RNA–Protein interactions for RNA: ENST00000464480.1

HMGXB4-205, Transcript of HMG-box containing 4, humanhuman

TSL 2

Gene HMGXB4, Length 559 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB4-205ENST00000464480 RFPL3O75679 317 aa5.29□□□□□ -1.56
HMGXB4-205ENST00000464480 THBDP07204 575 aa5.29□□□□□ -1.56
HMGXB4-205ENST00000464480 KCNAB2Q13303 367 aa5.29□□□□□ -1.56
HMGXB4-205ENST00000464480 IKZF1Q13422 519 aa5.29□□□□□ -1.56
HMGXB4-205ENST00000464480 SF1Q15637 639 aaKnown RBP5.29□□□□□ -1.56
HMGXB4-205ENST00000464480 PRSS53Q2L4Q9 553 aa5.29□□□□□ -1.56
HMGXB4-205ENST00000464480 FNDC3BQ53EP0 1204 aaKnown RBP5.29□□□□□ -1.56
HMGXB4-205ENST00000464480 RTP2Q5QGT7 225 aa5.29□□□□□ -1.56
HMGXB4-205ENST00000464480 ARTNQ5T4W7 220 aa5.29□□□□□ -1.56
HMGXB4-205ENST00000464480 ACBD5Q5T8D3 534 aaPredicted RBP5.29□□□□□ -1.56
HMGXB4-205ENST00000464480 E4F1Q66K89 784 aaPredicted RBP5.29□□□□□ -1.56
HMGXB4-205ENST00000464480 CYP2R1Q6VVX0 501 aa5.29□□□□□ -1.56
HMGXB4-205ENST00000464480 MAMDC2Q7Z304 686 aaPredicted RBP5.29□□□□□ -1.56
HMGXB4-205ENST00000464480 PPIL6Q8IXY8 311 aa5.29□□□□□ -1.56
HMGXB4-205ENST00000464480 C1orf159Q96HA4 380 aa5.29□□□□□ -1.56
HMGXB4-205ENST00000464480 AP5S1Q9NUS5 200 aa5.29□□□□□ -1.56
HMGXB4-205ENST00000464480 SLC5A6Q9Y289 635 aa5.29□□□□□ -1.56
HMGXB4-205ENST00000464480 EFCAB14O75071 495 aa5.28□□□□□ -1.56
HMGXB4-205ENST00000464480 ESR1P03372 595 aa5.28□□□□□ -1.56
HMGXB4-205ENST00000464480 PAMP19021 973 aa5.28□□□□□ -1.56
HMGXB4-205ENST00000464480 RPL10P27635 214 aaKnown RBP5.28□□□□□ -1.56
HMGXB4-205ENST00000464480 GYS2P54840 703 aa5.28□□□□□ -1.56
HMGXB4-205ENST00000464480 RBM10P98175 930 aaKnown RBP5.28□□□□□ -1.56
HMGXB4-205ENST00000464480 TEKQ02763 1124 aa5.28□□□□□ -1.56
HMGXB4-205ENST00000464480 PABPC4Q13310 644 aaKnown RBP eCLIP5.28□□□□□ -1.56
HMGXB4-205ENST00000464480 TRIM61Q5EBN2 209 aa5.28□□□□□ -1.56
HMGXB4-205ENST00000464480 SLC35F1Q5T1Q4 408 aa5.28□□□□□ -1.56
HMGXB4-205ENST00000464480 ANGEL2Q5VTE6 544 aaKnown RBP5.28□□□□□ -1.56
HMGXB4-205ENST00000464480 USP53Q70EK8 1073 aa5.28□□□□□ -1.56
HMGXB4-205ENST00000464480 WAPLQ7Z5K2 1190 aa5.28□□□□□ -1.56
HMGXB4-205ENST00000464480 VSIG10LQ86VR7 867 aa5.28□□□□□ -1.56
HMGXB4-205ENST00000464480 NIM1KQ8IY84 436 aa5.28□□□□□ -1.56
HMGXB4-205ENST00000464480 NPLOC4Q8TAT6 608 aa5.28□□□□□ -1.56
HMGXB4-205ENST00000464480 DCAF4Q8WV16 495 aa5.28□□□□□ -1.56
HMGXB4-205ENST00000464480 PTPRN2Q92932 1015 aa5.28□□□□□ -1.56
HMGXB4-205ENST00000464480 NINJ1Q92982 152 aa5.28□□□□□ -1.56
HMGXB4-205ENST00000464480 MFSD3Q96ES6 412 aa5.28□□□□□ -1.56
HMGXB4-205ENST00000464480 FCRL2Q96LA5 508 aaPredicted RBP5.28□□□□□ -1.56
HMGXB4-205ENST00000464480 NDOR1Q9UHB4 597 aa5.28□□□□□ -1.56
HMGXB4-205ENST00000464480 AQP7O14520 342 aa5.27□□□□□ -1.57
HMGXB4-205ENST00000464480 FGF10O15520 208 aaPredicted RBP5.27□□□□□ -1.57
HMGXB4-205ENST00000464480 RAPGEF3O95398 923 aa5.27□□□□□ -1.57
HMGXB4-205ENST00000464480 TBC1D8O95759 1140 aa5.27□□□□□ -1.57
HMGXB4-205ENST00000464480 C6orf222P0C671 652 aaPredicted RBP5.27□□□□□ -1.57
HMGXB4-205ENST00000464480 NAT1P18440 290 aa5.27□□□□□ -1.57
HMGXB4-205ENST00000464480 CYP4F3Q08477 520 aa5.27□□□□□ -1.57
HMGXB4-205ENST00000464480 DUSP4Q13115 394 aa5.27□□□□□ -1.57
HMGXB4-205ENST00000464480 DALRD3Q5D0E6 543 aaKnown RBP5.27□□□□□ -1.57
HMGXB4-205ENST00000464480 IQCEQ6IPM2 695 aa5.27□□□□□ -1.57
HMGXB4-205ENST00000464480 STYK1Q6J9G0 422 aa5.27□□□□□ -1.57
HMGXB4-205ENST00000464480 FRS2Q8WU20 508 aa5.27□□□□□ -1.57
HMGXB4-205ENST00000464480 BCL7CQ8WUZ0 217 aaPredicted RBP5.27□□□□□ -1.57
HMGXB4-205ENST00000464480 PTCHD1Q96NR3 888 aa5.27□□□□□ -1.57
HMGXB4-205ENST00000464480 ZFYVE21Q9BQ24 234 aa5.27□□□□□ -1.57
HMGXB4-205ENST00000464480 SPC25Q9HBM1 224 aa5.27□□□□□ -1.57
HMGXB4-205ENST00000464480 GPRC5CQ9NQ84 441 aa5.27□□□□□ -1.57
HMGXB4-205ENST00000464480 LMCD1Q9NZU5 365 aa5.27□□□□□ -1.57
HMGXB4-205ENST00000464480 CLEC1BQ9P126 229 aa5.27□□□□□ -1.57
HMGXB4-205ENST00000464480 ANGEL1Q9UNK9 670 aaKnown RBP5.27□□□□□ -1.57
HMGXB4-205ENST00000464480 NPHP3-ACAD11A0A0J9YXS1 232 aa5.26□□□□□ -1.57
HMGXB4-205ENST00000464480 BLACEA4D250 179 aa5.26□□□□□ -1.57
HMGXB4-205ENST00000464480 DNAJC6O75061 913 aa5.26□□□□□ -1.57
HMGXB4-205ENST00000464480 PRNPP04156 253 aa5.26□□□□□ -1.57
HMGXB4-205ENST00000464480 PLS3P13797 630 aa5.26□□□□□ -1.57
HMGXB4-205ENST00000464480 LTBRP36941 435 aa5.26□□□□□ -1.57
HMGXB4-205ENST00000464480 CBX2Q14781 532 aaPredicted RBP5.26□□□□□ -1.57
HMGXB4-205ENST00000464480 TESK1Q15569 626 aa5.26□□□□□ -1.57
HMGXB4-205ENST00000464480 NTRK3Q16288 839 aa5.26□□□□□ -1.57
HMGXB4-205ENST00000464480 XP32Q5T750 250 aa5.26□□□□□ -1.57
HMGXB4-205ENST00000464480 RSPO2Q6UXX9 243 aaPredicted RBP5.26□□□□□ -1.57
HMGXB4-205ENST00000464480 FILIP1Q7Z7B0 1213 aa5.26□□□□□ -1.57
HMGXB4-205ENST00000464480 KREMEN2Q8NCW0 462 aa5.26□□□□□ -1.57
HMGXB4-205ENST00000464480 DIO2Q92813 273 aa5.26□□□□□ -1.57
HMGXB4-205ENST00000464480 MMP19Q99542 508 aa5.26□□□□□ -1.57
HMGXB4-205ENST00000464480 CARS2Q9HA77 564 aaKnown RBP5.26□□□□□ -1.57
HMGXB4-205ENST00000464480 SLC52A2Q9HAB3 445 aa5.26□□□□□ -1.57
HMGXB4-205ENST00000464480 PCMTD2Q9NV79 361 aa5.26□□□□□ -1.57
HMGXB4-205ENST00000464480 INTS7Q9NVH2 962 aaKnown RBP5.26□□□□□ -1.57
HMGXB4-205ENST00000464480 ERVK13-1Q9NX77 482 aa5.26□□□□□ -1.57
HMGXB4-205ENST00000464480 TMEM82A0PJX8 343 aa5.25□□□□□ -1.57
HMGXB4-205ENST00000464480 IRS4O14654 1257 aaPredicted RBP5.25□□□□□ -1.57
HMGXB4-205ENST00000464480 KCNQ2O43526 872 aa5.25□□□□□ -1.57
HMGXB4-205ENST00000464480 MYO1BO43795 1136 aa5.25□□□□□ -1.57
HMGXB4-205ENST00000464480 ZP2Q05996 745 aa5.25□□□□□ -1.57
HMGXB4-205ENST00000464480 BNIP3Q12983 259 aa5.25□□□□□ -1.57
HMGXB4-205ENST00000464480 LAPTM5Q13571 262 aa5.25□□□□□ -1.57
HMGXB4-205ENST00000464480 C21orf62-AS1Q17RA5 79 aa5.25□□□□□ -1.57
HMGXB4-205ENST00000464480 TM4SF20Q53R12 229 aa5.25□□□□□ -1.57
HMGXB4-205ENST00000464480 HLA-DQA1Q5Y7H0 255 aa5.25□□□□□ -1.57
HMGXB4-205ENST00000464480 BRAPQ7Z569 592 aa5.25□□□□□ -1.57
HMGXB4-205ENST00000464480 MTDHQ86UE4 582 aaKnown RBP5.25□□□□□ -1.57
HMGXB4-205ENST00000464480 DTX1Q86Y01 620 aa5.25□□□□□ -1.57
HMGXB4-205ENST00000464480 GSTCDQ8NEC7 633 aa5.25□□□□□ -1.57
HMGXB4-205ENST00000464480 FLCNQ8NFG4 579 aa5.25□□□□□ -1.57
HMGXB4-205ENST00000464480 ZCRB1Q8TBF4 217 aaKnown RBP5.25□□□□□ -1.57
HMGXB4-205ENST00000464480 CCDC120Q96HB5 630 aa5.25□□□□□ -1.57
HMGXB4-205ENST00000464480 MAP6Q96JE9 813 aa5.25□□□□□ -1.57
HMGXB4-205ENST00000464480 PHF20Q9BVI0 1012 aa5.25□□□□□ -1.57
HMGXB4-205ENST00000464480 GPR27Q9NS67 375 aa5.25□□□□□ -1.57
HMGXB4-205ENST00000464480 MAGEC2Q9UBF1 373 aaPredicted RBP5.25□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms