RNA–Protein interactions for RNA: ENST00000462899.1

SMC3-202, Transcript of structural maintenance of chromosomes 3, humanhuman

TSL 5

Gene SMC3, Length 777 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC3-202ENST00000462899 TRIP12Q14669 1992 aaPredicted RBP9.35□□□□□ -0.91
SMC3-202ENST00000462899 ATG2AQ2TAZ0 1938 aa9.35□□□□□ -0.91
SMC3-202ENST00000462899 GRIN2DO15399 1336 aa9.34□□□□□ -0.91
SMC3-202ENST00000462899 MAGEB6P1A0A0J9YX57 407 aa9.34□□□□□ -0.91
SMC3-202ENST00000462899 EPOPA6NHQ4 379 aa9.34□□□□□ -0.91
SMC3-202ENST00000462899 MPHOSPH10O00566 681 aaKnown RBP9.34□□□□□ -0.91
SMC3-202ENST00000462899 ATP2A1O14983 1001 aa9.34□□□□□ -0.91
SMC3-202ENST00000462899 POLR3DP05423 398 aaPredicted RBP9.34□□□□□ -0.91
SMC3-202ENST00000462899 C6orf222P0C671 652 aaPredicted RBP9.34□□□□□ -0.91
SMC3-202ENST00000462899 MYOGP15173 224 aa9.34□□□□□ -0.91
SMC3-202ENST00000462899 RABGGTBP53611 331 aa9.34□□□□□ -0.91
SMC3-202ENST00000462899 ACVR2BQ13705 512 aa9.34□□□□□ -0.91
SMC3-202ENST00000462899 AAK1Q2M2I8 961 aa9.34□□□□□ -0.91
SMC3-202ENST00000462899 PPP2R2DQ66LE6 453 aa9.34□□□□□ -0.91
SMC3-202ENST00000462899 IL27Q8NEV9 243 aa9.34□□□□□ -0.91
SMC3-202ENST00000462899 SDR42E1Q8WUS8 393 aa9.34□□□□□ -0.91
SMC3-202ENST00000462899 DYNLL2Q96FJ2 89 aa9.34□□□□□ -0.91
SMC3-202ENST00000462899 NOC4LQ9BVI4 516 aaKnown RBP9.34□□□□□ -0.91
SMC3-202ENST00000462899 CCDC8Q9H0W5 538 aaPredicted RBP9.34□□□□□ -0.91
SMC3-202ENST00000462899 SH2D4AQ9H788 454 aa9.34□□□□□ -0.91
SMC3-202ENST00000462899 ARHGEF10LQ9HCE6 1279 aa9.34□□□□□ -0.91
SMC3-202ENST00000462899 MCM9Q9NXL9 1143 aa9.34□□□□□ -0.91
SMC3-202ENST00000462899 ZBED9Q6R2W3 1325 aa9.33□□□□□ -0.92
SMC3-202ENST00000462899 GRXCR2A6NFK2 248 aa9.33□□□□□ -0.92
SMC3-202ENST00000462899 ARHGEF15O94989 841 aa9.33□□□□□ -0.92
SMC3-202ENST00000462899 FGBP02675 491 aa9.33□□□□□ -0.92
SMC3-202ENST00000462899 EEF2P13639 858 aaKnown RBP9.33□□□□□ -0.92
SMC3-202ENST00000462899 PDE6AP16499 860 aa9.33□□□□□ -0.92
SMC3-202ENST00000462899 ATP8B2P98198 1209 aa9.33□□□□□ -0.92
SMC3-202ENST00000462899 CCDC144BQ3MJ40 725 aa9.33□□□□□ -0.92
SMC3-202ENST00000462899 TMEM31Q5JXX7 168 aa9.33□□□□□ -0.92
SMC3-202ENST00000462899 OTOP2Q7RTS6 562 aa9.33□□□□□ -0.92
SMC3-202ENST00000462899 LCORLQ8N3X6 602 aa9.33□□□□□ -0.92
SMC3-202ENST00000462899 AGBL1Q96MI9 1066 aa9.33□□□□□ -0.92
SMC3-202ENST00000462899 GNL3Q9BVP2 549 aaKnown RBP eCLIP9.33□□□□□ -0.92
SMC3-202ENST00000462899 TEX13BQ9BXU2 312 aa9.33□□□□□ -0.92
SMC3-202ENST00000462899 CRNKL1Q9BZJ0 848 aaKnown RBP9.33□□□□□ -0.92
SMC3-202ENST00000462899 MTIF3Q9H2K0 278 aaKnown RBP9.33□□□□□ -0.92
SMC3-202ENST00000462899 ABHD16BQ9H3Z7 469 aa9.33□□□□□ -0.92
SMC3-202ENST00000462899 HIPK3Q9H422 1215 aa9.33□□□□□ -0.92
SMC3-202ENST00000462899 CDKN2AIPQ9NXV6 580 aaPredicted RBP9.33□□□□□ -0.92
SMC3-202ENST00000462899 ZHX1Q9UKY1 873 aaPredicted RBP9.33□□□□□ -0.92
SMC3-202ENST00000462899 GNEQ9Y223 722 aaKnown RBP9.33□□□□□ -0.92
SMC3-202ENST00000462899 TLR3O15455 904 aaKnown RBP9.32□□□□□ -0.92
SMC3-202ENST00000462899 B4GALT4O60513 344 aa9.32□□□□□ -0.92
SMC3-202ENST00000462899 LPXNO60711 386 aa9.32□□□□□ -0.92
SMC3-202ENST00000462899 MLLT3P42568 568 aaPredicted RBP9.32□□□□□ -0.92
SMC3-202ENST00000462899 FOSBP53539 338 aa9.32□□□□□ -0.92
SMC3-202ENST00000462899 FAM83BQ5T0W9 1011 aa9.32□□□□□ -0.92
SMC3-202ENST00000462899 C16orf86Q6ZW13 317 aa9.32□□□□□ -0.92
SMC3-202ENST00000462899 CCDC17Q96LX7 622 aa9.32□□□□□ -0.92
SMC3-202ENST00000462899 CD320Q9NPF0 282 aa9.32□□□□□ -0.92
SMC3-202ENST00000462899 COG5Q9UP83 839 aa9.32□□□□□ -0.92
SMC3-202ENST00000462899 ZNF532Q9HCE3 1301 aa9.31□□□□□ -0.92
SMC3-202ENST00000462899 C11orf97A0A1B0GVM6 126 aaPredicted RBP9.31□□□□□ -0.92
SMC3-202ENST00000462899 PI4K2BG5E9Z4 385 aa9.31□□□□□ -0.92
SMC3-202ENST00000462899 RFXAPO00287 272 aa9.31□□□□□ -0.92
SMC3-202ENST00000462899 SURF6O75683 361 aaKnown RBP9.31□□□□□ -0.92
SMC3-202ENST00000462899 CA3P07451 260 aa9.31□□□□□ -0.92
SMC3-202ENST00000462899 CDK8P49336 464 aa9.31□□□□□ -0.92
SMC3-202ENST00000462899 GNASQ5JWF2 1037 aa9.31□□□□□ -0.92
SMC3-202ENST00000462899 PPP4R3BQ5MIZ7 849 aa9.31□□□□□ -0.92
SMC3-202ENST00000462899 C12orf60Q5U649 245 aa9.31□□□□□ -0.92
SMC3-202ENST00000462899 KRT40Q6A162 431 aa9.31□□□□□ -0.92
SMC3-202ENST00000462899 SNRNP48Q6IEG0 339 aaKnown RBP9.31□□□□□ -0.92
SMC3-202ENST00000462899 ARMCX2Q7L311 632 aa9.31□□□□□ -0.92
SMC3-202ENST00000462899 MICALL1Q8N3F8 863 aa9.31□□□□□ -0.92
SMC3-202ENST00000462899 SEZ6LQ9BYH1 1024 aa9.31□□□□□ -0.92
SMC3-202ENST00000462899 KANSL2Q9H9L4 492 aa9.31□□□□□ -0.92
SMC3-202ENST00000462899 PCDHGA10Q9Y5H3 936 aa9.31□□□□□ -0.92
SMC3-202ENST00000462899 CYP2D7A0A087X1C5 515 aa9.3□□□□□ -0.92
SMC3-202ENST00000462899 FAM86C2PA6NEL3 165 aa9.3□□□□□ -0.92
SMC3-202ENST00000462899 APBB1O00213 710 aa9.3□□□□□ -0.92
SMC3-202ENST00000462899 PRKAB2O43741 272 aa9.3□□□□□ -0.92
SMC3-202ENST00000462899 BCAR3O75815 825 aa9.3□□□□□ -0.92
SMC3-202ENST00000462899 CABYRO75952 493 aa9.3□□□□□ -0.92
SMC3-202ENST00000462899 ATP2A2P16615 1042 aaKnown RBP9.3□□□□□ -0.92
SMC3-202ENST00000462899 PTGS1P23219 599 aa9.3□□□□□ -0.92
SMC3-202ENST00000462899 CCL23P55773 120 aa9.3□□□□□ -0.92
SMC3-202ENST00000462899 BEX3Q00994 111 aa9.3□□□□□ -0.92
SMC3-202ENST00000462899 ITGA7Q13683 1181 aa9.3□□□□□ -0.92
SMC3-202ENST00000462899 NBR1Q14596 966 aa9.3□□□□□ -0.92
SMC3-202ENST00000462899 TTLL4Q14679 1199 aa9.3□□□□□ -0.92
SMC3-202ENST00000462899 SLC9C2Q5TAH2 1124 aa9.3□□□□□ -0.92
SMC3-202ENST00000462899 CXCL17Q6UXB2 119 aa9.3□□□□□ -0.92
SMC3-202ENST00000462899 CCDC144CPQ8IYA2 1237 aa9.3□□□□□ -0.92
SMC3-202ENST00000462899 TMEM57Q8N5G2 664 aa9.3□□□□□ -0.92
SMC3-202ENST00000462899 FAM133AQ8N9E0 248 aa9.3□□□□□ -0.92
SMC3-202ENST00000462899 PPIL4Q8WUA2 492 aaKnown RBP eCLIP9.3□□□□□ -0.92
SMC3-202ENST00000462899 SLF1Q9BQI6 1058 aa9.3□□□□□ -0.92
SMC3-202ENST00000462899 TRPV6Q9H1D0 765 aa9.3□□□□□ -0.92
SMC3-202ENST00000462899 SPC25Q9HBM1 224 aa9.3□□□□□ -0.92
SMC3-202ENST00000462899 SLC38A10Q9HBR0 1119 aa9.3□□□□□ -0.92
SMC3-202ENST00000462899 GOPCQ9HD26 462 aa9.3□□□□□ -0.92
SMC3-202ENST00000462899 ATP8A2Q9NTI2 1148 aa9.3□□□□□ -0.92
SMC3-202ENST00000462899 SLC4A7Q9Y6M7 1214 aa9.3□□□□□ -0.92
SMC3-202ENST00000462899 DCHS1Q96JQ0 3298 aa9.29□□□□□ -0.92
SMC3-202ENST00000462899 PFKMP08237 780 aa9.29□□□□□ -0.92
SMC3-202ENST00000462899 TAP1Q03518 808 aa9.29□□□□□ -0.92
SMC3-202ENST00000462899 OS9Q13438 667 aaPredicted RBP9.29□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms