RNA–Protein interactions for RNA: ENST00000463684.1

SMC1A-204, Transcript of structural maintenance of chromosomes 1A, humanhuman

TSL 2

Gene SMC1A, Length 880 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1A-204ENST00000463684 TMEM232C9JQI7 657 aa17.25■□□□□ 0.35
SMC1A-204ENST00000463684 MYOGP15173 224 aa17.25■□□□□ 0.35
SMC1A-204ENST00000463684 TFF2Q03403 129 aa17.25■□□□□ 0.35
SMC1A-204ENST00000463684 IKQ13123 557 aaPredicted RBP17.25■□□□□ 0.35
SMC1A-204ENST00000463684 TKFCQ3LXA3 575 aa17.25■□□□□ 0.35
SMC1A-204ENST00000463684 SLFN13Q68D06 897 aa17.25■□□□□ 0.35
SMC1A-204ENST00000463684 SIRT2Q8IXJ6 389 aa17.25■□□□□ 0.35
SMC1A-204ENST00000463684 CHURC1Q8WUH1 139 aa17.25■□□□□ 0.35
SMC1A-204ENST00000463684 CEP95Q96GE4 821 aa17.25■□□□□ 0.35
SMC1A-204ENST00000463684 SCLYQ96I15 445 aa17.25■□□□□ 0.35
SMC1A-204ENST00000463684 WNT8AQ9H1J5 351 aa17.25■□□□□ 0.35
SMC1A-204ENST00000463684 A1CFQ9NQ94 594 aaKnown RBP17.25■□□□□ 0.35
SMC1A-204ENST00000463684 RNF146Q9NTX7 359 aa17.25■□□□□ 0.35
SMC1A-204ENST00000463684 Q9Y3F1 56 aa17.25■□□□□ 0.35
SMC1A-204ENST00000463684 ERC2O15083 957 aa17.24■□□□□ 0.35
SMC1A-204ENST00000463684 PRDM1O75626 825 aa17.24■□□□□ 0.35
SMC1A-204ENST00000463684 APPP05067 770 aa17.24■□□□□ 0.35
SMC1A-204ENST00000463684 PFKMP08237 780 aa17.24■□□□□ 0.35
SMC1A-204ENST00000463684 SUPT20HL2P0C7V6 817 aa17.24■□□□□ 0.35
SMC1A-204ENST00000463684 SMPD1P17405 629 aa17.24■□□□□ 0.35
SMC1A-204ENST00000463684 TDO2P48775 406 aa17.24■□□□□ 0.35
SMC1A-204ENST00000463684 STAT2P52630 851 aa17.24■□□□□ 0.35
SMC1A-204ENST00000463684 PSMC6P62333 389 aa17.24■□□□□ 0.35
SMC1A-204ENST00000463684 TMEM67Q5HYA8 995 aa17.24■□□□□ 0.35
SMC1A-204ENST00000463684 FAM160B2Q86V87 743 aa17.24■□□□□ 0.35
SMC1A-204ENST00000463684 LRRC47Q8N1G4 583 aaKnown RBP17.24■□□□□ 0.35
SMC1A-204ENST00000463684 AGBL1Q96MI9 1066 aa17.24■□□□□ 0.35
SMC1A-204ENST00000463684 TRERF1Q96PN7 1200 aa17.24■□□□□ 0.35
SMC1A-204ENST00000463684 ALAS1P13196 640 aa17.23■□□□□ 0.35
SMC1A-204ENST00000463684 KCNQ1P51787 676 aa17.23■□□□□ 0.35
SMC1A-204ENST00000463684 EEPD1Q7L9B9 569 aa17.23■□□□□ 0.35
SMC1A-204ENST00000463684 PDGFCQ9NRA1 345 aa17.23■□□□□ 0.35
SMC1A-204ENST00000463684 DDX19BQ9UMR2 479 aa17.23■□□□□ 0.35
SMC1A-204ENST00000463684 XIRP2A4UGR9 3374 aa17.22■□□□□ 0.35
SMC1A-204ENST00000463684 TSPY3P0CV98 308 aa17.22■□□□□ 0.35
SMC1A-204ENST00000463684 TSPY8P0CW00 308 aa17.22■□□□□ 0.35
SMC1A-204ENST00000463684 ACTN1P12814 892 aa17.22■□□□□ 0.35
SMC1A-204ENST00000463684 GNAT2P19087 354 aa17.22■□□□□ 0.35
SMC1A-204ENST00000463684 POU3F3P20264 500 aaPredicted RBP17.22■□□□□ 0.35
SMC1A-204ENST00000463684 TAPT1Q6NXT6 567 aa17.22■□□□□ 0.35
SMC1A-204ENST00000463684 KIAA1211Q6ZU35 1233 aa17.22■□□□□ 0.35
SMC1A-204ENST00000463684 STAG1Q8WVM7 1258 aa17.22■□□□□ 0.35
SMC1A-204ENST00000463684 ALDH8A1Q9H2A2 487 aaPredicted RBP17.22■□□□□ 0.35
SMC1A-204ENST00000463684 COG5Q9UP83 839 aa17.22■□□□□ 0.35
SMC1A-204ENST00000463684 MTCH2Q9Y6C9 303 aa17.22■□□□□ 0.35
SMC1A-204ENST00000463684 RFXAPO00287 272 aa17.21■□□□□ 0.35
SMC1A-204ENST00000463684 CA3P07451 260 aa17.21■□□□□ 0.35
SMC1A-204ENST00000463684 SLC1A4P43007 532 aa17.21■□□□□ 0.35
SMC1A-204ENST00000463684 HNRNPUQ00839 825 aaKnown RBP eCLIP17.21■□□□□ 0.35
SMC1A-204ENST00000463684 TTLL4Q14679 1199 aa17.21■□□□□ 0.35
SMC1A-204ENST00000463684 DEFB128Q7Z7B8 93 aa17.21■□□□□ 0.35
SMC1A-204ENST00000463684 FBXO16Q8IX29 292 aaPredicted RBP17.21■□□□□ 0.35
SMC1A-204ENST00000463684 APPBP2Q92624 585 aa17.21■□□□□ 0.35
SMC1A-204ENST00000463684 OSBP2Q969R2 916 aa17.21■□□□□ 0.35
SMC1A-204ENST00000463684 LRRCC1Q9C099 1032 aa17.21■□□□□ 0.35
SMC1A-204ENST00000463684 CHMP4BQ9H444 224 aaKnown RBP17.21■□□□□ 0.35
SMC1A-204ENST00000463684 VTA1Q9NP79 307 aa17.21■□□□□ 0.35
SMC1A-204ENST00000463684 ZBTB40Q9NUA8 1239 aa17.21■□□□□ 0.35
SMC1A-204ENST00000463684 POLR3EQ9NVU0 708 aa17.21■□□□□ 0.35
SMC1A-204ENST00000463684 HCN4Q9Y3Q4 1203 aa17.21■□□□□ 0.35
SMC1A-204ENST00000463684 CHD7Q9P2D1 2997 aa17.21■□□□□ 0.35
SMC1A-204ENST00000463684 ZNF536O15090 1300 aa17.21■□□□□ 0.34
SMC1A-204ENST00000463684 SLC3A2P08195 630 aaKnown RBP17.2■□□□□ 0.34
SMC1A-204ENST00000463684 PTGS1P23219 599 aa17.2■□□□□ 0.34
SMC1A-204ENST00000463684 PDE4BQ07343 736 aa17.2■□□□□ 0.34
SMC1A-204ENST00000463684 KBTBD3Q8NAB2 608 aa17.2■□□□□ 0.34
SMC1A-204ENST00000463684 NEDD1Q8NHV4 660 aa17.2■□□□□ 0.34
SMC1A-204ENST00000463684 GMCL1Q96IK5 515 aa17.2■□□□□ 0.34
SMC1A-204ENST00000463684 CERS4Q9HA82 394 aa17.2■□□□□ 0.34
SMC1A-204ENST00000463684 GPHNQ9NQX3 736 aaPredicted RBP17.2■□□□□ 0.34
SMC1A-204ENST00000463684 ECHDC1Q9NTX5 307 aa17.2■□□□□ 0.34
SMC1A-204ENST00000463684 TRMT13Q9NUP7 481 aaKnown RBP17.2■□□□□ 0.34
SMC1A-204ENST00000463684 ARIH1Q9Y4X5 557 aaPredicted RBP17.2■□□□□ 0.34
SMC1A-204ENST00000463684 GREB1LQ9C091 1923 aaPredicted RBP17.19■□□□□ 0.34
SMC1A-204ENST00000463684 KIF28PB7ZC32 967 aa17.19■□□□□ 0.34
SMC1A-204ENST00000463684 PATL2C9JE40 543 aaKnown RBP17.19■□□□□ 0.34
SMC1A-204ENST00000463684 RNF113AO15541 343 aaKnown RBP17.19■□□□□ 0.34
SMC1A-204ENST00000463684 GPAA1O43292 621 aa17.19■□□□□ 0.34
SMC1A-204ENST00000463684 PLA2G6O60733 806 aa17.19■□□□□ 0.34
SMC1A-204ENST00000463684 ZFYP08048 801 aaPredicted RBP17.19■□□□□ 0.34
SMC1A-204ENST00000463684 CYP2C9P11712 490 aa17.19■□□□□ 0.34
SMC1A-204ENST00000463684 MCCP23508 829 aa17.19■□□□□ 0.34
SMC1A-204ENST00000463684 HOXD11P31277 338 aaPredicted RBP17.19■□□□□ 0.34
SMC1A-204ENST00000463684 TFAP4Q01664 338 aa17.19■□□□□ 0.34
SMC1A-204ENST00000463684 PPP4R3BQ5MIZ7 849 aa17.19■□□□□ 0.34
SMC1A-204ENST00000463684 NSMFQ6X4W1 530 aa17.19■□□□□ 0.34
SMC1A-204ENST00000463684 PHOSPHO2Q8TCD6 241 aa17.19■□□□□ 0.34
SMC1A-204ENST00000463684 CHMP4CQ96CF2 233 aa17.19■□□□□ 0.34
SMC1A-204ENST00000463684 VWCEQ96DN2 955 aa17.19■□□□□ 0.34
SMC1A-204ENST00000463684 SLC9A7Q96T83 725 aa17.19■□□□□ 0.34
SMC1A-204ENST00000463684 LRFN3Q9BTN0 628 aa17.19■□□□□ 0.34
SMC1A-204ENST00000463684 NACAP1Q9BZK3 213 aa17.19■□□□□ 0.34
SMC1A-204ENST00000463684 EPB41L4AQ9HCS5 686 aaPredicted RBP17.19■□□□□ 0.34
SMC1A-204ENST00000463684 CYP39A1Q9NYL5 469 aa17.19■□□□□ 0.34
SMC1A-204ENST00000463684 DDX49Q9Y6V7 483 aaKnown RBP17.19■□□□□ 0.34
SMC1A-204ENST00000463684 TNKSO95271 1327 aa17.19■□□□□ 0.34
SMC1A-204ENST00000463684 MYL3P08590 195 aa17.18■□□□□ 0.34
SMC1A-204ENST00000463684 RFC2P35250 354 aa17.18■□□□□ 0.34
SMC1A-204ENST00000463684 CPT1AP50416 773 aa17.18■□□□□ 0.34
SMC1A-204ENST00000463684 DUSP28Q4G0W2 176 aa17.18■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 57.7 ms