RNA–Protein interactions for RNA: ENST00000461343.1

LSG1-205, Transcript of large 60S subunit nuclear export GTPase 1, humanhuman

TSL 2

Gene LSG1, Length 428 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSG1-205ENST00000461343 USP17L22D6RA61 530 aa8.47□□□□□ -1.05
LSG1-205ENST00000461343 USP17L17D6RBQ6 530 aa8.47□□□□□ -1.05
LSG1-205ENST00000461343 USP17L19D6RCP7 530 aa8.47□□□□□ -1.05
LSG1-205ENST00000461343 USP17L20D6RJB6 530 aa8.47□□□□□ -1.05
LSG1-205ENST00000461343 GCOM1H8Y6P7 765 aaPredicted RBP8.47□□□□□ -1.05
LSG1-205ENST00000461343 M0R2N6 131 aa8.47□□□□□ -1.05
LSG1-205ENST00000461343 CXCL11O14625 94 aa8.47□□□□□ -1.05
LSG1-205ENST00000461343 TBX3O15119 743 aa8.47□□□□□ -1.05
LSG1-205ENST00000461343 GADD45BO75293 160 aaPredicted RBP8.47□□□□□ -1.05
LSG1-205ENST00000461343 ICAM1P05362 532 aa8.47□□□□□ -1.05
LSG1-205ENST00000461343 POLR2MP0CAP2 368 aa8.47□□□□□ -1.05
LSG1-205ENST00000461343 PTPRAP18433 802 aa8.47□□□□□ -1.05
LSG1-205ENST00000461343 PRELPP51888 382 aa8.47□□□□□ -1.05
LSG1-205ENST00000461343 PPATQ06203 517 aa8.47□□□□□ -1.05
LSG1-205ENST00000461343 USP17L24Q0WX57 530 aa8.47□□□□□ -1.05
LSG1-205ENST00000461343 FAM83BQ5T0W9 1011 aa8.47□□□□□ -1.05
LSG1-205ENST00000461343 NBPF12Q5TAG4 269 aaPredicted RBP8.47□□□□□ -1.05
LSG1-205ENST00000461343 XRRA1Q6P2D8 792 aa8.47□□□□□ -1.05
LSG1-205ENST00000461343 FASTKD5Q7L8L6 764 aaKnown RBP8.47□□□□□ -1.05
LSG1-205ENST00000461343 ERO1BQ86YB8 467 aa8.47□□□□□ -1.05
LSG1-205ENST00000461343 SIAH1Q8IUQ4 282 aa8.47□□□□□ -1.05
LSG1-205ENST00000461343 IQUBQ8NA54 791 aa8.47□□□□□ -1.05
LSG1-205ENST00000461343 KIFC2Q96AC6 838 aa8.47□□□□□ -1.05
LSG1-205ENST00000461343 MPHOSPH6Q99547 160 aaKnown RBP8.47□□□□□ -1.05
LSG1-205ENST00000461343 TANGO6Q9C0B7 1094 aa8.47□□□□□ -1.05
LSG1-205ENST00000461343 ANO10Q9NW15 660 aa8.47□□□□□ -1.05
LSG1-205ENST00000461343 KCNH3Q9ULD8 1083 aa8.47□□□□□ -1.05
LSG1-205ENST00000461343 ATAD5Q96QE3 1844 aa8.46□□□□□ -1.06
LSG1-205ENST00000461343 hCG_1642624A0A1W2PR95 340 aa8.46□□□□□ -1.06
LSG1-205ENST00000461343 SYCE3A1L190 88 aa8.46□□□□□ -1.06
LSG1-205ENST00000461343 CCNT1O60563 726 aaKnown RBP8.46□□□□□ -1.06
LSG1-205ENST00000461343 FLOT1O75955 427 aa8.46□□□□□ -1.06
LSG1-205ENST00000461343 OR52Z1P0C646 297 aa8.46□□□□□ -1.06
LSG1-205ENST00000461343 VEGFAP15692 232 aaPredicted RBP8.46□□□□□ -1.06
LSG1-205ENST00000461343 PFKFB1P16118 471 aa8.46□□□□□ -1.06
LSG1-205ENST00000461343 MCM7P33993 719 aa8.46□□□□□ -1.06
LSG1-205ENST00000461343 UBA7P41226 1012 aa8.46□□□□□ -1.06
LSG1-205ENST00000461343 TOB1P50616 345 aaPredicted RBP8.46□□□□□ -1.06
LSG1-205ENST00000461343 SETQ01105 290 aaPredicted RBP8.46□□□□□ -1.06
LSG1-205ENST00000461343 AMPD3Q01432 767 aa8.46□□□□□ -1.06
LSG1-205ENST00000461343 PTGDRQ13258 359 aa8.46□□□□□ -1.06
LSG1-205ENST00000461343 PDIA5Q14554 519 aa8.46□□□□□ -1.06
LSG1-205ENST00000461343 NPY5RQ15761 445 aa8.46□□□□□ -1.06
LSG1-205ENST00000461343 CALCRLQ16602 461 aa8.46□□□□□ -1.06
LSG1-205ENST00000461343 STX1AQ16623 288 aa8.46□□□□□ -1.06
LSG1-205ENST00000461343 SH3D19Q5HYK7 790 aa8.46□□□□□ -1.06
LSG1-205ENST00000461343 RBM43Q6ZSC3 357 aaKnown RBP8.46□□□□□ -1.06
LSG1-205ENST00000461343 FMR1NBQ8N0W7 255 aaPredicted RBP8.46□□□□□ -1.06
LSG1-205ENST00000461343 TRIML1Q8N9V2 468 aa8.46□□□□□ -1.06
LSG1-205ENST00000461343 PROCA1Q8NCQ7 364 aaPredicted RBP8.46□□□□□ -1.06
LSG1-205ENST00000461343 CNNM3Q8NE01 707 aa8.46□□□□□ -1.06
LSG1-205ENST00000461343 RASSF8Q8NHQ8 419 aa8.46□□□□□ -1.06
LSG1-205ENST00000461343 DDX55Q8NHQ9 600 aaKnown RBP eCLIP8.46□□□□□ -1.06
LSG1-205ENST00000461343 ERMNQ8TAM6 284 aa8.46□□□□□ -1.06
LSG1-205ENST00000461343 OXER1Q8TDS5 423 aa8.46□□□□□ -1.06
LSG1-205ENST00000461343 TBCKQ8TEA7 893 aa8.46□□□□□ -1.06
LSG1-205ENST00000461343 PGBD1Q96JS3 809 aa8.46□□□□□ -1.06
LSG1-205ENST00000461343 TAF1DQ9H5J8 278 aaPredicted RBP8.46□□□□□ -1.06
LSG1-205ENST00000461343 RMND1Q9NWS8 449 aa8.46□□□□□ -1.06
LSG1-205ENST00000461343 TMEM63CQ9P1W3 806 aa8.46□□□□□ -1.06
LSG1-205ENST00000461343 FBXO40Q9UH90 709 aa8.46□□□□□ -1.06
LSG1-205ENST00000461343 TCEAL9Q9UHQ7 104 aa8.46□□□□□ -1.06
LSG1-205ENST00000461343 FBXO2Q9UK22 296 aaPredicted RBP8.46□□□□□ -1.06
LSG1-205ENST00000461343 PPP1R9AQ9ULJ8 1098 aa8.46□□□□□ -1.06
LSG1-205ENST00000461343 ZHX2Q9Y6X8 837 aa8.46□□□□□ -1.06
LSG1-205ENST00000461343 BAZ2BQ9UIF8 2168 aaKnown RBP8.46□□□□□ -1.06
LSG1-205ENST00000461343 KDM3AQ9Y4C1 1321 aa8.46□□□□□ -1.06
LSG1-205ENST00000461343 WDR90Q96KV7 1748 aa8.46□□□□□ -1.06
LSG1-205ENST00000461343 A0A1W2PRG0 241 aa8.45□□□□□ -1.06
LSG1-205ENST00000461343 FSD2A1L4K1 749 aa8.45□□□□□ -1.06
LSG1-205ENST00000461343 ATP2A1O14983 1001 aa8.45□□□□□ -1.06
LSG1-205ENST00000461343 NR1I2O75469 434 aa8.45□□□□□ -1.06
LSG1-205ENST00000461343 CAPN15O75808 1086 aa8.45□□□□□ -1.06
LSG1-205ENST00000461343 ZNF202O95125 648 aa8.45□□□□□ -1.06
LSG1-205ENST00000461343 EGFRP00533 1210 aa8.45□□□□□ -1.06
LSG1-205ENST00000461343 VCAM1P19320 739 aa8.45□□□□□ -1.06
LSG1-205ENST00000461343 ATP2B1P20020 1258 aa8.45□□□□□ -1.06
LSG1-205ENST00000461343 MARCKSP29966 332 aaPredicted RBP8.45□□□□□ -1.06
LSG1-205ENST00000461343 SLC16A2P36021 539 aa8.45□□□□□ -1.06
LSG1-205ENST00000461343 PPP1R2P41236 205 aa8.45□□□□□ -1.06
LSG1-205ENST00000461343 ECE1P42892 770 aa8.45□□□□□ -1.06
LSG1-205ENST00000461343 CLK2P49760 499 aaKnown RBP8.45□□□□□ -1.06
LSG1-205ENST00000461343 FXR2P51116 673 aaKnown RBP eCLIP8.45□□□□□ -1.06
LSG1-205ENST00000461343 SPP2Q13103 211 aa8.45□□□□□ -1.06
LSG1-205ENST00000461343 MTMR2Q13614 643 aa8.45□□□□□ -1.06
LSG1-205ENST00000461343 TTLL12Q14166 644 aaPredicted RBP8.45□□□□□ -1.06
LSG1-205ENST00000461343 DHX8Q14562 1220 aaKnown RBP8.45□□□□□ -1.06
LSG1-205ENST00000461343 COG2Q14746 738 aa8.45□□□□□ -1.06
LSG1-205ENST00000461343 INF2Q27J81 1249 aa8.45□□□□□ -1.06
LSG1-205ENST00000461343 LETM2Q2VYF4 491 aa8.45□□□□□ -1.06
LSG1-205ENST00000461343 AXDND1Q5T1B0 1012 aaPredicted RBP8.45□□□□□ -1.06
LSG1-205ENST00000461343 HAUS3Q68CZ6 603 aa8.45□□□□□ -1.06
LSG1-205ENST00000461343 TTBK2Q6IQ55 1244 aa8.45□□□□□ -1.06
LSG1-205ENST00000461343 LDHDQ86WU2 507 aa8.45□□□□□ -1.06
LSG1-205ENST00000461343 CLEC10AQ8IUN9 316 aa8.45□□□□□ -1.06
LSG1-205ENST00000461343 SPICE1Q8N0Z3 855 aa8.45□□□□□ -1.06
LSG1-205ENST00000461343 ACER1Q8TDN7 264 aa8.45□□□□□ -1.06
LSG1-205ENST00000461343 CALML4Q96GE6 196 aa8.45□□□□□ -1.06
LSG1-205ENST00000461343 FAM20AQ96MK3 541 aa8.45□□□□□ -1.06
LSG1-205ENST00000461343 NT5C3AQ9H0P0 336 aa8.45□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms