,852 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP3-203ENST00000465756 NMT2O60551 498 aa12.46□□□□□ -0.42
NPHP3-203ENST00000465756 SNHG28P0DPA3 235 aa12.46□□□□□ -0.42
NPHP3-203ENST00000465756 SMARCC2Q8TAQ2 1214 aa12.46□□□□□ -0.42
NPHP3-203ENST00000465756 C22orf23Q9BZE7 217 aa12.46□□□□□ -0.42
NPHP3-203ENST00000465756 DDX20Q9UHI6 824 aaKnown RBP12.46□□□□□ -0.42
NPHP3-203ENST00000465756 PNMA6FA0A0J9YX94 578 aa12.45□□□□□ -0.42
NPHP3-203ENST00000465756 GCOM1H8Y6P7 765 aaPredicted RBP12.45□□□□□ -0.42
NPHP3-203ENST00000465756 SEPT4O43236 478 aa12.45□□□□□ -0.42
NPHP3-203ENST00000465756 POLR2MP0CAP2 368 aa12.45□□□□□ -0.42
NPHP3-203ENST00000465756 NECTIN1Q15223 517 aa12.45□□□□□ -0.42
NPHP3-203ENST00000465756 CCDC148Q8NFR7 591 aa12.45□□□□□ -0.42
NPHP3-203ENST00000465756 GNPTABQ3T906 1256 aa12.45□□□□□ -0.42
NPHP3-203ENST00000465756 NSUN6Q8TEA1 469 aaKnown RBP12.45□□□□□ -0.42
NPHP3-203ENST00000465756 WASF1Q92558 559 aa12.45□□□□□ -0.42
NPHP3-203ENST00000465756 SPZ1Q9BXG8 430 aa12.45□□□□□ -0.42
NPHP3-203ENST00000465756 TM6SF1Q9BZW5 370 aa12.45□□□□□ -0.42
NPHP3-203ENST00000465756 UNC93B1Q9H1C4 597 aa12.45□□□□□ -0.42
NPHP3-203ENST00000465756 SH2B2O14492 632 aaPredicted RBP12.45□□□□□ -0.42
NPHP3-203ENST00000465756 FOXP2O15409 715 aa12.45□□□□□ -0.42
NPHP3-203ENST00000465756 EVX2Q03828 476 aa12.45□□□□□ -0.42
NPHP3-203ENST00000465756 HOMER1Q86YM7 354 aa12.45□□□□□ -0.42
NPHP3-203ENST00000465756 DAXXQ9UER7 740 aaPredicted RBP12.45□□□□□ -0.42
NPHP3-203ENST00000465756 KPNA6O60684 536 aa12.44□□□□□ -0.42
NPHP3-203ENST00000465756 SLC16A2P36021 539 aa12.44□□□□□ -0.42
NPHP3-203ENST00000465756 MAML3Q96JK9 1138 aa12.44□□□□□ -0.42
NPHP3-203ENST00000465756 TLR3O15455 904 aaKnown RBP12.44□□□□□ -0.42
NPHP3-203ENST00000465756 MYCNP04198 464 aaPredicted RBP12.44□□□□□ -0.42
NPHP3-203ENST00000465756 CALML3P27482 149 aa12.44□□□□□ -0.42
NPHP3-203ENST00000465756 HSPA4P34932 840 aa12.44□□□□□ -0.42
NPHP3-203ENST00000465756 METAP2P50579 478 aaKnown RBP eCLIP12.44□□□□□ -0.42
NPHP3-203ENST00000465756 PPP1R18Q6NYC8 613 aa12.44□□□□□ -0.42
NPHP3-203ENST00000465756 BICD2Q8TD16 824 aa12.44□□□□□ -0.42
NPHP3-203ENST00000465756 DPF3Q92784 378 aa12.44□□□□□ -0.42
NPHP3-203ENST00000465756 IWS1Q96ST2 819 aa12.44□□□□□ -0.42
NPHP3-203ENST00000465756 LAMA4Q16363 1823 aa12.44□□□□□ -0.42
NPHP3-203ENST00000465756 CABYRO75952 493 aa12.44□□□□□ -0.42
NPHP3-203ENST00000465756 FAM177A1Q8N128 213 aaPredicted RBP12.44□□□□□ -0.42
NPHP3-203ENST00000465756 VTI1AQ96AJ9 217 aa12.44□□□□□ -0.42
NPHP3-203ENST00000465756 PCDHA1Q9Y5I3 950 aa12.44□□□□□ -0.42
NPHP3-203ENST00000465756 ARHGEF16Q5VV41 709 aa12.43□□□□□ -0.42
NPHP3-203ENST00000465756 XRRA1Q6P2D8 792 aa12.43□□□□□ -0.42
NPHP3-203ENST00000465756 SGMS1Q86VZ5 419 aa12.43□□□□□ -0.42
NPHP3-203ENST00000465756 USP6NLQ92738 828 aa12.43□□□□□ -0.42
NPHP3-203ENST00000465756 INCENPQ9NQS7 918 aa12.43□□□□□ -0.42
NPHP3-203ENST00000465756 CDKN2AIPQ9NXV6 580 aaPredicted RBP12.43□□□□□ -0.42
NPHP3-203ENST00000465756 KLF18A0A0U1RQI7 1052 aa12.43□□□□□ -0.42
NPHP3-203ENST00000465756 RGS19P49795 217 aa12.43□□□□□ -0.42
NPHP3-203ENST00000465756 SEC23AQ15436 765 aa12.43□□□□□ -0.42
NPHP3-203ENST00000465756 USH1GQ495M9 461 aa12.43□□□□□ -0.42
NPHP3-203ENST00000465756 MICU3Q86XE3 530 aa12.43□□□□□ -0.42
NPHP3-203ENST00000465756 TRIB2Q92519 343 aa12.43□□□□□ -0.42
NPHP3-203ENST00000465756 TNPO1Q92973 898 aaKnown RBP12.43□□□□□ -0.42
NPHP3-203ENST00000465756 CDHR1Q96JP9 859 aa12.43□□□□□ -0.42
NPHP3-203ENST00000465756 C11orf49Q9H6J7 331 aa12.43□□□□□ -0.42
NPHP3-203ENST00000465756 BRMS1Q9HCU9 246 aa12.43□□□□□ -0.42
NPHP3-203ENST00000465756 STAM2O75886 525 aa12.43□□□□□ -0.42
NPHP3-203ENST00000465756 FOSP01100 380 aaPredicted RBP12.43□□□□□ -0.42
NPHP3-203ENST00000465756 QRICH1Q2TAL8 776 aa12.43□□□□□ -0.42
NPHP3-203ENST00000465756 IQSEC1Q6DN90 963 aa12.43□□□□□ -0.42
NPHP3-203ENST00000465756 NLRX1Q86UT6 975 aa12.43□□□□□ -0.42
NPHP3-203ENST00000465756 ADGRF4Q8IZF3 695 aa12.43□□□□□ -0.42
NPHP3-203ENST00000465756 REPS2Q8NFH8 660 aa12.43□□□□□ -0.42
NPHP3-203ENST00000465756 UBA5Q9GZZ9 404 aa12.43□□□□□ -0.42
NPHP3-203ENST00000465756 POLR3EQ9NVU0 708 aa12.43□□□□□ -0.42
NPHP3-203ENST00000465756 SPDYE3A6NKU9 549 aa12.42□□□□□ -0.42
NPHP3-203ENST00000465756 TTLL4Q14679 1199 aa12.42□□□□□ -0.42
NPHP3-203ENST00000465756 GOLGA8HP0CJ92 632 aa12.42□□□□□ -0.42
NPHP3-203ENST00000465756 CASTP20810 708 aaKnown RBP12.42□□□□□ -0.42
NPHP3-203ENST00000465756 STXBP2Q15833 593 aa12.42□□□□□ -0.42
NPHP3-203ENST00000465756 CYB5R4Q7L1T6 521 aa12.42□□□□□ -0.42
NPHP3-203ENST00000465756 FANCBQ8NB91 859 aa12.42□□□□□ -0.42
NPHP3-203ENST00000465756 SCFD2Q8WU76 684 aa12.42□□□□□ -0.42
NPHP3-203ENST00000465756 AGBL1Q96MI9 1066 aa12.42□□□□□ -0.42
NPHP3-203ENST00000465756 GREB1LQ9C091 1923 aaPredicted RBP12.42□□□□□ -0.42
NPHP3-203ENST00000465756 PALM3A6NDB9 673 aaPredicted RBP12.42□□□□□ -0.42
NPHP3-203ENST00000465756 ZNF792Q3KQV3 632 aa12.42□□□□□ -0.42
NPHP3-203ENST00000465756 KIAA1755Q5JYT7 1200 aa12.42□□□□□ -0.42
NPHP3-203ENST00000465756 TTBK2Q6IQ55 1244 aa12.42□□□□□ -0.42
NPHP3-203ENST00000465756 TSEN34Q9BSV6 310 aaKnown RBP12.42□□□□□ -0.42
NPHP3-203ENST00000465756 PDRG1Q9NUG6 133 aa12.42□□□□□ -0.42
NPHP3-203ENST00000465756 SMIM22K7EJ46 135 aa12.41□□□□□ -0.42
NPHP3-203ENST00000465756 CFBP00751 764 aa12.41□□□□□ -0.42
NPHP3-203ENST00000465756 GNA11P29992 359 aa12.41□□□□□ -0.42
NPHP3-203ENST00000465756 CCND2P30279 289 aa12.41□□□□□ -0.42
NPHP3-203ENST00000465756 CACNB2Q08289 660 aaPredicted RBP12.41□□□□□ -0.42
NPHP3-203ENST00000465756 BAATQ14032 418 aaPredicted RBP12.41□□□□□ -0.42
NPHP3-203ENST00000465756 LBHD1Q9BQE6 289 aaPredicted RBP12.41□□□□□ -0.42
NPHP3-203ENST00000465756 A1CFQ9NQ94 594 aaKnown RBP12.41□□□□□ -0.42
NPHP3-203ENST00000465756 XPNPEP3Q9NQH7 507 aa12.41□□□□□ -0.42
NPHP3-203ENST00000465756 MGAMO43451 1857 aa12.41□□□□□ -0.42
NPHP3-203ENST00000465756 MROH7Q68CQ1 1323 aa12.41□□□□□ -0.42
NPHP3-203ENST00000465756 MAMDC4Q6UXC1 1216 aa12.41□□□□□ -0.42
NPHP3-203ENST00000465756 ARMCX2Q7L311 632 aa12.41□□□□□ -0.42
NPHP3-203ENST00000465756 C6orf50Q9HD87 102 aa12.41□□□□□ -0.42
NPHP3-203ENST00000465756 RPS6KB1P23443 525 aa12.41□□□□□ -0.42
NPHP3-203ENST00000465756 CYP2C19P33261 490 aa12.41□□□□□ -0.42
NPHP3-203ENST00000465756 ACVR2BQ13705 512 aa12.41□□□□□ -0.42
NPHP3-203ENST00000465756 GLT1D1Q96MS3 346 aa12.41□□□□□ -0.42
NPHP3-203ENST00000465756 PAK6Q9NQU5 681 aaPredicted RBP12.41□□□□□ -0.42
NPHP3-203ENST00000465756 Q9Y3F1 56 aa12.41□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms