RNA–Protein interactions for RNA: ENST00000463487.1

COL9A3-204, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 5

Gene COL9A3, Length 760 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-204ENST00000463487 MTMR8Q96EF0 704 aa22.94■■□□□ 1.26
COL9A3-204ENST00000463487 MAF1Q9H063 256 aa22.94■■□□□ 1.26
COL9A3-204ENST00000463487 BIN2Q9UBW5 565 aaPredicted RBP22.94■■□□□ 1.26
COL9A3-204ENST00000463487 MRPL11Q9Y3B7 192 aaKnown RBP22.94■■□□□ 1.26
COL9A3-204ENST00000463487 NID2Q14112 1375 aa22.93■■□□□ 1.26
COL9A3-204ENST00000463487 DOCK3Q8IZD9 2030 aa22.93■■□□□ 1.26
COL9A3-204ENST00000463487 MYH6P13533 1939 aa22.93■■□□□ 1.26
COL9A3-204ENST00000463487 PLEKHA8P1O95397 391 aa22.93■■□□□ 1.26
COL9A3-204ENST00000463487 HOXC6P09630 235 aa22.93■■□□□ 1.26
COL9A3-204ENST00000463487 CPLX2Q6PUV4 134 aaKnown RBP22.93■■□□□ 1.26
COL9A3-204ENST00000463487 USP6NLQ92738 828 aa22.93■■□□□ 1.26
COL9A3-204ENST00000463487 PIGSQ96S52 555 aa22.93■■□□□ 1.26
COL9A3-204ENST00000463487 HPS5Q9UPZ3 1129 aa22.93■■□□□ 1.26
COL9A3-204ENST00000463487 CYTH3O43739 400 aa22.92■■□□□ 1.26
COL9A3-204ENST00000463487 PDIA3P30101 505 aaKnown RBP22.92■■□□□ 1.26
COL9A3-204ENST00000463487 UBXN2AP68543 259 aa22.92■■□□□ 1.26
COL9A3-204ENST00000463487 MCF2L2Q86YR7 1114 aa22.92■■□□□ 1.26
COL9A3-204ENST00000463487 SRBD1Q8N5C6 995 aaKnown RBP22.92■■□□□ 1.26
COL9A3-204ENST00000463487 RBM27Q9P2N5 1060 aaKnown RBP22.92■■□□□ 1.26
COL9A3-204ENST00000463487 AK2P54819 239 aa22.91■■□□□ 1.26
COL9A3-204ENST00000463487 RABEP1Q15276 862 aa22.91■■□□□ 1.26
COL9A3-204ENST00000463487 DIS3Q9Y2L1 958 aaKnown RBP22.91■■□□□ 1.26
COL9A3-204ENST00000463487 CPLX1O14810 134 aa22.9■■□□□ 1.26
COL9A3-204ENST00000463487 HMGCRP04035 888 aa22.9■■□□□ 1.26
COL9A3-204ENST00000463487 AKAP17AQ02040 695 aaKnown RBP22.9■■□□□ 1.26
COL9A3-204ENST00000463487 NSMFQ6X4W1 530 aa22.9■■□□□ 1.26
COL9A3-204ENST00000463487 CCDC82Q8N4S0 544 aa22.9■■□□□ 1.26
COL9A3-204ENST00000463487 PIBF1Q8WXW3 757 aa22.9■■□□□ 1.26
COL9A3-204ENST00000463487 TBC1D32Q96NH3 1257 aa22.9■■□□□ 1.26
COL9A3-204ENST00000463487 SLKQ9H2G2 1235 aaPredicted RBP22.9■■□□□ 1.26
COL9A3-204ENST00000463487 A1CFQ9NQ94 594 aaKnown RBP22.9■■□□□ 1.26
COL9A3-204ENST00000463487 PCDHA1Q9Y5I3 950 aa22.9■■□□□ 1.26
COL9A3-204ENST00000463487 POTEB2H3BUK9 544 aa22.89■■□□□ 1.25
COL9A3-204ENST00000463487 ST18O60284 1047 aa22.89■■□□□ 1.25
COL9A3-204ENST00000463487 MUM1L1Q5H9M0 696 aa22.89■■□□□ 1.25
COL9A3-204ENST00000463487 MFSD14CQ5VZR4 134 aa22.89■■□□□ 1.25
COL9A3-204ENST00000463487 CMTR1Q8N1G2 835 aaKnown RBP22.89■■□□□ 1.25
COL9A3-204ENST00000463487 PTPDC1A2A3K4 754 aa22.88■■□□□ 1.25
COL9A3-204ENST00000463487 PGK2P07205 417 aa22.88■■□□□ 1.25
COL9A3-204ENST00000463487 ELNP15502 786 aa22.88■■□□□ 1.25
COL9A3-204ENST00000463487 CDC27P30260 824 aa22.88■■□□□ 1.25
COL9A3-204ENST00000463487 CCT2P78371 535 aaKnown RBP22.88■■□□□ 1.25
COL9A3-204ENST00000463487 OLFML2BQ68BL8 750 aa22.88■■□□□ 1.25
COL9A3-204ENST00000463487 RNF207Q6ZRF8 634 aa22.88■■□□□ 1.25
COL9A3-204ENST00000463487 RGS22Q8NE09 1264 aa22.88■■□□□ 1.25
COL9A3-204ENST00000463487 SH3TC2Q8TF17 1288 aa22.88■■□□□ 1.25
COL9A3-204ENST00000463487 ARMC5Q96C12 935 aa22.88■■□□□ 1.25
COL9A3-204ENST00000463487 CYP39A1Q9NYL5 469 aa22.88■■□□□ 1.25
COL9A3-204ENST00000463487 CNTNAP5Q8WYK1 1306 aa22.87■■□□□ 1.25
COL9A3-204ENST00000463487 DNAJC25-GNG10A0A024R161 153 aa22.87■■□□□ 1.25
COL9A3-204ENST00000463487 hCG_1984214I3L0E3 225 aa22.87■■□□□ 1.25
COL9A3-204ENST00000463487 NFIBO00712 420 aa22.87■■□□□ 1.25
COL9A3-204ENST00000463487 COBLO75128 1261 aa22.87■■□□□ 1.25
COL9A3-204ENST00000463487 CDKL5O76039 1030 aa22.87■■□□□ 1.25
COL9A3-204ENST00000463487 ADD1P35611 737 aaKnown RBP22.87■■□□□ 1.25
COL9A3-204ENST00000463487 SLC35G1Q2M3R5 365 aa22.87■■□□□ 1.25
COL9A3-204ENST00000463487 TRIM22Q8IYM9 498 aa22.87■■□□□ 1.25
COL9A3-204ENST00000463487 MSL3Q8N5Y2 521 aaKnown RBP22.87■■□□□ 1.25
COL9A3-204ENST00000463487 SAMD3Q8N6K7 520 aa22.87■■□□□ 1.25
COL9A3-204ENST00000463487 ZNF713Q8N859 430 aaPredicted RBP22.87■■□□□ 1.25
COL9A3-204ENST00000463487 CLEC4DQ8WXI8 215 aa22.87■■□□□ 1.25
COL9A3-204ENST00000463487 ABHD8Q96I13 439 aa22.87■■□□□ 1.25
COL9A3-204ENST00000463487 MPHOSPH6Q99547 160 aaKnown RBP22.87■■□□□ 1.25
COL9A3-204ENST00000463487 FAM217BQ9NTX9 383 aaPredicted RBP22.87■■□□□ 1.25
COL9A3-204ENST00000463487 ZNFX1Q9P2E3 1918 aaKnown RBP22.86■■□□□ 1.25
COL9A3-204ENST00000463487 BAZ2BQ9UIF8 2168 aaKnown RBP22.86■■□□□ 1.25
COL9A3-204ENST00000463487 STK3Q13188 491 aa22.86■■□□□ 1.25
COL9A3-204ENST00000463487 ZNF792Q3KQV3 632 aa22.86■■□□□ 1.25
COL9A3-204ENST00000463487 ZNF467Q7Z7K2 595 aaPredicted RBP22.86■■□□□ 1.25
COL9A3-204ENST00000463487 NPLOC4Q8TAT6 608 aa22.86■■□□□ 1.25
COL9A3-204ENST00000463487 TRIB2Q92519 343 aa22.86■■□□□ 1.25
COL9A3-204ENST00000463487 MAML3Q96JK9 1138 aa22.86■■□□□ 1.25
COL9A3-204ENST00000463487 LARP6Q9BRS8 491 aaKnown RBP22.86■■□□□ 1.25
COL9A3-204ENST00000463487 MAP3K20Q9NYL2 800 aaKnown RBP22.86■■□□□ 1.25
COL9A3-204ENST00000463487 ADD3Q9UEY8 706 aaKnown RBP22.86■■□□□ 1.25
COL9A3-204ENST00000463487 B4DLN1 442 aa22.85■■□□□ 1.25
COL9A3-204ENST00000463487 INHAP05111 366 aa22.85■■□□□ 1.25
COL9A3-204ENST00000463487 IFNAR1P17181 557 aa22.85■■□□□ 1.25
COL9A3-204ENST00000463487 MRPL12P52815 198 aaKnown RBP22.85■■□□□ 1.25
COL9A3-204ENST00000463487 BAATQ14032 418 aaPredicted RBP22.85■■□□□ 1.25
COL9A3-204ENST00000463487 NOL8Q76FK4 1167 aaKnown RBP22.85■■□□□ 1.25
COL9A3-204ENST00000463487 HEATR3Q7Z4Q2 680 aa22.85■■□□□ 1.25
COL9A3-204ENST00000463487 KIF2CQ99661 725 aa22.85■■□□□ 1.25
COL9A3-204ENST00000463487 TPCN1Q9ULQ1 816 aa22.85■■□□□ 1.25
COL9A3-204ENST00000463487 LIMCH1Q9UPQ0 1083 aa22.85■■□□□ 1.25
COL9A3-204ENST00000463487 V9GY48 417 aaPredicted RBP22.85■■□□□ 1.25
COL9A3-204ENST00000463487 PFKFB2O60825 505 aa22.84■■□□□ 1.25
COL9A3-204ENST00000463487 PPP1R11O60927 126 aaPredicted RBP22.84■■□□□ 1.25
COL9A3-204ENST00000463487 TAL1P17542 331 aaPredicted RBP22.84■■□□□ 1.25
COL9A3-204ENST00000463487 CALML3P27482 149 aa22.84■■□□□ 1.25
COL9A3-204ENST00000463487 FUT2Q10981 343 aa22.84■■□□□ 1.25
COL9A3-204ENST00000463487 CCL14Q16627 93 aa22.84■■□□□ 1.25
COL9A3-204ENST00000463487 ZNF333Q96JL9 665 aa22.84■■□□□ 1.25
COL9A3-204ENST00000463487 RNF26Q9BY78 433 aaPredicted RBP22.84■■□□□ 1.25
COL9A3-204ENST00000463487 NCOA5Q9HCD5 579 aaKnown RBP22.84■■□□□ 1.25
COL9A3-204ENST00000463487 RBBP6Q7Z6E9 1792 aaKnown RBP22.84■■□□□ 1.25
COL9A3-204ENST00000463487 PLXNA1Q9UIW2 1896 aa22.83■■□□□ 1.25
COL9A3-204ENST00000463487 LOC102724159A0A0B4J2E5 919 aa22.83■■□□□ 1.25
COL9A3-204ENST00000463487 ASB14A6NK59 587 aa22.83■■□□□ 1.25
COL9A3-204ENST00000463487 CFBP00751 764 aa22.83■■□□□ 1.25
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms