RNA–Protein interactions for RNA: ENST00000465269.5

HDAC6-214, Transcript of histone deacetylase 6, humanhuman

TSL 1 (best)

Gene HDAC6, Length 1,139 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-214ENST00000465269 ZFHX2Q9C0A1 2572 aaPredicted RBP18.04■□□□□ 0.48
HDAC6-214ENST00000465269 PTPRSQ13332 1948 aa18.04■□□□□ 0.48
HDAC6-214ENST00000465269 SOWAHBA6NEL2 793 aa18.03■□□□□ 0.48
HDAC6-214ENST00000465269 CABYRO75952 493 aa18.03■□□□□ 0.48
HDAC6-214ENST00000465269 NDUFB10O96000 172 aa18.03■□□□□ 0.48
HDAC6-214ENST00000465269 CSPP1Q1MSJ5 1256 aa18.03■□□□□ 0.48
HDAC6-214ENST00000465269 CCDC17Q96LX7 622 aa18.03■□□□□ 0.48
HDAC6-214ENST00000465269 AP5M1Q9H0R1 490 aa18.03■□□□□ 0.48
HDAC6-214ENST00000465269 KANSL2Q9H9L4 492 aa18.03■□□□□ 0.48
HDAC6-214ENST00000465269 TNKSO95271 1327 aa18.02■□□□□ 0.48
HDAC6-214ENST00000465269 USP17L12C9JPN9 530 aa18.02■□□□□ 0.48
HDAC6-214ENST00000465269 USP17L21D6R901 530 aa18.02■□□□□ 0.48
HDAC6-214ENST00000465269 MBD4O95243 580 aa18.02■□□□□ 0.48
HDAC6-214ENST00000465269 ATP8B2P98198 1209 aa18.02■□□□□ 0.48
HDAC6-214ENST00000465269 C12orf60Q5U649 245 aa18.02■□□□□ 0.48
HDAC6-214ENST00000465269 C16orf86Q6ZW13 317 aa18.02■□□□□ 0.48
HDAC6-214ENST00000465269 FBXO16Q8IX29 292 aaPredicted RBP18.02■□□□□ 0.48
HDAC6-214ENST00000465269 CHMP4CQ96CF2 233 aa18.02■□□□□ 0.48
HDAC6-214ENST00000465269 SLC9A7Q96T83 725 aa18.02■□□□□ 0.48
HDAC6-214ENST00000465269 FTOQ9C0B1 505 aaKnown RBP eCLIP18.02■□□□□ 0.48
HDAC6-214ENST00000465269 AACSQ86V21 672 aa18.01■□□□□ 0.47
HDAC6-214ENST00000465269 ARHGAP45Q92619 1136 aa18.01■□□□□ 0.47
HDAC6-214ENST00000465269 FRAT1Q92837 279 aaPredicted RBP18.01■□□□□ 0.47
HDAC6-214ENST00000465269 DNAJC2Q99543 621 aaKnown RBP18.01■□□□□ 0.47
HDAC6-214ENST00000465269 BCL11AQ9H165 835 aa18.01■□□□□ 0.47
HDAC6-214ENST00000465269 F5H6K3 240 aa18■□□□□ 0.47
HDAC6-214ENST00000465269 GOLIM4O00461 696 aa18■□□□□ 0.47
HDAC6-214ENST00000465269 ZBED4O75132 1171 aa18■□□□□ 0.47
HDAC6-214ENST00000465269 PFKMP08237 780 aa18■□□□□ 0.47
HDAC6-214ENST00000465269 ACTN1P12814 892 aa18■□□□□ 0.47
HDAC6-214ENST00000465269 KLRC3Q07444 240 aa18■□□□□ 0.47
HDAC6-214ENST00000465269 PTCRAQ6ISU1 281 aaPredicted RBP18■□□□□ 0.47
HDAC6-214ENST00000465269 FAM133AQ8N9E0 248 aa18■□□□□ 0.47
HDAC6-214ENST00000465269 PRPF38AQ8NAV1 312 aaKnown RBP18■□□□□ 0.47
HDAC6-214ENST00000465269 PURBQ96QR8 312 aaKnown RBP18■□□□□ 0.47
HDAC6-214ENST00000465269 SLC38A10Q9HBR0 1119 aa18■□□□□ 0.47
HDAC6-214ENST00000465269 CTDP1Q9Y5B0 961 aaPredicted RBP18■□□□□ 0.47
HDAC6-214ENST00000465269 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP17.99■□□□□ 0.47
HDAC6-214ENST00000465269 ATP2A1O14983 1001 aa17.99■□□□□ 0.47
HDAC6-214ENST00000465269 LEXMQ3ZCV2 418 aa17.99■□□□□ 0.47
HDAC6-214ENST00000465269 FAM47CQ5HY64 1035 aa17.99■□□□□ 0.47
HDAC6-214ENST00000465269 TAPT1Q6NXT6 567 aa17.99■□□□□ 0.47
HDAC6-214ENST00000465269 HFE2Q6ZVN8 426 aa17.99■□□□□ 0.47
HDAC6-214ENST00000465269 TMEM57Q8N5G2 664 aa17.99■□□□□ 0.47
HDAC6-214ENST00000465269 PHOSPHO2Q8TCD6 241 aa17.99■□□□□ 0.47
HDAC6-214ENST00000465269 PPIL4Q8WUA2 492 aaKnown RBP eCLIP17.99■□□□□ 0.47
HDAC6-214ENST00000465269 SUGCTQ9HAC7 445 aa17.99■□□□□ 0.47
HDAC6-214ENST00000465269 NOP58Q9Y2X3 529 aaKnown RBP17.99■□□□□ 0.47
HDAC6-214ENST00000465269 KIF28PB7ZC32 967 aa17.98■□□□□ 0.47
HDAC6-214ENST00000465269 H3BQ06 376 aaPredicted RBP17.98■□□□□ 0.47
HDAC6-214ENST00000465269 ZEB2O60315 1214 aa17.98■□□□□ 0.47
HDAC6-214ENST00000465269 ALADP13716 330 aa17.98■□□□□ 0.47
HDAC6-214ENST00000465269 DEFB103AP81534 67 aa17.98■□□□□ 0.47
HDAC6-214ENST00000465269 DHX30Q7L2E3 1194 aaKnown RBP eCLIP17.98■□□□□ 0.47
HDAC6-214ENST00000465269 IL1RAPL2Q9NP60 686 aa17.98■□□□□ 0.47
HDAC6-214ENST00000465269 A1CFQ9NQ94 594 aaKnown RBP17.98■□□□□ 0.47
HDAC6-214ENST00000465269 EXOC6BQ9Y2D4 811 aa17.98■□□□□ 0.47
HDAC6-214ENST00000465269 ZNF536O15090 1300 aa17.98■□□□□ 0.47
HDAC6-214ENST00000465269 DCXO43602 365 aa17.97■□□□□ 0.47
HDAC6-214ENST00000465269 MYL3P08590 195 aa17.97■□□□□ 0.47
HDAC6-214ENST00000465269 IQCF3P0C7M6 154 aa17.97■□□□□ 0.47
HDAC6-214ENST00000465269 TCTN1Q2MV58 587 aa17.97■□□□□ 0.47
HDAC6-214ENST00000465269 CHST13Q8NET6 341 aa17.97■□□□□ 0.47
HDAC6-214ENST00000465269 GREB1LQ9C091 1923 aaPredicted RBP17.96■□□□□ 0.47
HDAC6-214ENST00000465269 GRXCR2A6NFK2 248 aa17.96■□□□□ 0.47
HDAC6-214ENST00000465269 CT47B1P0C2W7 299 aaPredicted RBP17.96■□□□□ 0.47
HDAC6-214ENST00000465269 SNAP25P60880 206 aa17.96■□□□□ 0.47
HDAC6-214ENST00000465269 FAM117BQ6P1L5 589 aa17.96■□□□□ 0.47
HDAC6-214ENST00000465269 CTR9Q6PD62 1173 aa17.96■□□□□ 0.47
HDAC6-214ENST00000465269 ATP8A2Q9NTI2 1148 aa17.96■□□□□ 0.47
HDAC6-214ENST00000465269 RNF146Q9NTX7 359 aa17.96■□□□□ 0.47
HDAC6-214ENST00000465269 CLIP2Q9UDT6 1046 aa17.96■□□□□ 0.47
HDAC6-214ENST00000465269 FBXO40Q9UH90 709 aa17.96■□□□□ 0.47
HDAC6-214ENST00000465269 TANC1Q9C0D5 1861 aa17.96■□□□□ 0.47
HDAC6-214ENST00000465269 WDR87Q6ZQQ6 2873 aa17.95■□□□□ 0.46
HDAC6-214ENST00000465269 POTEB3A0JP26 581 aa17.95■□□□□ 0.46
HDAC6-214ENST00000465269 SUPT20HL2P0C7V6 817 aa17.95■□□□□ 0.46
HDAC6-214ENST00000465269 RASA1P20936 1047 aa17.95■□□□□ 0.46
HDAC6-214ENST00000465269 WDR5P61964 334 aaKnown RBP17.95■□□□□ 0.46
HDAC6-214ENST00000465269 PURAQ00577 322 aaKnown RBP17.95■□□□□ 0.46
HDAC6-214ENST00000465269 TTF1Q15361 905 aaPredicted RBP17.95■□□□□ 0.46
HDAC6-214ENST00000465269 NBPF20Q3BBV1 942 aa17.95■□□□□ 0.46
HDAC6-214ENST00000465269 TMED8Q6PL24 325 aaPredicted RBP17.95■□□□□ 0.46
HDAC6-214ENST00000465269 POTEBQ6S5H4 581 aa17.95■□□□□ 0.46
HDAC6-214ENST00000465269 KIAA1211Q6ZU35 1233 aa17.95■□□□□ 0.46
HDAC6-214ENST00000465269 LRRC47Q8N1G4 583 aaKnown RBP17.95■□□□□ 0.46
HDAC6-214ENST00000465269 ZBED2Q9BTP6 218 aa17.95■□□□□ 0.46
HDAC6-214ENST00000465269 ACAD9Q9H845 621 aa17.95■□□□□ 0.46
HDAC6-214ENST00000465269 COG6Q9Y2V7 657 aa17.95■□□□□ 0.46
HDAC6-214ENST00000465269 CHMP4BP1P59074 171 aa17.94■□□□□ 0.46
HDAC6-214ENST00000465269 GPNMBQ14956 572 aa17.94■□□□□ 0.46
HDAC6-214ENST00000465269 ISY1Q9ULR0 285 aaKnown RBP17.94■□□□□ 0.46
HDAC6-214ENST00000465269 MYO15AQ9UKN7 3530 aa17.94■□□□□ 0.46
HDAC6-214ENST00000465269 MYO7AQ13402 2215 aa17.94■□□□□ 0.46
HDAC6-214ENST00000465269 TRIP12Q14669 1992 aaPredicted RBP17.93■□□□□ 0.46
HDAC6-214ENST00000465269 LINC01553A4QN01 128 aa17.93■□□□□ 0.46
HDAC6-214ENST00000465269 ASB14A6NK59 587 aa17.93■□□□□ 0.46
HDAC6-214ENST00000465269 RFC2P35250 354 aa17.93■□□□□ 0.46
HDAC6-214ENST00000465269 KCNJ6P48051 423 aa17.93■□□□□ 0.46
HDAC6-214ENST00000465269 MUM1L1Q5H9M0 696 aa17.93■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms