RNA–Protein interactions for RNA: ENST00000463446.1

EPHA4-210, Transcript of EPH receptor A4, humanhuman

TSL 2

Gene EPHA4, Length 579 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHA4-210ENST00000463446 IFNL1Q8IU54 200 aa8.48□□□□□ -1.05
EPHA4-210ENST00000463446 RIOX2Q8IUF8 465 aa8.48□□□□□ -1.05
EPHA4-210ENST00000463446 BLIDQ8IZY5 108 aa8.48□□□□□ -1.05
EPHA4-210ENST00000463446 SPRYD3Q8NCJ5 442 aa8.48□□□□□ -1.05
EPHA4-210ENST00000463446 PHF20Q9BVI0 1012 aa8.48□□□□□ -1.05
EPHA4-210ENST00000463446 ACAD9Q9H845 621 aa8.48□□□□□ -1.05
EPHA4-210ENST00000463446 FOXD4L1Q9NU39 408 aa8.48□□□□□ -1.05
EPHA4-210ENST00000463446 ADD3Q9UEY8 706 aaKnown RBP8.48□□□□□ -1.05
EPHA4-210ENST00000463446 STK24Q9Y6E0 443 aa8.48□□□□□ -1.05
EPHA4-210ENST00000463446 CNTNAP5Q8WYK1 1306 aa8.48□□□□□ -1.05
EPHA4-210ENST00000463446 VPS37CA5D8V6 355 aaPredicted RBP8.47□□□□□ -1.05
EPHA4-210ENST00000463446 BTBD19C9JJ37 291 aa8.47□□□□□ -1.05
EPHA4-210ENST00000463446 LAD1O00515 517 aa8.47□□□□□ -1.05
EPHA4-210ENST00000463446 CYTH3O43739 400 aa8.47□□□□□ -1.05
EPHA4-210ENST00000463446 BRD1O95696 1058 aa8.47□□□□□ -1.05
EPHA4-210ENST00000463446 SLURP2P0DP57 97 aa8.47□□□□□ -1.05
EPHA4-210ENST00000463446 FCER1AP12319 257 aa8.47□□□□□ -1.05
EPHA4-210ENST00000463446 FDPSP14324 419 aaKnown RBP8.47□□□□□ -1.05
EPHA4-210ENST00000463446 KRT85P78386 507 aa8.47□□□□□ -1.05
EPHA4-210ENST00000463446 PLS1Q14651 629 aa8.47□□□□□ -1.05
EPHA4-210ENST00000463446 NONOQ15233 471 aaKnown RBP eCLIP8.47□□□□□ -1.05
EPHA4-210ENST00000463446 PKN1Q16512 942 aa8.47□□□□□ -1.05
EPHA4-210ENST00000463446 RASAL3Q86YV0 1011 aa8.47□□□□□ -1.05
EPHA4-210ENST00000463446 CLEC10AQ8IUN9 316 aa8.47□□□□□ -1.05
EPHA4-210ENST00000463446 NOSTRINQ8IVI9 506 aa8.47□□□□□ -1.05
EPHA4-210ENST00000463446 REXO1Q8N1G1 1221 aaKnown RBP8.47□□□□□ -1.05
EPHA4-210ENST00000463446 CMTR1Q8N1G2 835 aaKnown RBP8.47□□□□□ -1.05
EPHA4-210ENST00000463446 DNERQ8NFT8 737 aa8.47□□□□□ -1.05
EPHA4-210ENST00000463446 CAPNS2Q96L46 248 aa8.47□□□□□ -1.05
EPHA4-210ENST00000463446 TRERF1Q96PN7 1200 aa8.47□□□□□ -1.05
EPHA4-210ENST00000463446 IWS1Q96ST2 819 aa8.47□□□□□ -1.05
EPHA4-210ENST00000463446 P2RX7Q99572 595 aaKnown RBP8.47□□□□□ -1.05
EPHA4-210ENST00000463446 ANP32EQ9BTT0 268 aa8.47□□□□□ -1.05
EPHA4-210ENST00000463446 SPATC1LQ9H0A9 340 aa8.47□□□□□ -1.05
EPHA4-210ENST00000463446 FZD1Q9UP38 647 aa8.47□□□□□ -1.05
EPHA4-210ENST00000463446 SSC5DA1L4H1 1573 aa8.47□□□□□ -1.05
EPHA4-210ENST00000463446 DOCK1Q14185 1865 aa8.47□□□□□ -1.05
EPHA4-210ENST00000463446 TRPM7Q96QT4 1865 aa8.47□□□□□ -1.05
EPHA4-210ENST00000463446 GOLGA6L4A6NEF3 574 aa8.46□□□□□ -1.06
EPHA4-210ENST00000463446 SPDYE16A6NNV3 312 aaPredicted RBP8.46□□□□□ -1.06
EPHA4-210ENST00000463446 STXBP3O00186 592 aa8.46□□□□□ -1.06
EPHA4-210ENST00000463446 TLR2O60603 784 aa8.46□□□□□ -1.06
EPHA4-210ENST00000463446 JAK2O60674 1132 aa8.46□□□□□ -1.06
EPHA4-210ENST00000463446 BAG4O95429 457 aaKnown RBP8.46□□□□□ -1.06
EPHA4-210ENST00000463446 SLC34A2O95436 690 aa8.46□□□□□ -1.06
EPHA4-210ENST00000463446 ALAS1P13196 640 aa8.46□□□□□ -1.06
EPHA4-210ENST00000463446 GCFC2P16383 781 aaKnown RBP8.46□□□□□ -1.06
EPHA4-210ENST00000463446 SLC4A3P48751 1232 aa8.46□□□□□ -1.06
EPHA4-210ENST00000463446 KCTD2Q14681 263 aa8.46□□□□□ -1.06
EPHA4-210ENST00000463446 TAF1CQ15572 869 aaPredicted RBP8.46□□□□□ -1.06
EPHA4-210ENST00000463446 FAM110CQ1W6H9 321 aa8.46□□□□□ -1.06
EPHA4-210ENST00000463446 NOM1Q5C9Z4 860 aaKnown RBP8.46□□□□□ -1.06
EPHA4-210ENST00000463446 SNRNP48Q6IEG0 339 aaKnown RBP8.46□□□□□ -1.06
EPHA4-210ENST00000463446 GPAT2Q6NUI2 795 aa8.46□□□□□ -1.06
EPHA4-210ENST00000463446 KCNV1Q6PIU1 500 aa8.46□□□□□ -1.06
EPHA4-210ENST00000463446 DLK2Q6UY11 383 aa8.46□□□□□ -1.06
EPHA4-210ENST00000463446 DHX30Q7L2E3 1194 aaKnown RBP eCLIP8.46□□□□□ -1.06
EPHA4-210ENST00000463446 RAB11FIP4Q86YS3 637 aa8.46□□□□□ -1.06
EPHA4-210ENST00000463446 TRMT44Q8IYL2 757 aaKnown RBP8.46□□□□□ -1.06
EPHA4-210ENST00000463446 CPXCR1Q8N123 301 aa8.46□□□□□ -1.06
EPHA4-210ENST00000463446 ANKRD35Q8N283 1001 aa8.46□□□□□ -1.06
EPHA4-210ENST00000463446 NKX2-3Q8TAU0 364 aa8.46□□□□□ -1.06
EPHA4-210ENST00000463446 NSUN6Q8TEA1 469 aaKnown RBP8.46□□□□□ -1.06
EPHA4-210ENST00000463446 CCDC34Q96HJ3 373 aa8.46□□□□□ -1.06
EPHA4-210ENST00000463446 CDHR1Q96JP9 859 aa8.46□□□□□ -1.06
EPHA4-210ENST00000463446 NUP88Q99567 741 aaPredicted RBP8.46□□□□□ -1.06
EPHA4-210ENST00000463446 CFHR5Q9BXR6 569 aa8.46□□□□□ -1.06
EPHA4-210ENST00000463446 RAB34Q9BZG1 259 aa8.46□□□□□ -1.06
EPHA4-210ENST00000463446 SAGE1Q9NXZ1 904 aa8.46□□□□□ -1.06
EPHA4-210ENST00000463446 PCDH10Q9P2E7 1040 aa8.46□□□□□ -1.06
EPHA4-210ENST00000463446 MORF4L1Q9UBU8 362 aa8.46□□□□□ -1.06
EPHA4-210ENST00000463446 DIS3Q9Y2L1 958 aaKnown RBP8.46□□□□□ -1.06
EPHA4-210ENST00000463446 GREB1LQ9C091 1923 aaPredicted RBP8.46□□□□□ -1.06
EPHA4-210ENST00000463446 MYH4Q9Y623 1939 aa8.45□□□□□ -1.06
EPHA4-210ENST00000463446 ASB14A6NK59 587 aa8.45□□□□□ -1.06
EPHA4-210ENST00000463446 MARCH6O60337 910 aa8.45□□□□□ -1.06
EPHA4-210ENST00000463446 F13A1P00488 732 aa8.45□□□□□ -1.06
EPHA4-210ENST00000463446 CFBP00751 764 aa8.45□□□□□ -1.06
EPHA4-210ENST00000463446 HOXC6P09630 235 aa8.45□□□□□ -1.06
EPHA4-210ENST00000463446 ERVK-9P63128 1117 aa8.45□□□□□ -1.06
EPHA4-210ENST00000463446 ERVK-24P63145 666 aa8.45□□□□□ -1.06
EPHA4-210ENST00000463446 KIF23Q02241 960 aaPredicted RBP8.45□□□□□ -1.06
EPHA4-210ENST00000463446 GHRHRQ02643 423 aa8.45□□□□□ -1.06
EPHA4-210ENST00000463446 COL9A3Q14050 684 aaPredicted RBP8.45□□□□□ -1.06
EPHA4-210ENST00000463446 SF3A1Q15459 793 aaKnown RBP8.45□□□□□ -1.06
EPHA4-210ENST00000463446 SHROOM1Q2M3G4 852 aaPredicted RBP8.45□□□□□ -1.06
EPHA4-210ENST00000463446 KIAA1755Q5JYT7 1200 aa8.45□□□□□ -1.06
EPHA4-210ENST00000463446 TREML2Q5T2D2 321 aa8.45□□□□□ -1.06
EPHA4-210ENST00000463446 WWC2Q6AWC2 1192 aa8.45□□□□□ -1.06
EPHA4-210ENST00000463446 CCDC174Q6PII3 467 aa8.45□□□□□ -1.06
EPHA4-210ENST00000463446 RNF207Q6ZRF8 634 aa8.45□□□□□ -1.06
EPHA4-210ENST00000463446 CLEC17AQ6ZS10 378 aa8.45□□□□□ -1.06
EPHA4-210ENST00000463446 NCAPG2Q86XI2 1143 aa8.45□□□□□ -1.06
EPHA4-210ENST00000463446 DIS3L2Q8IYB7 885 aaKnown RBP8.45□□□□□ -1.06
EPHA4-210ENST00000463446 MSL3Q8N5Y2 521 aaKnown RBP8.45□□□□□ -1.06
EPHA4-210ENST00000463446 PIBF1Q8WXW3 757 aa8.45□□□□□ -1.06
EPHA4-210ENST00000463446 BRI3BPQ8WY22 251 aa8.45□□□□□ -1.06
EPHA4-210ENST00000463446 COA7Q96BR5 231 aa8.45□□□□□ -1.06
EPHA4-210ENST00000463446 ATG4CQ96DT6 458 aa8.45□□□□□ -1.06
EPHA4-210ENST00000463446 PYM1Q9BRP8 204 aaKnown RBP8.45□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms