RNA–Protein interactions for RNA: ENST00000464800.5

MCF2L-220, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 2

Gene MCF2L, Length 720 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-220ENST00000464800 SEZ6LQ9BYH1 1024 aa17.39■□□□□ 0.37
MCF2L-220ENST00000464800 AP5M1Q9H0R1 490 aa17.39■□□□□ 0.37
MCF2L-220ENST00000464800 NKX2-4Q9H2Z4 354 aa17.39■□□□□ 0.37
MCF2L-220ENST00000464800 SLC28A3Q9HAS3 691 aa17.39■□□□□ 0.37
MCF2L-220ENST00000464800 GNEQ9Y223 722 aaKnown RBP17.39■□□□□ 0.37
MCF2L-220ENST00000464800 UMODL1Q5DID0 1318 aa17.39■□□□□ 0.37
MCF2L-220ENST00000464800 ZEB2O60315 1214 aa17.38■□□□□ 0.37
MCF2L-220ENST00000464800 MRPS5P82675 430 aaKnown RBP17.38■□□□□ 0.37
MCF2L-220ENST00000464800 ITGA7Q13683 1181 aa17.38■□□□□ 0.37
MCF2L-220ENST00000464800 ADGRE1Q14246 886 aa17.38■□□□□ 0.37
MCF2L-220ENST00000464800 TKFCQ3LXA3 575 aa17.38■□□□□ 0.37
MCF2L-220ENST00000464800 FAM160B2Q86V87 743 aa17.38■□□□□ 0.37
MCF2L-220ENST00000464800 CHURC1Q8WUH1 139 aa17.38■□□□□ 0.37
MCF2L-220ENST00000464800 YBX2Q9Y2T7 364 aaKnown RBP17.38■□□□□ 0.37
MCF2L-220ENST00000464800 CHD9Q3L8U1 2897 aa17.38■□□□□ 0.37
MCF2L-220ENST00000464800 SOWAHBA6NEL2 793 aa17.37■□□□□ 0.37
MCF2L-220ENST00000464800 M0R2C6 588 aa17.37■□□□□ 0.37
MCF2L-220ENST00000464800 PDE4BQ07343 736 aa17.37■□□□□ 0.37
MCF2L-220ENST00000464800 OTOP2Q7RTS6 562 aa17.37■□□□□ 0.37
MCF2L-220ENST00000464800 NEDD1Q8NHV4 660 aa17.37■□□□□ 0.37
MCF2L-220ENST00000464800 GMCL1Q96IK5 515 aa17.37■□□□□ 0.37
MCF2L-220ENST00000464800 AGBL1Q96MI9 1066 aa17.37■□□□□ 0.37
MCF2L-220ENST00000464800 NOC4LQ9BVI4 516 aaKnown RBP17.37■□□□□ 0.37
MCF2L-220ENST00000464800 NACAP1Q9BZK3 213 aa17.37■□□□□ 0.37
MCF2L-220ENST00000464800 ZNF536O15090 1300 aa17.37■□□□□ 0.37
MCF2L-220ENST00000464800 MUC3AQ02505 3323 aa17.37■□□□□ 0.37
MCF2L-220ENST00000464800 B4GALT4O60513 344 aa17.36■□□□□ 0.37
MCF2L-220ENST00000464800 SLC3A2P08195 630 aaKnown RBP17.36■□□□□ 0.37
MCF2L-220ENST00000464800 ALAS1P13196 640 aa17.36■□□□□ 0.37
MCF2L-220ENST00000464800 SMPD1P17405 629 aa17.36■□□□□ 0.37
MCF2L-220ENST00000464800 SLC1A4P43007 532 aa17.36■□□□□ 0.37
MCF2L-220ENST00000464800 CCL23P55773 120 aa17.36■□□□□ 0.37
MCF2L-220ENST00000464800 LRRFIP1Q32MZ4 808 aaKnown RBP17.36■□□□□ 0.37
MCF2L-220ENST00000464800 TSHZ3Q63HK5 1081 aa17.36■□□□□ 0.37
MCF2L-220ENST00000464800 IFNL3Q8IZI9 196 aa17.36■□□□□ 0.37
MCF2L-220ENST00000464800 STAG1Q8WVM7 1258 aa17.36■□□□□ 0.37
MCF2L-220ENST00000464800 TRERF1Q96PN7 1200 aa17.36■□□□□ 0.37
MCF2L-220ENST00000464800 UHRF1Q96T88 793 aaPredicted RBP17.36■□□□□ 0.37
MCF2L-220ENST00000464800 PATL2C9JE40 543 aaKnown RBP17.35■□□□□ 0.37
MCF2L-220ENST00000464800 DYNC1LI2O43237 492 aaPredicted RBP17.35■□□□□ 0.37
MCF2L-220ENST00000464800 TFAP4Q01664 338 aa17.35■□□□□ 0.37
MCF2L-220ENST00000464800 PPP4R3BQ5MIZ7 849 aa17.35■□□□□ 0.37
MCF2L-220ENST00000464800 PPP2R2DQ66LE6 453 aa17.35■□□□□ 0.37
MCF2L-220ENST00000464800 FBXO16Q8IX29 292 aaPredicted RBP17.35■□□□□ 0.37
MCF2L-220ENST00000464800 TRPV6Q9H1D0 765 aa17.35■□□□□ 0.37
MCF2L-220ENST00000464800 WNT8AQ9H1J5 351 aa17.35■□□□□ 0.37
MCF2L-220ENST00000464800 TSPYL2Q9H2G4 693 aaPredicted RBP17.35■□□□□ 0.37
MCF2L-220ENST00000464800 Q9Y3F1 56 aa17.35■□□□□ 0.37
MCF2L-220ENST00000464800 SLC4A7Q9Y6M7 1214 aa17.35■□□□□ 0.37
MCF2L-220ENST00000464800 GRIN2DO15399 1336 aa17.35■□□□□ 0.37
MCF2L-220ENST00000464800 PLA2G6O60733 806 aa17.34■□□□□ 0.37
MCF2L-220ENST00000464800 PTGS1P23219 599 aa17.34■□□□□ 0.37
MCF2L-220ENST00000464800 MCCP23508 829 aa17.34■□□□□ 0.37
MCF2L-220ENST00000464800 RABGGTBP53611 331 aa17.34■□□□□ 0.37
MCF2L-220ENST00000464800 PSMC6P62333 389 aa17.34■□□□□ 0.37
MCF2L-220ENST00000464800 IQSEC1Q6DN90 963 aa17.34■□□□□ 0.37
MCF2L-220ENST00000464800 EEPD1Q7L9B9 569 aa17.34■□□□□ 0.37
MCF2L-220ENST00000464800 RPUSD2Q8IZ73 545 aaKnown RBP17.34■□□□□ 0.37
MCF2L-220ENST00000464800 CHMP4CQ96CF2 233 aa17.34■□□□□ 0.37
MCF2L-220ENST00000464800 TANC1Q9C0D5 1861 aa17.34■□□□□ 0.37
MCF2L-220ENST00000464800 NAPBQ9H115 298 aa17.34■□□□□ 0.37
MCF2L-220ENST00000464800 PDGFCQ9NRA1 345 aa17.34■□□□□ 0.37
MCF2L-220ENST00000464800 CYP39A1Q9NYL5 469 aa17.34■□□□□ 0.37
MCF2L-220ENST00000464800 DDX49Q9Y6V7 483 aaKnown RBP17.34■□□□□ 0.37
MCF2L-220ENST00000464800 NCOR1O75376 2440 aa17.33■□□□□ 0.37
MCF2L-220ENST00000464800 ZBBXA8MT70 800 aa17.33■□□□□ 0.36
MCF2L-220ENST00000464800 PPARAQ07869 468 aa17.33■□□□□ 0.36
MCF2L-220ENST00000464800 MUM1L1Q5H9M0 696 aa17.33■□□□□ 0.36
MCF2L-220ENST00000464800 TAPT1Q6NXT6 567 aa17.33■□□□□ 0.36
MCF2L-220ENST00000464800 KCTD1Q719H9 257 aa17.33■□□□□ 0.36
MCF2L-220ENST00000464800 MICALL1Q8N3F8 863 aa17.33■□□□□ 0.36
MCF2L-220ENST00000464800 VTA1Q9NP79 307 aa17.33■□□□□ 0.36
MCF2L-220ENST00000464800 PCDHA11Q9Y5I1 949 aa17.33■□□□□ 0.36
MCF2L-220ENST00000464800 SCN5AQ14524 2016 aa17.33■□□□□ 0.36
MCF2L-220ENST00000464800 TCF20Q9UGU0 1960 aaKnown RBP17.32■□□□□ 0.36
MCF2L-220ENST00000464800 PFKMP08237 780 aa17.32■□□□□ 0.36
MCF2L-220ENST00000464800 ATP2A2P16615 1042 aaKnown RBP17.32■□□□□ 0.36
MCF2L-220ENST00000464800 SNAP25P60880 206 aa17.32■□□□□ 0.36
MCF2L-220ENST00000464800 NSMFQ6X4W1 530 aa17.32■□□□□ 0.36
MCF2L-220ENST00000464800 SCLYQ96I15 445 aa17.32■□□□□ 0.36
MCF2L-220ENST00000464800 ALDH8A1Q9H2A2 487 aaPredicted RBP17.32■□□□□ 0.36
MCF2L-220ENST00000464800 CCPG1Q9ULG6 757 aa17.32■□□□□ 0.36
MCF2L-220ENST00000464800 STX8Q9UNK0 236 aa17.32■□□□□ 0.36
MCF2L-220ENST00000464800 TSPY2A6NKD2 308 aa17.31■□□□□ 0.36
MCF2L-220ENST00000464800 MYOGP15173 224 aa17.31■□□□□ 0.36
MCF2L-220ENST00000464800 RCSD1Q6JBY9 416 aa17.31■□□□□ 0.36
MCF2L-220ENST00000464800 KIAA1211Q6ZU35 1233 aa17.31■□□□□ 0.36
MCF2L-220ENST00000464800 SEC62Q99442 399 aaKnown RBP17.31■□□□□ 0.36
MCF2L-220ENST00000464800 RCAN3Q9UKA8 241 aa17.31■□□□□ 0.36
MCF2L-220ENST00000464800 PRR12Q9ULL5 1215 aa17.31■□□□□ 0.36
MCF2L-220ENST00000464800 CHD7Q9P2D1 2997 aa17.31■□□□□ 0.36
MCF2L-220ENST00000464800 BDP1A6H8Y1 2624 aa17.3■□□□□ 0.36
MCF2L-220ENST00000464800 SUPT20HL2P0C7V6 817 aa17.3■□□□□ 0.36
MCF2L-220ENST00000464800 DUSP28Q4G0W2 176 aa17.3■□□□□ 0.36
MCF2L-220ENST00000464800 TMEM63BQ5T3F8 832 aa17.3■□□□□ 0.36
MCF2L-220ENST00000464800 RASGRP2Q7LDG7 609 aa17.3■□□□□ 0.36
MCF2L-220ENST00000464800 MORC4Q8TE76 937 aa17.3■□□□□ 0.36
MCF2L-220ENST00000464800 FSD1Q9BTV5 496 aa17.3■□□□□ 0.36
MCF2L-220ENST00000464800 TRMT13Q9NUP7 481 aaKnown RBP17.3■□□□□ 0.36
MCF2L-220ENST00000464800 POLR3EQ9NVU0 708 aa17.3■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms