RNA–Protein interactions for RNA: ENST00000465423.5

PCCB-206, Transcript of propionyl-CoA carboxylase subunit beta, humanhuman

TSL 4

Gene PCCB, Length 582 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCCB-206ENST00000465423 KBTBD13C9JR72 458 aa16.89■□□□□ 0.29
PCCB-206ENST00000465423 CALM1P0DP23 149 aa16.89■□□□□ 0.29
PCCB-206ENST00000465423 CALM2P0DP24 149 aa16.89■□□□□ 0.29
PCCB-206ENST00000465423 CALM3P0DP25 149 aa16.89■□□□□ 0.29
PCCB-206ENST00000465423 MCM2P49736 904 aa16.89■□□□□ 0.29
PCCB-206ENST00000465423 RCAN1P53805 252 aa16.89■□□□□ 0.29
PCCB-206ENST00000465423 LRRC41Q15345 812 aa16.89■□□□□ 0.29
PCCB-206ENST00000465423 C9orf50Q5SZB4 431 aa16.89■□□□□ 0.29
PCCB-206ENST00000465423 ANO1Q5XXA6 986 aa16.89■□□□□ 0.29
PCCB-206ENST00000465423 CATIPQ7Z7H3 387 aa16.89■□□□□ 0.29
PCCB-206ENST00000465423 ATG4CQ96DT6 458 aa16.89■□□□□ 0.29
PCCB-206ENST00000465423 MAML3Q96JK9 1138 aa16.89■□□□□ 0.29
PCCB-206ENST00000465423 FAM161BQ96MY7 647 aa16.89■□□□□ 0.29
PCCB-206ENST00000465423 VCPKMTQ9H867 229 aa16.89■□□□□ 0.29
PCCB-206ENST00000465423 GPHNQ9NQX3 736 aaPredicted RBP16.89■□□□□ 0.29
PCCB-206ENST00000465423 PDLIM7Q9NR12 457 aa16.89■□□□□ 0.29
PCCB-206ENST00000465423 SLC12A7Q9Y666 1083 aa16.89■□□□□ 0.29
PCCB-206ENST00000465423 MYH4Q9Y623 1939 aa16.89■□□□□ 0.29
PCCB-206ENST00000465423 COL11A1P12107 1806 aaPredicted RBP16.89■□□□□ 0.29
PCCB-206ENST00000465423 TRIM43BA6NCK2 446 aa16.88■□□□□ 0.29
PCCB-206ENST00000465423 F5H6K3 240 aa16.88■□□□□ 0.29
PCCB-206ENST00000465423 FLOT1O75955 427 aa16.88■□□□□ 0.29
PCCB-206ENST00000465423 DDAH1O94760 285 aa16.88■□□□□ 0.29
PCCB-206ENST00000465423 ADCYAP1R1P41586 468 aa16.88■□□□□ 0.29
PCCB-206ENST00000465423 KLRC3Q07444 240 aa16.88■□□□□ 0.29
PCCB-206ENST00000465423 TRIM60Q495X7 471 aa16.88■□□□□ 0.29
PCCB-206ENST00000465423 ZNF697Q5TEC3 545 aa16.88■□□□□ 0.29
PCCB-206ENST00000465423 SH3RF1Q7Z6J0 888 aa16.88■□□□□ 0.29
PCCB-206ENST00000465423 ZNF654Q8IZM8 581 aa16.88■□□□□ 0.29
PCCB-206ENST00000465423 LRRC47Q8N1G4 583 aaKnown RBP16.88■□□□□ 0.29
PCCB-206ENST00000465423 BADQ92934 168 aa16.88■□□□□ 0.29
PCCB-206ENST00000465423 TRIM43Q96BQ3 446 aaPredicted RBP16.88■□□□□ 0.29
PCCB-206ENST00000465423 MAP3K14Q99558 947 aa16.88■□□□□ 0.29
PCCB-206ENST00000465423 CDX2Q99626 313 aaPredicted RBP16.88■□□□□ 0.29
PCCB-206ENST00000465423 SEMA6BQ9H3T3 888 aa16.88■□□□□ 0.29
PCCB-206ENST00000465423 SENP2Q9HC62 589 aa16.88■□□□□ 0.29
PCCB-206ENST00000465423 NRBP1Q9UHY1 535 aa16.88■□□□□ 0.29
PCCB-206ENST00000465423 KLF18A0A0U1RQI7 1052 aa16.87■□□□□ 0.29
PCCB-206ENST00000465423 SMAD3P84022 425 aaKnown RBP16.87■□□□□ 0.29
PCCB-206ENST00000465423 APOBRQ0VD83 1088 aa16.87■□□□□ 0.29
PCCB-206ENST00000465423 TMEM132BQ14DG7 1078 aa16.87■□□□□ 0.29
PCCB-206ENST00000465423 APOA5Q6Q788 366 aa16.87■□□□□ 0.29
PCCB-206ENST00000465423 NCAPG2Q86XI2 1143 aa16.87■□□□□ 0.29
PCCB-206ENST00000465423 DCAF4Q8WV16 495 aa16.87■□□□□ 0.29
PCCB-206ENST00000465423 ZNF274Q96GC6 653 aaPredicted RBP16.87■□□□□ 0.29
PCCB-206ENST00000465423 GMCL1Q96IK5 515 aa16.87■□□□□ 0.29
PCCB-206ENST00000465423 PHF24Q9UPV7 400 aa16.87■□□□□ 0.29
PCCB-206ENST00000465423 PLXNA1Q9UIW2 1896 aa16.86■□□□□ 0.29
PCCB-206ENST00000465423 WDR46O15213 610 aaKnown RBP16.86■□□□□ 0.29
PCCB-206ENST00000465423 SLC25A27O95847 323 aa16.86■□□□□ 0.29
PCCB-206ENST00000465423 SNHG28P0DPA3 235 aa16.86■□□□□ 0.29
PCCB-206ENST00000465423 FCER1AP12319 257 aa16.86■□□□□ 0.29
PCCB-206ENST00000465423 TROAPQ12815 778 aa16.86■□□□□ 0.29
PCCB-206ENST00000465423 PLS1Q14651 629 aa16.86■□□□□ 0.29
PCCB-206ENST00000465423 PPP2R5BQ15173 497 aa16.86■□□□□ 0.29
PCCB-206ENST00000465423 SLFN13Q68D06 897 aa16.86■□□□□ 0.29
PCCB-206ENST00000465423 SPICE1Q8N0Z3 855 aa16.86■□□□□ 0.29
PCCB-206ENST00000465423 FERMT2Q96AC1 680 aa16.86■□□□□ 0.29
PCCB-206ENST00000465423 ZSCAN31Q96LW9 406 aaPredicted RBP16.86■□□□□ 0.29
PCCB-206ENST00000465423 BRPF3Q9ULD4 1205 aa16.86■□□□□ 0.29
PCCB-206ENST00000465423 LIMCH1Q9UPQ0 1083 aa16.86■□□□□ 0.29
PCCB-206ENST00000465423 ZBTB43O43298 467 aa16.85■□□□□ 0.29
PCCB-206ENST00000465423 NDUFB10O96000 172 aa16.85■□□□□ 0.29
PCCB-206ENST00000465423 PDHBP11177 359 aa16.85■□□□□ 0.29
PCCB-206ENST00000465423 ITGB8P26012 769 aa16.85■□□□□ 0.29
PCCB-206ENST00000465423 TLE2Q04725 743 aa16.85■□□□□ 0.29
PCCB-206ENST00000465423 ZNF792Q3KQV3 632 aa16.85■□□□□ 0.29
PCCB-206ENST00000465423 SNX21Q969T3 373 aa16.85■□□□□ 0.29
PCCB-206ENST00000465423 TTYH1Q9H313 450 aaPredicted RBP16.85■□□□□ 0.29
PCCB-206ENST00000465423 PRDM5Q9NQX1 630 aaPredicted RBP16.85■□□□□ 0.29
PCCB-206ENST00000465423 DIS3Q9Y2L1 958 aaKnown RBP16.85■□□□□ 0.29
PCCB-206ENST00000465423 RAD21O60216 631 aa16.84■□□□□ 0.29
PCCB-206ENST00000465423 PDIA3P30101 505 aaKnown RBP16.84■□□□□ 0.29
PCCB-206ENST00000465423 KIF5BP33176 963 aa16.84■□□□□ 0.29
PCCB-206ENST00000465423 SLC1A4P43007 532 aa16.84■□□□□ 0.29
PCCB-206ENST00000465423 GRM4Q14833 912 aa16.84■□□□□ 0.29
PCCB-206ENST00000465423 ASPRV1Q53RT3 343 aa16.84■□□□□ 0.29
PCCB-206ENST00000465423 GPATCH4Q5T3I0 446 aaKnown RBP16.84■□□□□ 0.29
PCCB-206ENST00000465423 RIOX2Q8IUF8 465 aa16.84■□□□□ 0.29
PCCB-206ENST00000465423 REPS2Q8NFH8 660 aa16.84■□□□□ 0.29
PCCB-206ENST00000465423 CTCFLQ8NI51 663 aaPredicted RBP16.84■□□□□ 0.29
PCCB-206ENST00000465423 NUP133Q8WUM0 1156 aa16.84■□□□□ 0.29
PCCB-206ENST00000465423 TINF2Q9BSI4 451 aa16.84■□□□□ 0.29
PCCB-206ENST00000465423 TPCN1Q9ULQ1 816 aa16.84■□□□□ 0.29
PCCB-206ENST00000465423 NID2Q14112 1375 aa16.84■□□□□ 0.29
PCCB-206ENST00000465423 CCDC196A0A1B0GTZ2 297 aa16.83■□□□□ 0.28
PCCB-206ENST00000465423 GOLGA8AA7E2F4 631 aa16.83■□□□□ 0.28
PCCB-206ENST00000465423 GOLGA8BA8MQT2 603 aa16.83■□□□□ 0.28
PCCB-206ENST00000465423 VWA5AO00534 786 aa16.83■□□□□ 0.28
PCCB-206ENST00000465423 PARP1P09874 1014 aaKnown RBP16.83■□□□□ 0.28
PCCB-206ENST00000465423 BMP3P12645 472 aa16.83■□□□□ 0.28
PCCB-206ENST00000465423 GNAQP50148 359 aa16.83■□□□□ 0.28
PCCB-206ENST00000465423 METAP2P50579 478 aaKnown RBP eCLIP16.83■□□□□ 0.28
PCCB-206ENST00000465423 MICU3Q86XE3 530 aa16.83■□□□□ 0.28
PCCB-206ENST00000465423 FANCBQ8NB91 859 aa16.83■□□□□ 0.28
PCCB-206ENST00000465423 CHMP4CQ96CF2 233 aa16.83■□□□□ 0.28
PCCB-206ENST00000465423 XPNPEP3Q9NQH7 507 aa16.83■□□□□ 0.28
PCCB-206ENST00000465423 SH2B1Q9NRF2 756 aaPredicted RBP16.83■□□□□ 0.28
PCCB-206ENST00000465423 FBXO28Q9NVF7 368 aa16.83■□□□□ 0.28
PCCB-206ENST00000465423 RBM28Q9NW13 759 aaKnown RBP16.83■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms