RNA–Protein interactions for RNA: ENST00000465132.1

CPSF4-209, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 2

Gene CPSF4, Length 927 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-209ENST00000465132 BADQ92934 168 aa20.34■□□□□ 0.85
CPSF4-209ENST00000465132 TRIM43Q96BQ3 446 aaPredicted RBP20.34■□□□□ 0.85
CPSF4-209ENST00000465132 TBC1D32Q96NH3 1257 aa20.34■□□□□ 0.85
CPSF4-209ENST00000465132 GUCD1Q96NT3 240 aa20.34■□□□□ 0.85
CPSF4-209ENST00000465132 CNPY2Q9Y2B0 182 aa20.34■□□□□ 0.85
CPSF4-209ENST00000465132 CCDC69A6NI79 296 aa20.33■□□□□ 0.85
CPSF4-209ENST00000465132 CALM1P0DP23 149 aa20.33■□□□□ 0.85
CPSF4-209ENST00000465132 CALM2P0DP24 149 aa20.33■□□□□ 0.85
CPSF4-209ENST00000465132 CALM3P0DP25 149 aa20.33■□□□□ 0.85
CPSF4-209ENST00000465132 AKR1A1P14550 325 aa20.33■□□□□ 0.85
CPSF4-209ENST00000465132 NOVP48745 357 aa20.33■□□□□ 0.85
CPSF4-209ENST00000465132 TLE2Q04725 743 aa20.33■□□□□ 0.85
CPSF4-209ENST00000465132 RABEP1Q15276 862 aa20.33■□□□□ 0.85
CPSF4-209ENST00000465132 ADCK5Q3MIX3 580 aa20.33■□□□□ 0.85
CPSF4-209ENST00000465132 C9orf50Q5SZB4 431 aa20.33■□□□□ 0.85
CPSF4-209ENST00000465132 NFXL1Q6ZNB6 911 aa20.33■□□□□ 0.85
CPSF4-209ENST00000465132 FBXL16Q8N461 479 aa20.33■□□□□ 0.85
CPSF4-209ENST00000465132 MSL3Q8N5Y2 521 aaKnown RBP20.33■□□□□ 0.85
CPSF4-209ENST00000465132 PRPF38AQ8NAV1 312 aaKnown RBP20.33■□□□□ 0.85
CPSF4-209ENST00000465132 IL17RBQ9NRM6 502 aa20.33■□□□□ 0.85
CPSF4-209ENST00000465132 RIPK3Q9Y572 518 aa20.33■□□□□ 0.85
CPSF4-209ENST00000465132 TACC3Q9Y6A5 838 aa20.33■□□□□ 0.85
CPSF4-209ENST00000465132 EXOSC10Q01780 885 aaKnown RBP20.32■□□□□ 0.84
CPSF4-209ENST00000465132 CYB5R4Q7L1T6 521 aa20.32■□□□□ 0.84
CPSF4-209ENST00000465132 CATIPQ7Z7H3 387 aa20.32■□□□□ 0.84
CPSF4-209ENST00000465132 GMCL1P1Q8NEA9 526 aa20.32■□□□□ 0.84
CPSF4-209ENST00000465132 LENG1Q96BZ8 264 aaPredicted RBP20.32■□□□□ 0.84
CPSF4-209ENST00000465132 CHMP4CQ96CF2 233 aa20.32■□□□□ 0.84
CPSF4-209ENST00000465132 TAF6LQ9Y6J9 622 aa20.32■□□□□ 0.84
CPSF4-209ENST00000465132 SYNGAP1Q96PV0 1343 aa20.31■□□□□ 0.84
CPSF4-209ENST00000465132 DNAJC25-GNG10A0A024R161 153 aa20.31■□□□□ 0.84
CPSF4-209ENST00000465132 A0A1W2PQ45 241 aaPredicted RBP20.31■□□□□ 0.84
CPSF4-209ENST00000465132 A0A1W2PQY0 241 aa20.31■□□□□ 0.84
CPSF4-209ENST00000465132 ATP2A1O14983 1001 aa20.31■□□□□ 0.84
CPSF4-209ENST00000465132 ADAMTS4O75173 837 aa20.31■□□□□ 0.84
CPSF4-209ENST00000465132 RCSD1Q6JBY9 416 aa20.31■□□□□ 0.84
CPSF4-209ENST00000465132 ENAHQ8N8S7 591 aaPredicted RBP20.31■□□□□ 0.84
CPSF4-209ENST00000465132 DDX11Q96FC9 970 aa20.31■□□□□ 0.84
CPSF4-209ENST00000465132 FAM161BQ96MY7 647 aa20.31■□□□□ 0.84
CPSF4-209ENST00000465132 ZKSCAN3Q9BRR0 538 aa20.31■□□□□ 0.84
CPSF4-209ENST00000465132 ALDH8A1Q9H2A2 487 aaPredicted RBP20.31■□□□□ 0.84
CPSF4-209ENST00000465132 PDRG1Q9NUG6 133 aa20.31■□□□□ 0.84
CPSF4-209ENST00000465132 ST18O60284 1047 aa20.3■□□□□ 0.84
CPSF4-209ENST00000465132 ZBED4O75132 1171 aa20.3■□□□□ 0.84
CPSF4-209ENST00000465132 SNAI1O95863 264 aaPredicted RBP20.3■□□□□ 0.84
CPSF4-209ENST00000465132 CLTBP09497 229 aa20.3■□□□□ 0.84
CPSF4-209ENST00000465132 PPP2R5BQ15173 497 aa20.3■□□□□ 0.84
CPSF4-209ENST00000465132 ZNF697Q5TEC3 545 aa20.3■□□□□ 0.84
CPSF4-209ENST00000465132 MAMDC4Q6UXC1 1216 aa20.3■□□□□ 0.84
CPSF4-209ENST00000465132 CPXCR1Q8N123 301 aa20.3■□□□□ 0.84
CPSF4-209ENST00000465132 IGDCC4Q8TDY8 1250 aa20.3■□□□□ 0.84
CPSF4-209ENST00000465132 TMEM47Q9BQJ4 181 aa20.3■□□□□ 0.84
CPSF4-209ENST00000465132 TSEN34Q9BSV6 310 aaKnown RBP20.3■□□□□ 0.84
CPSF4-209ENST00000465132 SLC38A10Q9HBR0 1119 aa20.3■□□□□ 0.84
CPSF4-209ENST00000465132 SMCHD1A6NHR9 2005 aa20.3■□□□□ 0.84
CPSF4-209ENST00000465132 PLXNA1Q9UIW2 1896 aa20.3■□□□□ 0.84
CPSF4-209ENST00000465132 SH2B2O14492 632 aaPredicted RBP20.29■□□□□ 0.84
CPSF4-209ENST00000465132 NMT2O60551 498 aa20.29■□□□□ 0.84
CPSF4-209ENST00000465132 ITGB8P26012 769 aa20.29■□□□□ 0.84
CPSF4-209ENST00000465132 SLC4A3P48751 1232 aa20.29■□□□□ 0.84
CPSF4-209ENST00000465132 NEK4P51957 841 aa20.29■□□□□ 0.84
CPSF4-209ENST00000465132 SEC23AQ15436 765 aa20.29■□□□□ 0.84
CPSF4-209ENST00000465132 DHX30Q7L2E3 1194 aaKnown RBP eCLIP20.29■□□□□ 0.84
CPSF4-209ENST00000465132 PNMA1Q8ND90 353 aa20.29■□□□□ 0.84
CPSF4-209ENST00000465132 DCAF4Q8WV16 495 aa20.29■□□□□ 0.84
CPSF4-209ENST00000465132 KIFC2Q96AC6 838 aa20.29■□□□□ 0.84
CPSF4-209ENST00000465132 FEM1BQ9UK73 627 aa20.29■□□□□ 0.84
CPSF4-209ENST00000465132 FAM184BQ9ULE4 1060 aa20.29■□□□□ 0.84
CPSF4-209ENST00000465132 CTDP1Q9Y5B0 961 aaPredicted RBP20.29■□□□□ 0.84
CPSF4-209ENST00000465132 SLC12A7Q9Y666 1083 aa20.29■□□□□ 0.84
CPSF4-209ENST00000465132 SYNRGQ9UMZ2 1314 aa20.28■□□□□ 0.84
CPSF4-209ENST00000465132 KIAA0355O15063 1070 aa20.28■□□□□ 0.84
CPSF4-209ENST00000465132 PQBP1O60828 265 aaKnown RBP20.28■□□□□ 0.84
CPSF4-209ENST00000465132 KIF5BP33176 963 aa20.28■□□□□ 0.84
CPSF4-209ENST00000465132 SLC1A4P43007 532 aa20.28■□□□□ 0.84
CPSF4-209ENST00000465132 ACLYP53396 1101 aa20.28■□□□□ 0.84
CPSF4-209ENST00000465132 RCAN1P53805 252 aa20.28■□□□□ 0.84
CPSF4-209ENST00000465132 ANTXR2P58335 489 aa20.28■□□□□ 0.84
CPSF4-209ENST00000465132 GPATCH4Q5T3I0 446 aaKnown RBP20.28■□□□□ 0.84
CPSF4-209ENST00000465132 CHST3Q7LGC8 479 aa20.28■□□□□ 0.84
CPSF4-209ENST00000465132 ZNF467Q7Z7K2 595 aaPredicted RBP20.28■□□□□ 0.84
CPSF4-209ENST00000465132 SGMS1Q86VZ5 419 aa20.28■□□□□ 0.84
CPSF4-209ENST00000465132 LRRC47Q8N1G4 583 aaKnown RBP20.28■□□□□ 0.84
CPSF4-209ENST00000465132 GMCL1Q96IK5 515 aa20.28■□□□□ 0.84
CPSF4-209ENST00000465132 MAP3K14Q99558 947 aa20.28■□□□□ 0.84
CPSF4-209ENST00000465132 RAVER2Q9HCJ3 691 aaKnown RBP20.28■□□□□ 0.84
CPSF4-209ENST00000465132 ZHX1Q9UKY1 873 aaPredicted RBP20.28■□□□□ 0.84
CPSF4-209ENST00000465132 DDAH1O94760 285 aa20.27■□□□□ 0.84
CPSF4-209ENST00000465132 MCM2P49736 904 aa20.27■□□□□ 0.84
CPSF4-209ENST00000465132 OAZ1P54368 228 aa20.27■□□□□ 0.84
CPSF4-209ENST00000465132 SLFN13Q68D06 897 aa20.27■□□□□ 0.84
CPSF4-209ENST00000465132 Q6ZUG5 572 aa20.27■□□□□ 0.84
CPSF4-209ENST00000465132 KLHDC9Q8NEP7 349 aa20.27■□□□□ 0.84
CPSF4-209ENST00000465132 UPF3BQ9BZI7 483 aaKnown RBP20.27■□□□□ 0.84
CPSF4-209ENST00000465132 LY9Q9HBG7 655 aa20.27■□□□□ 0.84
CPSF4-209ENST00000465132 FBXO40Q9UH90 709 aa20.27■□□□□ 0.84
CPSF4-209ENST00000465132 CCDC196A0A1B0GTZ2 297 aa20.26■□□□□ 0.83
CPSF4-209ENST00000465132 DUSP11O75319 330 aaKnown RBP20.26■□□□□ 0.83
CPSF4-209ENST00000465132 SMAD3P84022 425 aaKnown RBP20.26■□□□□ 0.83
CPSF4-209ENST00000465132 CCSAPQ6IQ19 270 aaPredicted RBP20.26■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms