RNA–Protein interactions for RNA: ENST00000462306.5

ERCC3-206, Transcript of ERCC excision repair 3, TFIIH core complex helicase subunit, humanhuman

TSL 1 (best)

Gene ERCC3, Length 963 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3-206ENST00000462306 ZNF467Q7Z7K2 595 aaPredicted RBP18.46■□□□□ 0.55
ERCC3-206ENST00000462306 NUP133Q8WUM0 1156 aa18.46■□□□□ 0.55
ERCC3-206ENST00000462306 RIOX1Q9H6W3 641 aa18.46■□□□□ 0.55
ERCC3-206ENST00000462306 CYP39A1Q9NYL5 469 aa18.46■□□□□ 0.55
ERCC3-206ENST00000462306 PFASO15067 1338 aa18.46■□□□□ 0.55
ERCC3-206ENST00000462306 POTEB2H3BUK9 544 aa18.45■□□□□ 0.54
ERCC3-206ENST00000462306 CYTH3O43739 400 aa18.45■□□□□ 0.54
ERCC3-206ENST00000462306 DHX16O60231 1041 aaKnown RBP18.45■□□□□ 0.54
ERCC3-206ENST00000462306 CPA1P15085 419 aa18.45■□□□□ 0.54
ERCC3-206ENST00000462306 CAPN2P17655 700 aa18.45■□□□□ 0.54
ERCC3-206ENST00000462306 PRAMEF19Q5SWL8 479 aa18.45■□□□□ 0.54
ERCC3-206ENST00000462306 LHX8Q68G74 356 aa18.45■□□□□ 0.54
ERCC3-206ENST00000462306 NSMFQ6X4W1 530 aa18.45■□□□□ 0.54
ERCC3-206ENST00000462306 MSL3Q8N5Y2 521 aaKnown RBP18.45■□□□□ 0.54
ERCC3-206ENST00000462306 JAKMIP1Q96N16 626 aaKnown RBP18.45■□□□□ 0.54
ERCC3-206ENST00000462306 SOWAHBA6NEL2 793 aa18.44■□□□□ 0.54
ERCC3-206ENST00000462306 TFRCP02786 760 aaKnown RBP18.44■□□□□ 0.54
ERCC3-206ENST00000462306 USH1GQ495M9 461 aa18.44■□□□□ 0.54
ERCC3-206ENST00000462306 UBE2Q1Q7Z7E8 422 aa18.44■□□□□ 0.54
ERCC3-206ENST00000462306 NRBP1Q9UHY1 535 aa18.44■□□□□ 0.54
ERCC3-206ENST00000462306 SLC12A7Q9Y666 1083 aa18.44■□□□□ 0.54
ERCC3-206ENST00000462306 ASTN1O14525 1302 aa18.44■□□□□ 0.54
ERCC3-206ENST00000462306 SYNGAP1Q96PV0 1343 aa18.44■□□□□ 0.54
ERCC3-206ENST00000462306 ZBTB5O15062 677 aa18.43■□□□□ 0.54
ERCC3-206ENST00000462306 PPP1R11O60927 126 aaPredicted RBP18.43■□□□□ 0.54
ERCC3-206ENST00000462306 SNAI1O95863 264 aaPredicted RBP18.43■□□□□ 0.54
ERCC3-206ENST00000462306 CALM1P0DP23 149 aa18.43■□□□□ 0.54
ERCC3-206ENST00000462306 CALM2P0DP24 149 aa18.43■□□□□ 0.54
ERCC3-206ENST00000462306 CALM3P0DP25 149 aa18.43■□□□□ 0.54
ERCC3-206ENST00000462306 RXRAP19793 462 aa18.43■□□□□ 0.54
ERCC3-206ENST00000462306 KIF5BP33176 963 aa18.43■□□□□ 0.54
ERCC3-206ENST00000462306 BAATQ14032 418 aaPredicted RBP18.43■□□□□ 0.54
ERCC3-206ENST00000462306 FBXO11Q86XK2 927 aa18.43■□□□□ 0.54
ERCC3-206ENST00000462306 CTCFLQ8NI51 663 aaPredicted RBP18.43■□□□□ 0.54
ERCC3-206ENST00000462306 PIGSQ96S52 555 aa18.43■□□□□ 0.54
ERCC3-206ENST00000462306 DDX20Q9UHI6 824 aaKnown RBP18.43■□□□□ 0.54
ERCC3-206ENST00000462306 OGDHLQ9ULD0 1010 aa18.43■□□□□ 0.54
ERCC3-206ENST00000462306 BRPF3Q9ULD4 1205 aa18.43■□□□□ 0.54
ERCC3-206ENST00000462306 ABCB11O95342 1321 aa18.43■□□□□ 0.54
ERCC3-206ENST00000462306 ZNF865P0CJ78 1059 aaPredicted RBP18.42■□□□□ 0.54
ERCC3-206ENST00000462306 CNGA1P29973 690 aa18.42■□□□□ 0.54
ERCC3-206ENST00000462306 APOA5Q6Q788 366 aa18.42■□□□□ 0.54
ERCC3-206ENST00000462306 BLOC1S2Q6QNY1 142 aa18.42■□□□□ 0.54
ERCC3-206ENST00000462306 RAB11FIP4Q86YS3 637 aa18.42■□□□□ 0.54
ERCC3-206ENST00000462306 RGS22Q8NE09 1264 aa18.42■□□□□ 0.54
ERCC3-206ENST00000462306 PURBQ96QR8 312 aaKnown RBP18.42■□□□□ 0.54
ERCC3-206ENST00000462306 SPZ1Q9BXG8 430 aa18.42■□□□□ 0.54
ERCC3-206ENST00000462306 AMNQ9BXJ7 453 aa18.42■□□□□ 0.54
ERCC3-206ENST00000462306 LCTP09848 1927 aa18.41■□□□□ 0.54
ERCC3-206ENST00000462306 PTPDC1A2A3K4 754 aa18.41■□□□□ 0.54
ERCC3-206ENST00000462306 SEPT4O43236 478 aa18.41■□□□□ 0.54
ERCC3-206ENST00000462306 MSCO60682 206 aa18.41■□□□□ 0.54
ERCC3-206ENST00000462306 PLEKHA8P1O95397 391 aa18.41■□□□□ 0.54
ERCC3-206ENST00000462306 RPS6KB1P23443 525 aa18.41■□□□□ 0.54
ERCC3-206ENST00000462306 PSMA5P28066 241 aa18.41■□□□□ 0.54
ERCC3-206ENST00000462306 SMARCA1P28370 1054 aa18.41■□□□□ 0.54
ERCC3-206ENST00000462306 MNX1P50219 401 aaPredicted RBP18.41■□□□□ 0.54
ERCC3-206ENST00000462306 SLC30A10Q6XR72 485 aa18.41■□□□□ 0.54
ERCC3-206ENST00000462306 RNF207Q6ZRF8 634 aa18.41■□□□□ 0.54
ERCC3-206ENST00000462306 ARMCX2Q7L311 632 aa18.41■□□□□ 0.54
ERCC3-206ENST00000462306 HOMER1Q86YM7 354 aa18.41■□□□□ 0.54
ERCC3-206ENST00000462306 CCDC144CPQ8IYA2 1237 aa18.41■□□□□ 0.54
ERCC3-206ENST00000462306 SRBD1Q8N5C6 995 aaKnown RBP18.41■□□□□ 0.54
ERCC3-206ENST00000462306 FANCBQ8NB91 859 aa18.41■□□□□ 0.54
ERCC3-206ENST00000462306 TBC1D5Q92609 795 aa18.41■□□□□ 0.54
ERCC3-206ENST00000462306 CDKN2AIPQ9NXV6 580 aaPredicted RBP18.41■□□□□ 0.54
ERCC3-206ENST00000462306 BAZ2BQ9UIF8 2168 aaKnown RBP18.4■□□□□ 0.54
ERCC3-206ENST00000462306 PNMA6FA0A0J9YX94 578 aa18.4■□□□□ 0.54
ERCC3-206ENST00000462306 FARP2O94887 1054 aaPredicted RBP18.4■□□□□ 0.54
ERCC3-206ENST00000462306 CASTP20810 708 aaKnown RBP18.4■□□□□ 0.54
ERCC3-206ENST00000462306 GNAQP50148 359 aa18.4■□□□□ 0.54
ERCC3-206ENST00000462306 RPS6P62753 249 aaKnown RBP18.4■□□□□ 0.54
ERCC3-206ENST00000462306 MICU3Q86XE3 530 aa18.4■□□□□ 0.54
ERCC3-206ENST00000462306 FBXL16Q8N461 479 aa18.4■□□□□ 0.54
ERCC3-206ENST00000462306 ANKLE1Q8NAG6 615 aa18.4■□□□□ 0.54
ERCC3-206ENST00000462306 LZTS2Q9BRK4 669 aa18.4■□□□□ 0.54
ERCC3-206ENST00000462306 AGXT2Q9BYV1 514 aa18.4■□□□□ 0.54
ERCC3-206ENST00000462306 MAF1Q9H063 256 aa18.4■□□□□ 0.54
ERCC3-206ENST00000462306 ZSWIM6Q9HCJ5 1215 aa18.4■□□□□ 0.54
ERCC3-206ENST00000462306 CNPY2Q9Y2B0 182 aa18.4■□□□□ 0.54
ERCC3-206ENST00000462306 MRPL11Q9Y3B7 192 aaKnown RBP18.4■□□□□ 0.54
ERCC3-206ENST00000462306 ASB14A6NK59 587 aa18.39■□□□□ 0.53
ERCC3-206ENST00000462306 OPLAHO14841 1288 aa18.39■□□□□ 0.53
ERCC3-206ENST00000462306 CALML3P27482 149 aa18.39■□□□□ 0.53
ERCC3-206ENST00000462306 SYNE3Q6ZMZ3 975 aa18.39■□□□□ 0.53
ERCC3-206ENST00000462306 Q6ZUG5 572 aa18.39■□□□□ 0.53
ERCC3-206ENST00000462306 CMTR1Q8N1G2 835 aaKnown RBP18.39■□□□□ 0.53
ERCC3-206ENST00000462306 MORC4Q8TE76 937 aa18.39■□□□□ 0.53
ERCC3-206ENST00000462306 TM6SF1Q9BZW5 370 aa18.39■□□□□ 0.53
ERCC3-206ENST00000462306 KATNBL1Q9H079 304 aa18.39■□□□□ 0.53
ERCC3-206ENST00000462306 ABHD16BQ9H3Z7 469 aa18.39■□□□□ 0.53
ERCC3-206ENST00000462306 PCDHA1Q9Y5I3 950 aa18.39■□□□□ 0.53
ERCC3-206ENST00000462306 DDX49Q9Y6V7 483 aaKnown RBP18.39■□□□□ 0.53
ERCC3-206ENST00000462306 MYH6P13533 1939 aa18.39■□□□□ 0.53
ERCC3-206ENST00000462306 MKI67P46013 3256 aaKnown RBP18.38■□□□□ 0.53
ERCC3-206ENST00000462306 FRMPD3Q5JV73 1810 aa18.38■□□□□ 0.53
ERCC3-206ENST00000462306 KLF18A0A0U1RQI7 1052 aa18.38■□□□□ 0.53
ERCC3-206ENST00000462306 ZBTB43O43298 467 aa18.38■□□□□ 0.53
ERCC3-206ENST00000462306 SEC24BO95487 1268 aa18.38■□□□□ 0.53
ERCC3-206ENST00000462306 ACVR2BQ13705 512 aa18.38■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 67.3 ms