RNA–Protein interactions for RNA: ENST00000464541.5

PTCD3-205, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 5

Gene PTCD3, Length 890 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-205ENST00000464541 NFE2L2Q16236 605 aa9.12□□□□□ -0.95
PTCD3-205ENST00000464541 MTERF2Q49AM1 385 aa9.12□□□□□ -0.95
PTCD3-205ENST00000464541 FYB2Q5VWT5 728 aa9.12□□□□□ -0.95
PTCD3-205ENST00000464541 BTN2A2Q8WVV5 523 aa9.12□□□□□ -0.95
PTCD3-205ENST00000464541 CRTAC1Q9NQ79 661 aa9.12□□□□□ -0.95
PTCD3-205ENST00000464541 SNTG2Q9NY99 539 aa9.12□□□□□ -0.95
PTCD3-205ENST00000464541 TAF6LQ9Y6J9 622 aa9.12□□□□□ -0.95
PTCD3-205ENST00000464541 NOTOA8MTQ0 251 aa9.11□□□□□ -0.95
PTCD3-205ENST00000464541 PPP2R2AP63151 447 aa9.11□□□□□ -0.95
PTCD3-205ENST00000464541 SCRN1Q12765 414 aa9.11□□□□□ -0.95
PTCD3-205ENST00000464541 IFRD2Q12894 506 aaPredicted RBP9.11□□□□□ -0.95
PTCD3-205ENST00000464541 FAM53CQ9NYF3 392 aa9.11□□□□□ -0.95
PTCD3-205ENST00000464541 PAMP19021 973 aa9.1□□□□□ -0.95
PTCD3-205ENST00000464541 CORO7P57737 925 aa9.1□□□□□ -0.95
PTCD3-205ENST00000464541 HSF5Q4G112 596 aaPredicted RBP9.1□□□□□ -0.95
PTCD3-205ENST00000464541 NLRX1Q86UT6 975 aa9.1□□□□□ -0.95
PTCD3-205ENST00000464541 JAMLQ86YT9 394 aa9.1□□□□□ -0.95
PTCD3-205ENST00000464541 SRPK1Q96SB4 655 aaKnown RBP9.1□□□□□ -0.95
PTCD3-205ENST00000464541 C19orf44Q9H6X5 657 aa9.1□□□□□ -0.95
PTCD3-205ENST00000464541 GPR160Q9UJ42 338 aa9.1□□□□□ -0.95
PTCD3-205ENST00000464541 CARMIL2Q6F5E8 1435 aa9.09□□□□□ -0.95
PTCD3-205ENST00000464541 CCDC85CA6NKD9 419 aa9.09□□□□□ -0.95
PTCD3-205ENST00000464541 TBX1O43435 398 aa9.09□□□□□ -0.95
PTCD3-205ENST00000464541 TRHRP34981 398 aaPredicted RBP9.09□□□□□ -0.95
PTCD3-205ENST00000464541 TIGD5Q53EQ6 642 aa9.09□□□□□ -0.95
PTCD3-205ENST00000464541 IQCEQ6IPM2 695 aa9.09□□□□□ -0.95
PTCD3-205ENST00000464541 NLGN2Q8NFZ4 835 aa9.09□□□□□ -0.95
PTCD3-205ENST00000464541 MMP19Q99542 508 aa9.09□□□□□ -0.95
PTCD3-205ENST00000464541 AARSD1Q9BTE6 412 aaKnown RBP9.09□□□□□ -0.95
PTCD3-205ENST00000464541 SPATA9Q9BWV2 254 aa9.09□□□□□ -0.95
PTCD3-205ENST00000464541 LGR4Q9BXB1 951 aa9.09□□□□□ -0.95
PTCD3-205ENST00000464541 RNF32Q9H0A6 362 aa9.09□□□□□ -0.95
PTCD3-205ENST00000464541 ACSL6Q9UKU0 697 aa9.09□□□□□ -0.95
PTCD3-205ENST00000464541 YBX2Q9Y2T7 364 aaKnown RBP9.09□□□□□ -0.95
PTCD3-205ENST00000464541 NPHP3-ACAD11A0A0J9YXS1 232 aa9.08□□□□□ -0.96
PTCD3-205ENST00000464541 PSPNO60542 156 aa9.08□□□□□ -0.96
PTCD3-205ENST00000464541 SNRPB2P08579 225 aaKnown RBP9.08□□□□□ -0.96
PTCD3-205ENST00000464541 FGFR1P11362 822 aa9.08□□□□□ -0.96
PTCD3-205ENST00000464541 L1CAMP32004 1257 aa9.08□□□□□ -0.96
PTCD3-205ENST00000464541 GFRA1P56159 465 aa9.08□□□□□ -0.96
PTCD3-205ENST00000464541 MAP4K2Q12851 820 aa9.08□□□□□ -0.96
PTCD3-205ENST00000464541 LAPTM5Q13571 262 aa9.08□□□□□ -0.96
PTCD3-205ENST00000464541 TESK1Q15569 626 aa9.08□□□□□ -0.96
PTCD3-205ENST00000464541 LONRF2Q1L5Z9 754 aa9.08□□□□□ -0.96
PTCD3-205ENST00000464541 ACBD5Q5T8D3 534 aaPredicted RBP9.08□□□□□ -0.96
PTCD3-205ENST00000464541 E4F1Q66K89 784 aaPredicted RBP9.08□□□□□ -0.96
PTCD3-205ENST00000464541 SHISA4Q96DD7 197 aa9.08□□□□□ -0.96
PTCD3-205ENST00000464541 JMJD8Q96S16 334 aa9.08□□□□□ -0.96
PTCD3-205ENST00000464541 SLC6A17Q9H1V8 727 aa9.08□□□□□ -0.96
PTCD3-205ENST00000464541 THBDP07204 575 aa9.07□□□□□ -0.96
PTCD3-205ENST00000464541 PNLIPP16233 465 aa9.07□□□□□ -0.96
PTCD3-205ENST00000464541 SSRP1Q08945 709 aaKnown RBP9.07□□□□□ -0.96
PTCD3-205ENST00000464541 SPATC1Q76KD6 591 aa9.07□□□□□ -0.96
PTCD3-205ENST00000464541 NPLOC4Q8TAT6 608 aa9.07□□□□□ -0.96
PTCD3-205ENST00000464541 KCTD13Q8WZ19 329 aa9.07□□□□□ -0.96
PTCD3-205ENST00000464541 LNPKQ9C0E8 428 aa9.07□□□□□ -0.96
PTCD3-205ENST00000464541 TRAV20A0A0B4J274 112 aa9.06□□□□□ -0.96
PTCD3-205ENST00000464541 FAM221BA6H8Z2 402 aa9.06□□□□□ -0.96
PTCD3-205ENST00000464541 PAX4O43316 350 aa9.06□□□□□ -0.96
PTCD3-205ENST00000464541 PLS3P13797 630 aa9.06□□□□□ -0.96
PTCD3-205ENST00000464541 ARL4AP40617 200 aa9.06□□□□□ -0.96
PTCD3-205ENST00000464541 CYP4F3Q08477 520 aa9.06□□□□□ -0.96
PTCD3-205ENST00000464541 ZC3H12BQ5HYM0 836 aaKnown RBP9.06□□□□□ -0.96
PTCD3-205ENST00000464541 IRF2BP1Q8IU81 584 aa9.06□□□□□ -0.96
PTCD3-205ENST00000464541 FRS2Q8WU20 508 aa9.06□□□□□ -0.96
PTCD3-205ENST00000464541 ARHGEF4Q9NR80 690 aa9.06□□□□□ -0.96
PTCD3-205ENST00000464541 A0A1W2PQ27 194 aa9.05□□□□□ -0.96
PTCD3-205ENST00000464541 A0A1W2PQ64 194 aa9.05□□□□□ -0.96
PTCD3-205ENST00000464541 A0A1W2PQC6 194 aa9.05□□□□□ -0.96
PTCD3-205ENST00000464541 A0A1W2PQD8 194 aa9.05□□□□□ -0.96
PTCD3-205ENST00000464541 ZNF503-AS2A6NEH8 195 aa9.05□□□□□ -0.96
PTCD3-205ENST00000464541 KCNJ6P48051 423 aa9.05□□□□□ -0.96
PTCD3-205ENST00000464541 KCNAB2Q13303 367 aa9.05□□□□□ -0.96
PTCD3-205ENST00000464541 INTS4Q96HW7 963 aaKnown RBP9.05□□□□□ -0.96
PTCD3-205ENST00000464541 PLCD4Q9BRC7 762 aa9.05□□□□□ -0.96
PTCD3-205ENST00000464541 GPRC5CQ9NQ84 441 aa9.05□□□□□ -0.96
PTCD3-205ENST00000464541 CLEC1BQ9P126 229 aa9.05□□□□□ -0.96
PTCD3-205ENST00000464541 IMPACTQ9P2X3 320 aa9.05□□□□□ -0.96
PTCD3-205ENST00000464541 CDK11AQ9UQ88 783 aaPredicted RBP9.05□□□□□ -0.96
PTCD3-205ENST00000464541 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP9.05□□□□□ -0.96
PTCD3-205ENST00000464541 IQCJ-SCHIP1C9J366 451 aaPredicted RBP9.04□□□□□ -0.96
PTCD3-205ENST00000464541 PRKCAP17252 672 aa9.04□□□□□ -0.96
PTCD3-205ENST00000464541 ECI1P42126 302 aa9.04□□□□□ -0.96
PTCD3-205ENST00000464541 SLC35F1Q5T1Q4 408 aa9.04□□□□□ -0.96
PTCD3-205ENST00000464541 MPZL3Q6UWV2 235 aa9.04□□□□□ -0.96
PTCD3-205ENST00000464541 ZBTB38Q8NAP3 1195 aaPredicted RBP9.04□□□□□ -0.96
PTCD3-205ENST00000464541 TMEM145Q8NBT3 493 aa9.04□□□□□ -0.96
PTCD3-205ENST00000464541 KREMEN2Q8NCW0 462 aa9.04□□□□□ -0.96
PTCD3-205ENST00000464541 NUP43Q8NFH3 380 aa9.04□□□□□ -0.96
PTCD3-205ENST00000464541 C1orf159Q96HA4 380 aa9.04□□□□□ -0.96
PTCD3-205ENST00000464541 MRFAP1L1Q96HT8 127 aa9.04□□□□□ -0.96
PTCD3-205ENST00000464541 IER2Q9BTL4 223 aa9.04□□□□□ -0.96
PTCD3-205ENST00000464541 ZSWIM4Q9H7M6 989 aa9.04□□□□□ -0.96
PTCD3-205ENST00000464541 MEFVO15553 781 aaPredicted RBP9.03□□□□□ -0.96
PTCD3-205ENST00000464541 ADCY3O60266 1144 aa9.03□□□□□ -0.96
PTCD3-205ENST00000464541 NPHS1O60500 1241 aa9.03□□□□□ -0.96
PTCD3-205ENST00000464541 EFEMP2O95967 443 aa9.03□□□□□ -0.96
PTCD3-205ENST00000464541 GRIA2P42262 883 aa9.03□□□□□ -0.96
PTCD3-205ENST00000464541 CCDC144BQ3MJ40 725 aa9.03□□□□□ -0.96
PTCD3-205ENST00000464541 JMYQ8N9B5 988 aa9.03□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms