RNA–Protein interactions for RNA: ENST00000463486.5

VPS52-214, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 5

Gene VPS52, Length 925 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-214ENST00000463486 BAZ2BQ9UIF8 2168 aaKnown RBP20.61■□□□□ 0.89
VPS52-214ENST00000463486 CCDC69A6NI79 296 aa20.6■□□□□ 0.89
VPS52-214ENST00000463486 SGPL1O95470 568 aa20.6■□□□□ 0.89
VPS52-214ENST00000463486 RPS6KB1P23443 525 aa20.6■□□□□ 0.89
VPS52-214ENST00000463486 MFSD14CQ5VZR4 134 aa20.6■□□□□ 0.89
VPS52-214ENST00000463486 LHX8Q68G74 356 aa20.6■□□□□ 0.89
VPS52-214ENST00000463486 MAMDC4Q6UXC1 1216 aa20.6■□□□□ 0.89
VPS52-214ENST00000463486 NUP133Q8WUM0 1156 aa20.6■□□□□ 0.89
VPS52-214ENST00000463486 TINF2Q9BSI4 451 aa20.6■□□□□ 0.89
VPS52-214ENST00000463486 ZSWIM6Q9HCJ5 1215 aa20.6■□□□□ 0.89
VPS52-214ENST00000463486 HMX1Q9NP08 348 aaPredicted RBP20.6■□□□□ 0.89
VPS52-214ENST00000463486 PNMA2Q9UL42 364 aa20.6■□□□□ 0.89
VPS52-214ENST00000463486 PLXNA1Q9UIW2 1896 aa20.6■□□□□ 0.89
VPS52-214ENST00000463486 SOWAHBA6NEL2 793 aa20.59■□□□□ 0.89
VPS52-214ENST00000463486 CYBAP13498 195 aa20.59■□□□□ 0.89
VPS52-214ENST00000463486 RXRAP19793 462 aa20.59■□□□□ 0.89
VPS52-214ENST00000463486 C8orf34Q49A92 452 aa20.59■□□□□ 0.89
VPS52-214ENST00000463486 APOA5Q6Q788 366 aa20.59■□□□□ 0.89
VPS52-214ENST00000463486 NFXL1Q6ZNB6 911 aa20.59■□□□□ 0.89
VPS52-214ENST00000463486 ZNF467Q7Z7K2 595 aaPredicted RBP20.59■□□□□ 0.89
VPS52-214ENST00000463486 U2AF1L4Q8WU68 220 aaKnown RBP20.59■□□□□ 0.89
VPS52-214ENST00000463486 IL17RAQ96F46 866 aa20.59■□□□□ 0.89
VPS52-214ENST00000463486 DEFB118Q96PH6 123 aa20.59■□□□□ 0.89
VPS52-214ENST00000463486 TM6SF1Q9BZW5 370 aa20.59■□□□□ 0.89
VPS52-214ENST00000463486 SLC12A7Q9Y666 1083 aa20.59■□□□□ 0.89
VPS52-214ENST00000463486 OPLAHO14841 1288 aa20.58■□□□□ 0.89
VPS52-214ENST00000463486 ZBTB5O15062 677 aa20.58■□□□□ 0.89
VPS52-214ENST00000463486 SNAI1O95863 264 aaPredicted RBP20.58■□□□□ 0.89
VPS52-214ENST00000463486 SMARCA1P28370 1054 aa20.58■□□□□ 0.89
VPS52-214ENST00000463486 PRAMEF19Q5SWL8 479 aa20.58■□□□□ 0.89
VPS52-214ENST00000463486 BLOC1S2Q6QNY1 142 aa20.58■□□□□ 0.89
VPS52-214ENST00000463486 UBE2Q1Q7Z7E8 422 aa20.58■□□□□ 0.89
VPS52-214ENST00000463486 RAB11FIP4Q86YS3 637 aa20.58■□□□□ 0.89
VPS52-214ENST00000463486 SRBD1Q8N5C6 995 aaKnown RBP20.58■□□□□ 0.89
VPS52-214ENST00000463486 FANCBQ8NB91 859 aa20.58■□□□□ 0.89
VPS52-214ENST00000463486 RGS22Q8NE09 1264 aa20.58■□□□□ 0.89
VPS52-214ENST00000463486 PURBQ96QR8 312 aaKnown RBP20.58■□□□□ 0.89
VPS52-214ENST00000463486 PIGSQ96S52 555 aa20.58■□□□□ 0.89
VPS52-214ENST00000463486 LCTP09848 1927 aa20.58■□□□□ 0.88
VPS52-214ENST00000463486 PFASO15067 1338 aa20.57■□□□□ 0.88
VPS52-214ENST00000463486 POTEB2H3BUK9 544 aa20.57■□□□□ 0.88
VPS52-214ENST00000463486 PLEKHA8P1O95397 391 aa20.57■□□□□ 0.88
VPS52-214ENST00000463486 CALM1P0DP23 149 aa20.57■□□□□ 0.88
VPS52-214ENST00000463486 CALM2P0DP24 149 aa20.57■□□□□ 0.88
VPS52-214ENST00000463486 CALM3P0DP25 149 aa20.57■□□□□ 0.88
VPS52-214ENST00000463486 CASTP20810 708 aaKnown RBP20.57■□□□□ 0.88
VPS52-214ENST00000463486 PSMA5P28066 241 aa20.57■□□□□ 0.88
VPS52-214ENST00000463486 BAATQ14032 418 aaPredicted RBP20.57■□□□□ 0.88
VPS52-214ENST00000463486 USH1GQ495M9 461 aa20.57■□□□□ 0.88
VPS52-214ENST00000463486 Q6ZUG5 572 aa20.57■□□□□ 0.88
VPS52-214ENST00000463486 MSL3Q8N5Y2 521 aaKnown RBP20.57■□□□□ 0.88
VPS52-214ENST00000463486 CTCFLQ8NI51 663 aaPredicted RBP20.57■□□□□ 0.88
VPS52-214ENST00000463486 TBC1D5Q92609 795 aa20.57■□□□□ 0.88
VPS52-214ENST00000463486 SPZ1Q9BXG8 430 aa20.57■□□□□ 0.88
VPS52-214ENST00000463486 FAM217BQ9NTX9 383 aaPredicted RBP20.57■□□□□ 0.88
VPS52-214ENST00000463486 SYNGAP1Q96PV0 1343 aa20.56■□□□□ 0.88
VPS52-214ENST00000463486 ZNF865P0CJ78 1059 aaPredicted RBP20.56■□□□□ 0.88
VPS52-214ENST00000463486 KIF5BP33176 963 aa20.56■□□□□ 0.88
VPS52-214ENST00000463486 MNX1P50219 401 aaPredicted RBP20.56■□□□□ 0.88
VPS52-214ENST00000463486 EVCP57679 992 aa20.56■□□□□ 0.88
VPS52-214ENST00000463486 FUT2Q10981 343 aa20.56■□□□□ 0.88
VPS52-214ENST00000463486 NSMFQ6X4W1 530 aa20.56■□□□□ 0.88
VPS52-214ENST00000463486 RUFY3Q7L099 469 aa20.56■□□□□ 0.88
VPS52-214ENST00000463486 FBXO11Q86XK2 927 aa20.56■□□□□ 0.88
VPS52-214ENST00000463486 CCDC144CPQ8IYA2 1237 aa20.56■□□□□ 0.88
VPS52-214ENST00000463486 CMTR1Q8N1G2 835 aaKnown RBP20.56■□□□□ 0.88
VPS52-214ENST00000463486 KATNBL1Q9H079 304 aa20.56■□□□□ 0.88
VPS52-214ENST00000463486 ABCB11O95342 1321 aa20.55■□□□□ 0.88
VPS52-214ENST00000463486 PNMA6FA0A0J9YX94 578 aa20.55■□□□□ 0.88
VPS52-214ENST00000463486 DHX16O60231 1041 aaKnown RBP20.55■□□□□ 0.88
VPS52-214ENST00000463486 GHRHRQ02643 423 aa20.55■□□□□ 0.88
VPS52-214ENST00000463486 SLC30A10Q6XR72 485 aa20.55■□□□□ 0.88
VPS52-214ENST00000463486 TMTC3Q6ZXV5 915 aa20.55■□□□□ 0.88
VPS52-214ENST00000463486 MICU3Q86XE3 530 aa20.55■□□□□ 0.88
VPS52-214ENST00000463486 LZTS2Q9BRK4 669 aa20.55■□□□□ 0.88
VPS52-214ENST00000463486 AMNQ9BXJ7 453 aa20.55■□□□□ 0.88
VPS52-214ENST00000463486 MAF1Q9H063 256 aa20.55■□□□□ 0.88
VPS52-214ENST00000463486 NRBP1Q9UHY1 535 aa20.55■□□□□ 0.88
VPS52-214ENST00000463486 OGDHLQ9ULD0 1010 aa20.55■□□□□ 0.88
VPS52-214ENST00000463486 DDX49Q9Y6V7 483 aaKnown RBP20.55■□□□□ 0.88
VPS52-214ENST00000463486 KLF18A0A0U1RQI7 1052 aa20.54■□□□□ 0.88
VPS52-214ENST00000463486 RCAN1P53805 252 aa20.54■□□□□ 0.88
VPS52-214ENST00000463486 RPS6P62753 249 aaKnown RBP20.54■□□□□ 0.88
VPS52-214ENST00000463486 APOBRQ0VD83 1088 aa20.54■□□□□ 0.88
VPS52-214ENST00000463486 TOB2Q14106 344 aaPredicted RBP20.54■□□□□ 0.88
VPS52-214ENST00000463486 MORC4Q8TE76 937 aa20.54■□□□□ 0.88
VPS52-214ENST00000463486 BRF1Q92994 677 aa20.54■□□□□ 0.88
VPS52-214ENST00000463486 ZBTB43O43298 467 aa20.53■□□□□ 0.88
VPS52-214ENST00000463486 GNAQP50148 359 aa20.53■□□□□ 0.88
VPS52-214ENST00000463486 ANAPC15P60006 121 aa20.53■□□□□ 0.88
VPS52-214ENST00000463486 RNF207Q6ZRF8 634 aa20.53■□□□□ 0.88
VPS52-214ENST00000463486 HOMER1Q86YM7 354 aa20.53■□□□□ 0.88
VPS52-214ENST00000463486 UPF3BQ9BZI7 483 aaKnown RBP20.53■□□□□ 0.88
VPS52-214ENST00000463486 COL20A1Q9P218 1284 aa20.53■□□□□ 0.88
VPS52-214ENST00000463486 DDX20Q9UHI6 824 aaKnown RBP20.53■□□□□ 0.88
VPS52-214ENST00000463486 PCDHA1Q9Y5I3 950 aa20.53■□□□□ 0.88
VPS52-214ENST00000463486 NID2Q14112 1375 aa20.52■□□□□ 0.88
VPS52-214ENST00000463486 SEPT4O43236 478 aa20.52■□□□□ 0.88
VPS52-214ENST00000463486 TFRCP02786 760 aaKnown RBP20.52■□□□□ 0.88
VPS52-214ENST00000463486 CAPN2P17655 700 aa20.52■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms