RNA–Protein interactions for RNA: ENST00000462604.1

COL8A1-204, Transcript of collagen type VIII alpha 1 chain, humanhuman

TSL 3

Gene COL8A1, Length 190 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A1-204ENST00000462604 PDE4DQ08499 809 aa3.92□□□□□ -1.78
COL8A1-204ENST00000462604 C2orf54Q08AI8 447 aa3.92□□□□□ -1.78
COL8A1-204ENST00000462604 TBC1D8BQ0IIM8 1120 aa3.92□□□□□ -1.78
COL8A1-204ENST00000462604 PPFIA1Q13136 1202 aa3.92□□□□□ -1.78
COL8A1-204ENST00000462604 ORC2Q13416 577 aaPredicted RBP3.92□□□□□ -1.78
COL8A1-204ENST00000462604 NNTQ13423 1086 aa3.92□□□□□ -1.78
COL8A1-204ENST00000462604 UBE4AQ14139 1066 aa3.92□□□□□ -1.78
COL8A1-204ENST00000462604 IL17AQ16552 155 aa3.92□□□□□ -1.78
COL8A1-204ENST00000462604 TUBB8Q3ZCM7 444 aa3.92□□□□□ -1.78
COL8A1-204ENST00000462604 SBK1Q52WX2 424 aa3.92□□□□□ -1.78
COL8A1-204ENST00000462604 FIGNQ5HY92 759 aa3.92□□□□□ -1.78
COL8A1-204ENST00000462604 SOGA3Q5TF21 947 aa3.92□□□□□ -1.78
COL8A1-204ENST00000462604 TTI2Q6NXR4 508 aa3.92□□□□□ -1.78
COL8A1-204ENST00000462604 CNNM4Q6P4Q7 775 aa3.92□□□□□ -1.78
COL8A1-204ENST00000462604 CCNI2Q6ZMN8 369 aaPredicted RBP3.92□□□□□ -1.78
COL8A1-204ENST00000462604 ZNF572Q7Z3I7 529 aaPredicted RBP3.92□□□□□ -1.78
COL8A1-204ENST00000462604 KRT25Q7Z3Z0 450 aa3.92□□□□□ -1.78
COL8A1-204ENST00000462604 HEATR3Q7Z4Q2 680 aa3.92□□□□□ -1.78
COL8A1-204ENST00000462604 CABP7Q86V35 215 aa3.92□□□□□ -1.78
COL8A1-204ENST00000462604 POTEDQ86YR6 584 aa3.92□□□□□ -1.78
COL8A1-204ENST00000462604 GIMAP8Q8ND71 665 aaPredicted RBP3.92□□□□□ -1.78
COL8A1-204ENST00000462604 ZNF507Q8TCN5 953 aa3.92□□□□□ -1.78
COL8A1-204ENST00000462604 PURBQ96QR8 312 aaKnown RBP3.92□□□□□ -1.78
COL8A1-204ENST00000462604 MTRQ99707 1265 aa3.92□□□□□ -1.78
COL8A1-204ENST00000462604 TSG101Q99816 390 aa3.92□□□□□ -1.78
COL8A1-204ENST00000462604 LZTS2Q9BRK4 669 aa3.92□□□□□ -1.78
COL8A1-204ENST00000462604 TUBGCP2Q9BSJ2 902 aa3.92□□□□□ -1.78
COL8A1-204ENST00000462604 NOC4LQ9BVI4 516 aaKnown RBP3.92□□□□□ -1.78
COL8A1-204ENST00000462604 IFIH1Q9BYX4 1025 aaKnown RBP3.92□□□□□ -1.78
COL8A1-204ENST00000462604 CCSER1Q9C0I3 900 aa3.92□□□□□ -1.78
COL8A1-204ENST00000462604 DEF6Q9H4E7 631 aa3.92□□□□□ -1.78
COL8A1-204ENST00000462604 LUC7LQ9NQ29 371 aaKnown RBP3.92□□□□□ -1.78
COL8A1-204ENST00000462604 ATP8A2Q9NTI2 1148 aa3.92□□□□□ -1.78
COL8A1-204ENST00000462604 GOLGA6AQ9NYA3 693 aa3.92□□□□□ -1.78
COL8A1-204ENST00000462604 HDAC6Q9UBN7 1215 aa3.92□□□□□ -1.78
COL8A1-204ENST00000462604 TRIM10Q9UDY6 481 aa3.92□□□□□ -1.78
COL8A1-204ENST00000462604 LRWD1Q9UFC0 647 aa3.92□□□□□ -1.78
COL8A1-204ENST00000462604 LCMT1Q9UIC8 334 aa3.92□□□□□ -1.78
COL8A1-204ENST00000462604 TSKSQ9UJT2 592 aa3.92□□□□□ -1.78
COL8A1-204ENST00000462604 FAM184BQ9ULE4 1060 aa3.92□□□□□ -1.78
COL8A1-204ENST00000462604 SNX12Q9UMY4 172 aa3.92□□□□□ -1.78
COL8A1-204ENST00000462604 MAPK8IP1Q9UQF2 711 aa3.92□□□□□ -1.78
COL8A1-204ENST00000462604 ABCB11O95342 1321 aa3.92□□□□□ -1.78
COL8A1-204ENST00000462604 UBR2Q8IWV8 1755 aa3.91□□□□□ -1.78
COL8A1-204ENST00000462604 A0A087WUV0 522 aaPredicted RBP3.91□□□□□ -1.78
COL8A1-204ENST00000462604 USP17L12C9JPN9 530 aa3.91□□□□□ -1.78
COL8A1-204ENST00000462604 USP17L21D6R901 530 aa3.91□□□□□ -1.78
COL8A1-204ENST00000462604 RNF225M0QZC1 329 aaPredicted RBP3.91□□□□□ -1.78
COL8A1-204ENST00000462604 EXOC5O00471 708 aa3.91□□□□□ -1.78
COL8A1-204ENST00000462604 STK25O00506 426 aa3.91□□□□□ -1.78
COL8A1-204ENST00000462604 EBAG9O00559 213 aa3.91□□□□□ -1.78
COL8A1-204ENST00000462604 KLRC4O43908 158 aa3.91□□□□□ -1.78
COL8A1-204ENST00000462604 SRGAP2O75044 1071 aa3.91□□□□□ -1.78
COL8A1-204ENST00000462604 PRPF6O94906 941 aaKnown RBP3.91□□□□□ -1.78
COL8A1-204ENST00000462604 CAMTA2O94983 1202 aa3.91□□□□□ -1.78
COL8A1-204ENST00000462604 ADAMTS2O95450 1211 aa3.91□□□□□ -1.78
COL8A1-204ENST00000462604 CPP00450 1065 aa3.91□□□□□ -1.78
COL8A1-204ENST00000462604 ABL1P00519 1130 aa3.91□□□□□ -1.78
COL8A1-204ENST00000462604 TFRCP02786 760 aaKnown RBP3.91□□□□□ -1.78
COL8A1-204ENST00000462604 OR52Z1P0C646 297 aa3.91□□□□□ -1.78
COL8A1-204ENST00000462604 EPB41P11171 864 aaKnown RBP3.91□□□□□ -1.78
COL8A1-204ENST00000462604 PRLRP16471 622 aa3.91□□□□□ -1.78
COL8A1-204ENST00000462604 PLCG1P19174 1290 aa3.91□□□□□ -1.78
COL8A1-204ENST00000462604 TNFRSF8P28908 595 aa3.91□□□□□ -1.78
COL8A1-204ENST00000462604 GGCXP38435 758 aa3.91□□□□□ -1.78
COL8A1-204ENST00000462604 USP8P40818 1118 aa3.91□□□□□ -1.78
COL8A1-204ENST00000462604 GYG1P46976 350 aa3.91□□□□□ -1.78
COL8A1-204ENST00000462604 GTF2A1P52655 376 aaPredicted RBP3.91□□□□□ -1.78
COL8A1-204ENST00000462604 PMS1P54277 932 aaKnown RBP3.91□□□□□ -1.78
COL8A1-204ENST00000462604 SETQ01105 290 aaPredicted RBP3.91□□□□□ -1.78
COL8A1-204ENST00000462604 PAK2Q13177 524 aa3.91□□□□□ -1.78
COL8A1-204ENST00000462604 GRM4Q14833 912 aa3.91□□□□□ -1.78
COL8A1-204ENST00000462604 NONOQ15233 471 aaKnown RBP eCLIP3.91□□□□□ -1.78
COL8A1-204ENST00000462604 TMEM266Q2M3C6 531 aa3.91□□□□□ -1.78
COL8A1-204ENST00000462604 GLE1Q53GS7 698 aaKnown RBP3.91□□□□□ -1.78
COL8A1-204ENST00000462604 COBLL1Q53SF7 1204 aa3.91□□□□□ -1.78
COL8A1-204ENST00000462604 FAM47AQ5JRC9 791 aa3.91□□□□□ -1.78
COL8A1-204ENST00000462604 ALS2CLQ60I27 953 aa3.91□□□□□ -1.78
COL8A1-204ENST00000462604 SPTY2D1Q68D10 685 aaPredicted RBP3.91□□□□□ -1.78
COL8A1-204ENST00000462604 C8orf74Q6P047 294 aa3.91□□□□□ -1.78
COL8A1-204ENST00000462604 EMBQ6PCB8 327 aa3.91□□□□□ -1.78
COL8A1-204ENST00000462604 WDR59Q6PJI9 974 aa3.91□□□□□ -1.78
COL8A1-204ENST00000462604 MICALCLQ6ZW33 695 aa3.91□□□□□ -1.78
COL8A1-204ENST00000462604 SND1Q7KZF4 910 aaKnown RBP eCLIP3.91□□□□□ -1.78
COL8A1-204ENST00000462604 ADGRA1Q86SQ6 560 aa3.91□□□□□ -1.78
COL8A1-204ENST00000462604 TADA2BQ86TJ2 420 aa3.91□□□□□ -1.78
COL8A1-204ENST00000462604 CCDC84Q86UT8 332 aaPredicted RBP3.91□□□□□ -1.78
COL8A1-204ENST00000462604 DGKHQ86XP1 1220 aa3.91□□□□□ -1.78
COL8A1-204ENST00000462604 SPATS2Q86XZ4 545 aaKnown RBP3.91□□□□□ -1.78
COL8A1-204ENST00000462604 DZIP1Q86YF9 867 aaKnown RBP3.91□□□□□ -1.78
COL8A1-204ENST00000462604 C2CD5Q86YS7 1000 aa3.91□□□□□ -1.78
COL8A1-204ENST00000462604 IRF2BP1Q8IU81 584 aa3.91□□□□□ -1.78
COL8A1-204ENST00000462604 ZSCAN29Q8IWY8 852 aaPredicted RBP3.91□□□□□ -1.78
COL8A1-204ENST00000462604 DDX60Q8IY21 1712 aaKnown RBP3.91□□□□□ -1.78
COL8A1-204ENST00000462604 C4orf32Q8N8J7 132 aa3.91□□□□□ -1.78
COL8A1-204ENST00000462604 PNMA1Q8ND90 353 aa3.91□□□□□ -1.78
COL8A1-204ENST00000462604 AENQ8WTP8 325 aaKnown RBP3.91□□□□□ -1.78
COL8A1-204ENST00000462604 GPKOWQ92917 476 aaPredicted RBP eCLIP3.91□□□□□ -1.78
COL8A1-204ENST00000462604 CAVIN3Q969G5 261 aa3.91□□□□□ -1.78
COL8A1-204ENST00000462604 CALML4Q96GE6 196 aa3.91□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms