RNA–Protein interactions for RNA: ENST00000464867.1

APP-213, Transcript of amyloid beta precursor protein, humanhuman

TSL 1 (best)

Gene APP, Length 816 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APP-213ENST00000464867 CCDC27Q2M243 656 aa11.53□□□□□ -0.56
APP-213ENST00000464867 METTL16Q86W50 562 aaKnown RBP11.53□□□□□ -0.56
APP-213ENST00000464867 MAPKAPK5Q8IW41 473 aa11.53□□□□□ -0.56
APP-213ENST00000464867 WWC1Q8IX03 1113 aa11.53□□□□□ -0.56
APP-213ENST00000464867 FAM126BQ8IXS8 530 aa11.53□□□□□ -0.56
APP-213ENST00000464867 KLHDC9Q8NEP7 349 aa11.53□□□□□ -0.56
APP-213ENST00000464867 TANGO6Q9C0B7 1094 aa11.53□□□□□ -0.56
APP-213ENST00000464867 DNAJC18Q9H819 358 aa11.53□□□□□ -0.56
APP-213ENST00000464867 CABP5Q9NP86 173 aa11.53□□□□□ -0.56
APP-213ENST00000464867 PALD1Q9ULE6 856 aa11.53□□□□□ -0.56
APP-213ENST00000464867 SIPA1L1O43166 1804 aa11.53□□□□□ -0.56
APP-213ENST00000464867 CFAP54Q96N23 3096 aa11.53□□□□□ -0.56
APP-213ENST00000464867 ASGR1P07306 291 aa11.52□□□□□ -0.57
APP-213ENST00000464867 IL15P40933 162 aaPredicted RBP11.52□□□□□ -0.57
APP-213ENST00000464867 GUCA2AQ02747 115 aa11.52□□□□□ -0.57
APP-213ENST00000464867 KCTD2Q14681 263 aa11.52□□□□□ -0.57
APP-213ENST00000464867 KRI1Q8N9T8 703 aaKnown RBP11.52□□□□□ -0.57
APP-213ENST00000464867 TGFBRAP1Q8WUH2 860 aa11.52□□□□□ -0.57
APP-213ENST00000464867 LENG1Q96BZ8 264 aaPredicted RBP11.52□□□□□ -0.57
APP-213ENST00000464867 MMP19Q99542 508 aa11.52□□□□□ -0.57
APP-213ENST00000464867 PRRX2Q99811 253 aa11.52□□□□□ -0.57
APP-213ENST00000464867 PKD2L1Q9P0L9 805 aa11.52□□□□□ -0.57
APP-213ENST00000464867 LRP2BPQ9P2M1 347 aa11.52□□□□□ -0.57
APP-213ENST00000464867 DIS3Q9Y2L1 958 aaKnown RBP11.52□□□□□ -0.57
APP-213ENST00000464867 ZNF536O15090 1300 aa11.52□□□□□ -0.57
APP-213ENST00000464867 FANCIQ9NVI1 1328 aa11.52□□□□□ -0.57
APP-213ENST00000464867 ZFHX2Q9C0A1 2572 aaPredicted RBP11.52□□□□□ -0.57
APP-213ENST00000464867 USP34Q70CQ2 3546 aa11.52□□□□□ -0.57
APP-213ENST00000464867 DUSP11O75319 330 aaKnown RBP11.51□□□□□ -0.57
APP-213ENST00000464867 SLC25A27O95847 323 aa11.51□□□□□ -0.57
APP-213ENST00000464867 ZNF865P0CJ78 1059 aaPredicted RBP11.51□□□□□ -0.57
APP-213ENST00000464867 TAL1P17542 331 aaPredicted RBP11.51□□□□□ -0.57
APP-213ENST00000464867 ADORA1P30542 326 aa11.51□□□□□ -0.57
APP-213ENST00000464867 RFX5P48382 616 aaPredicted RBP11.51□□□□□ -0.57
APP-213ENST00000464867 CCL23P55773 120 aa11.51□□□□□ -0.57
APP-213ENST00000464867 USP46P62068 366 aa11.51□□□□□ -0.57
APP-213ENST00000464867 EXOSC9Q06265 439 aaKnown RBP11.51□□□□□ -0.57
APP-213ENST00000464867 MVPQ14764 893 aaKnown RBP11.51□□□□□ -0.57
APP-213ENST00000464867 ABCB5Q2M3G0 1257 aa11.51□□□□□ -0.57
APP-213ENST00000464867 LEXMQ3ZCV2 418 aa11.51□□□□□ -0.57
APP-213ENST00000464867 GNASQ5JWF2 1037 aa11.51□□□□□ -0.57
APP-213ENST00000464867 ZNF384Q8TF68 577 aa11.51□□□□□ -0.57
APP-213ENST00000464867 UPF3BQ9BZI7 483 aaKnown RBP11.51□□□□□ -0.57
APP-213ENST00000464867 UBE2ZQ9H832 354 aaPredicted RBP11.51□□□□□ -0.57
APP-213ENST00000464867 AATFQ9NY61 560 aaKnown RBP eCLIP11.51□□□□□ -0.57
APP-213ENST00000464867 LMCD1Q9NZU5 365 aa11.51□□□□□ -0.57
APP-213ENST00000464867 PGK2P07205 417 aa11.5□□□□□ -0.57
APP-213ENST00000464867 PFKMP08237 780 aa11.5□□□□□ -0.57
APP-213ENST00000464867 ACTN1P12814 892 aa11.5□□□□□ -0.57
APP-213ENST00000464867 CST5P28325 142 aaPredicted RBP11.5□□□□□ -0.57
APP-213ENST00000464867 RPIAP49247 311 aa11.5□□□□□ -0.57
APP-213ENST00000464867 GRB10Q13322 594 aa11.5□□□□□ -0.57
APP-213ENST00000464867 CERKLQ49MI3 558 aaPredicted RBP11.5□□□□□ -0.57
APP-213ENST00000464867 GORABQ5T7V8 394 aa11.5□□□□□ -0.57
APP-213ENST00000464867 CCSAPQ6IQ19 270 aaPredicted RBP11.5□□□□□ -0.57
APP-213ENST00000464867 PTCRAQ6ISU1 281 aaPredicted RBP11.5□□□□□ -0.57
APP-213ENST00000464867 SPATA5Q8NB90 893 aa11.5□□□□□ -0.57
APP-213ENST00000464867 ACER1Q8TDN7 264 aa11.5□□□□□ -0.57
APP-213ENST00000464867 SLC9A7Q96T83 725 aa11.5□□□□□ -0.57
APP-213ENST00000464867 SAP30BPQ9UHR5 308 aaKnown RBP11.5□□□□□ -0.57
APP-213ENST00000464867 FAM50BQ9Y247 325 aa11.5□□□□□ -0.57
APP-213ENST00000464867 AKAP2Q9Y2D5 859 aa11.5□□□□□ -0.57
APP-213ENST00000464867 PTPRZ1P23471 2315 aaPredicted RBP11.5□□□□□ -0.57
APP-213ENST00000464867 FLT1P17948 1338 aa11.5□□□□□ -0.57
APP-213ENST00000464867 EPOPA6NHQ4 379 aa11.49□□□□□ -0.57
APP-213ENST00000464867 CD4P01730 458 aa11.49□□□□□ -0.57
APP-213ENST00000464867 KCNA5P22460 613 aa11.49□□□□□ -0.57
APP-213ENST00000464867 MMP16P51512 607 aa11.49□□□□□ -0.57
APP-213ENST00000464867 TIMM10P62072 90 aa11.49□□□□□ -0.57
APP-213ENST00000464867 TBC1D9Q6ZT07 1266 aa11.49□□□□□ -0.57
APP-213ENST00000464867 HFE2Q6ZVN8 426 aa11.49□□□□□ -0.57
APP-213ENST00000464867 MSL3Q8N5Y2 521 aaKnown RBP11.49□□□□□ -0.57
APP-213ENST00000464867 PHOSPHO2Q8TCD6 241 aa11.49□□□□□ -0.57
APP-213ENST00000464867 USB1Q9BQ65 265 aaKnown RBP11.49□□□□□ -0.57
APP-213ENST00000464867 SEZ6LQ9BYH1 1024 aa11.49□□□□□ -0.57
APP-213ENST00000464867 ZHX1Q9UKY1 873 aaPredicted RBP11.49□□□□□ -0.57
APP-213ENST00000464867 FLOT1O75955 427 aa11.48□□□□□ -0.57
APP-213ENST00000464867 IL9P15248 144 aa11.48□□□□□ -0.57
APP-213ENST00000464867 TAP1Q03518 808 aa11.48□□□□□ -0.57
APP-213ENST00000464867 FOXC1Q12948 553 aa11.48□□□□□ -0.57
APP-213ENST00000464867 PKN1Q16512 942 aa11.48□□□□□ -0.57
APP-213ENST00000464867 ZNF792Q3KQV3 632 aa11.48□□□□□ -0.57
APP-213ENST00000464867 NAA16Q6N069 864 aaPredicted RBP11.48□□□□□ -0.57
APP-213ENST00000464867 TATDN1Q6P1N9 297 aa11.48□□□□□ -0.57
APP-213ENST00000464867 ERMP1Q7Z2K6 904 aa11.48□□□□□ -0.57
APP-213ENST00000464867 XAGE2Q96GT9 111 aa11.48□□□□□ -0.57
APP-213ENST00000464867 HMG20BQ9P0W2 317 aa11.48□□□□□ -0.57
APP-213ENST00000464867 SERPINB13Q9UIV8 391 aa11.48□□□□□ -0.57
APP-213ENST00000464867 FOCADQ5VW36 1801 aa11.48□□□□□ -0.57
APP-213ENST00000464867 MYH1P12882 1939 aa11.47□□□□□ -0.57
APP-213ENST00000464867 UMODL1Q5DID0 1318 aa11.47□□□□□ -0.57
APP-213ENST00000464867 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP11.47□□□□□ -0.57
APP-213ENST00000464867 MYADML2A6NDP7 307 aa11.47□□□□□ -0.57
APP-213ENST00000464867 CABYRO75952 493 aa11.47□□□□□ -0.57
APP-213ENST00000464867 COPB2P35606 906 aa11.47□□□□□ -0.57
APP-213ENST00000464867 GADD45GIP1Q8TAE8 222 aaPredicted RBP11.47□□□□□ -0.57
APP-213ENST00000464867 NEUROD6Q96NK8 337 aa11.47□□□□□ -0.57
APP-213ENST00000464867 NOC4LQ9BVI4 516 aaKnown RBP11.47□□□□□ -0.57
APP-213ENST00000464867 USP44Q9H0E7 712 aa11.47□□□□□ -0.57
APP-213ENST00000464867 IRF2BPLQ9H1B7 796 aa11.47□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms