RNA–Protein interactions for RNA: ENST00000462181.1

CALD1-213, Transcript of caldesmon 1, humanhuman

TSL 5

Gene CALD1, Length 188 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-213ENST00000462181 SNRPB2P08579 225 aaKnown RBP8.44□□□□□ -1.06
CALD1-213ENST00000462181 PAMP19021 973 aa8.44□□□□□ -1.06
CALD1-213ENST00000462181 PPP2R2AP63151 447 aa8.44□□□□□ -1.06
CALD1-213ENST00000462181 MTERF2Q49AM1 385 aa8.44□□□□□ -1.06
CALD1-213ENST00000462181 HSF5Q4G112 596 aaPredicted RBP8.44□□□□□ -1.06
CALD1-213ENST00000462181 MPZL3Q6UWV2 235 aa8.44□□□□□ -1.06
CALD1-213ENST00000462181 SLCO6A1Q86UG4 719 aa8.44□□□□□ -1.06
CALD1-213ENST00000462181 CCDC140Q96MF4 163 aa8.44□□□□□ -1.06
CALD1-213ENST00000462181 SRPK1Q96SB4 655 aaKnown RBP8.44□□□□□ -1.06
CALD1-213ENST00000462181 RNF32Q9H0A6 362 aa8.44□□□□□ -1.06
CALD1-213ENST00000462181 CARMIL2Q6F5E8 1435 aa8.44□□□□□ -1.06
CALD1-213ENST00000462181 NOTOA8MTQ0 251 aa8.43□□□□□ -1.06
CALD1-213ENST00000462181 KCNJ6P48051 423 aa8.43□□□□□ -1.06
CALD1-213ENST00000462181 IFRD2Q12894 506 aaPredicted RBP8.43□□□□□ -1.06
CALD1-213ENST00000462181 HSP90AA2PQ14568 343 aaPredicted RBP8.43□□□□□ -1.06
CALD1-213ENST00000462181 LRP10Q7Z4F1 713 aa8.43□□□□□ -1.06
CALD1-213ENST00000462181 SIRT2Q8IXJ6 389 aa8.43□□□□□ -1.06
CALD1-213ENST00000462181 LRRC47Q8N1G4 583 aaKnown RBP8.43□□□□□ -1.06
CALD1-213ENST00000462181 COPS5Q92905 334 aa8.43□□□□□ -1.06
CALD1-213ENST00000462181 MKL1Q969V6 931 aa8.43□□□□□ -1.06
CALD1-213ENST00000462181 ZNF669Q96BR6 464 aaPredicted RBP8.43□□□□□ -1.06
CALD1-213ENST00000462181 DEPDC7Q96QD5 511 aa8.43□□□□□ -1.06
CALD1-213ENST00000462181 JMJD8Q96S16 334 aa8.43□□□□□ -1.06
CALD1-213ENST00000462181 GPRC5CQ9NQ84 441 aa8.43□□□□□ -1.06
CALD1-213ENST00000462181 TRBV23OR9-2A0A075B6M9 112 aa8.42□□□□□ -1.06
CALD1-213ENST00000462181 NPHP3-ACAD11A0A0J9YXS1 232 aa8.42□□□□□ -1.06
CALD1-213ENST00000462181 PAX4O43316 350 aa8.42□□□□□ -1.06
CALD1-213ENST00000462181 ECI1P42126 302 aa8.42□□□□□ -1.06
CALD1-213ENST00000462181 CEBPAP49715 358 aaPredicted RBP8.42□□□□□ -1.06
CALD1-213ENST00000462181 LAPTM5Q13571 262 aa8.42□□□□□ -1.06
CALD1-213ENST00000462181 NLRX1Q86UT6 975 aa8.42□□□□□ -1.06
CALD1-213ENST00000462181 PLCD4Q9BRC7 762 aa8.42□□□□□ -1.06
CALD1-213ENST00000462181 OSBPL2Q9H1P3 480 aa8.42□□□□□ -1.06
CALD1-213ENST00000462181 FAM53CQ9NYF3 392 aa8.42□□□□□ -1.06
CALD1-213ENST00000462181 ZNF503-AS2A6NEH8 195 aa8.41□□□□□ -1.06
CALD1-213ENST00000462181 CPP00450 1065 aa8.41□□□□□ -1.06
CALD1-213ENST00000462181 THBDP07204 575 aa8.41□□□□□ -1.06
CALD1-213ENST00000462181 L1CAMP32004 1257 aa8.41□□□□□ -1.06
CALD1-213ENST00000462181 GALK1P51570 392 aa8.41□□□□□ -1.06
CALD1-213ENST00000462181 RASA3Q14644 834 aa8.41□□□□□ -1.06
CALD1-213ENST00000462181 SPATC1Q76KD6 591 aa8.41□□□□□ -1.06
CALD1-213ENST00000462181 CPNE8Q86YQ8 564 aa8.41□□□□□ -1.06
CALD1-213ENST00000462181 NUP43Q8NFH3 380 aa8.41□□□□□ -1.06
CALD1-213ENST00000462181 SHISA4Q96DD7 197 aa8.41□□□□□ -1.06
CALD1-213ENST00000462181 LIN37Q96GY3 246 aaPredicted RBP8.41□□□□□ -1.06
CALD1-213ENST00000462181 SLC6A17Q9H1V8 727 aa8.41□□□□□ -1.06
CALD1-213ENST00000462181 SNTG2Q9NY99 539 aa8.41□□□□□ -1.06
CALD1-213ENST00000462181 CLEC1BQ9P126 229 aa8.41□□□□□ -1.06
CALD1-213ENST00000462181 PFDN2Q9UHV9 154 aa8.41□□□□□ -1.06
CALD1-213ENST00000462181 YBX2Q9Y2T7 364 aaKnown RBP8.41□□□□□ -1.06
CALD1-213ENST00000462181 FAM221BA6H8Z2 402 aa8.4□□□□□ -1.06
CALD1-213ENST00000462181 PLS3P13797 630 aa8.4□□□□□ -1.06
CALD1-213ENST00000462181 PRKCAP17252 672 aa8.4□□□□□ -1.06
CALD1-213ENST00000462181 GRIA2P42262 883 aa8.4□□□□□ -1.06
CALD1-213ENST00000462181 SSRP1Q08945 709 aaKnown RBP8.4□□□□□ -1.06
CALD1-213ENST00000462181 SF1Q15637 639 aaKnown RBP8.4□□□□□ -1.06
CALD1-213ENST00000462181 AARSD1Q9BTE6 412 aaKnown RBP8.4□□□□□ -1.06
CALD1-213ENST00000462181 SPATA9Q9BWV2 254 aa8.4□□□□□ -1.06
CALD1-213ENST00000462181 CRTAC1Q9NQ79 661 aa8.4□□□□□ -1.06
CALD1-213ENST00000462181 IMPACTQ9P2X3 320 aa8.4□□□□□ -1.06
CALD1-213ENST00000462181 ACSL6Q9UKU0 697 aa8.4□□□□□ -1.06
CALD1-213ENST00000462181 RNF114Q9Y508 228 aa8.4□□□□□ -1.06
CALD1-213ENST00000462181 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP8.4□□□□□ -1.06
CALD1-213ENST00000462181 A0A1W2PQJ5 194 aa8.39□□□□□ -1.07
CALD1-213ENST00000462181 EFEMP2O95967 443 aa8.39□□□□□ -1.07
CALD1-213ENST00000462181 SCG5P05408 212 aa8.39□□□□□ -1.07
CALD1-213ENST00000462181 PNLIPP16233 465 aa8.39□□□□□ -1.07
CALD1-213ENST00000462181 ARL4AP40617 200 aa8.39□□□□□ -1.07
CALD1-213ENST00000462181 GFRA1P56159 465 aa8.39□□□□□ -1.07
CALD1-213ENST00000462181 CYP4F8P98187 520 aa8.39□□□□□ -1.07
CALD1-213ENST00000462181 KIR3DS1Q14943 382 aa8.39□□□□□ -1.07
CALD1-213ENST00000462181 NFE2L2Q16236 605 aa8.39□□□□□ -1.07
CALD1-213ENST00000462181 FRS2Q8WU20 508 aa8.39□□□□□ -1.07
CALD1-213ENST00000462181 INTS4Q96HW7 963 aaKnown RBP8.39□□□□□ -1.07
CALD1-213ENST00000462181 MMP19Q99542 508 aa8.39□□□□□ -1.07
CALD1-213ENST00000462181 IER2Q9BTL4 223 aa8.39□□□□□ -1.07
CALD1-213ENST00000462181 USP35Q9P2H5 1018 aa8.39□□□□□ -1.07
CALD1-213ENST00000462181 LRRC10BA6NIK2 292 aa8.38□□□□□ -1.07
CALD1-213ENST00000462181 CAPNS1P04632 268 aa8.38□□□□□ -1.07
CALD1-213ENST00000462181 PDE6BP35913 854 aa8.38□□□□□ -1.07
CALD1-213ENST00000462181 MLANAQ16655 118 aa8.38□□□□□ -1.07
CALD1-213ENST00000462181 IQCEQ6IPM2 695 aa8.38□□□□□ -1.07
CALD1-213ENST00000462181 KCTD13Q8WZ19 329 aa8.38□□□□□ -1.07
CALD1-213ENST00000462181 LNPKQ9C0E8 428 aa8.38□□□□□ -1.07
CALD1-213ENST00000462181 ZSWIM4Q9H7M6 989 aa8.38□□□□□ -1.07
CALD1-213ENST00000462181 KDM2BQ8NHM5 1336 aa8.37□□□□□ -1.07
CALD1-213ENST00000462181 TRAV20A0A0B4J274 112 aa8.37□□□□□ -1.07
CALD1-213ENST00000462181 IQCJ-SCHIP1C9J366 451 aaPredicted RBP8.37□□□□□ -1.07
CALD1-213ENST00000462181 NPHS1O60500 1241 aa8.37□□□□□ -1.07
CALD1-213ENST00000462181 CYP4F3Q08477 520 aa8.37□□□□□ -1.07
CALD1-213ENST00000462181 BMS1Q14692 1282 aaKnown RBP8.37□□□□□ -1.07
CALD1-213ENST00000462181 PRSS53Q2L4Q9 553 aa8.37□□□□□ -1.07
CALD1-213ENST00000462181 TMEM145Q8NBT3 493 aa8.37□□□□□ -1.07
CALD1-213ENST00000462181 NLGN2Q8NFZ4 835 aa8.37□□□□□ -1.07
CALD1-213ENST00000462181 NPLOC4Q8TAT6 608 aa8.37□□□□□ -1.07
CALD1-213ENST00000462181 ARHGEF4Q9NR80 690 aa8.37□□□□□ -1.07
CALD1-213ENST00000462181 CDK11AQ9UQ88 783 aaPredicted RBP8.37□□□□□ -1.07
CALD1-213ENST00000462181 MEFVO15553 781 aaPredicted RBP8.36□□□□□ -1.07
CALD1-213ENST00000462181 PRODHO43272 600 aa8.36□□□□□ -1.07
CALD1-213ENST00000462181 DIAPH1O60610 1272 aaKnown RBP8.36□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms