RNA–Protein interactions for RNA: ENST00000461326.1

CLK1-206, Transcript of CDC like kinase 1, humanhuman

TSL 2

Gene CLK1, Length 435 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-206ENST00000461326 NOTOA8MTQ0 251 aa5.64□□□□□ -1.51
CLK1-206ENST00000461326 INSRRP14616 1297 aa5.64□□□□□ -1.51
CLK1-206ENST00000461326 RAG1P15918 1043 aa5.64□□□□□ -1.51
CLK1-206ENST00000461326 PNLIPP16233 465 aa5.64□□□□□ -1.51
CLK1-206ENST00000461326 CDR1P51861 262 aa5.64□□□□□ -1.51
CLK1-206ENST00000461326 YBX1P67809 324 aaKnown RBP5.64□□□□□ -1.51
CLK1-206ENST00000461326 RASGRF1Q13972 1273 aa5.64□□□□□ -1.51
CLK1-206ENST00000461326 PUM1Q14671 1186 aaKnown RBP eCLIP5.64□□□□□ -1.51
CLK1-206ENST00000461326 NCAPHQ15003 741 aa5.64□□□□□ -1.51
CLK1-206ENST00000461326 PPP2R5EQ16537 467 aa5.64□□□□□ -1.51
CLK1-206ENST00000461326 BBS9Q3SYG4 887 aa5.64□□□□□ -1.51
CLK1-206ENST00000461326 CEP128Q6ZU80 1094 aa5.64□□□□□ -1.51
CLK1-206ENST00000461326 TMEFF1Q8IYR6 380 aa5.64□□□□□ -1.51
CLK1-206ENST00000461326 FAM177A1Q8N128 213 aaPredicted RBP5.64□□□□□ -1.51
CLK1-206ENST00000461326 ATG4CQ96DT6 458 aa5.64□□□□□ -1.51
CLK1-206ENST00000461326 GPR20Q99678 358 aa5.64□□□□□ -1.51
CLK1-206ENST00000461326 PIF1Q9H611 641 aa5.64□□□□□ -1.51
CLK1-206ENST00000461326 SNTG2Q9NY99 539 aa5.64□□□□□ -1.51
CLK1-206ENST00000461326 KLHL3Q9UH77 587 aa5.64□□□□□ -1.51
CLK1-206ENST00000461326 ZNF281Q9Y2X9 895 aa5.64□□□□□ -1.51
CLK1-206ENST00000461326 TBX22Q9Y458 520 aa5.64□□□□□ -1.51
CLK1-206ENST00000461326 CADPSQ9ULU8 1353 aa5.64□□□□□ -1.51
CLK1-206ENST00000461326 CHMP4BP1P59074 171 aa5.63□□□□□ -1.51
CLK1-206ENST00000461326 TMEM62Q0P6H9 643 aa5.63□□□□□ -1.51
CLK1-206ENST00000461326 IFRD2Q12894 506 aaPredicted RBP5.63□□□□□ -1.51
CLK1-206ENST00000461326 LARP1BQ659C4 914 aaKnown RBP5.63□□□□□ -1.51
CLK1-206ENST00000461326 WAPLQ7Z5K2 1190 aa5.63□□□□□ -1.51
CLK1-206ENST00000461326 ENOX1Q8TC92 643 aaKnown RBP5.63□□□□□ -1.51
CLK1-206ENST00000461326 MAP6Q96JE9 813 aa5.63□□□□□ -1.51
CLK1-206ENST00000461326 DHRS1Q96LJ7 313 aa5.63□□□□□ -1.51
CLK1-206ENST00000461326 KREMEN1Q96MU8 473 aa5.63□□□□□ -1.51
CLK1-206ENST00000461326 KRTAP9-8Q9BYQ0 159 aa5.63□□□□□ -1.51
CLK1-206ENST00000461326 CNOT11Q9UKZ1 510 aaKnown RBP5.63□□□□□ -1.51
CLK1-206ENST00000461326 SSU72P8A0A1W2PR75 194 aa5.62□□□□□ -1.51
CLK1-206ENST00000461326 SHISA3A0PJX4 238 aa5.62□□□□□ -1.51
CLK1-206ENST00000461326 PDPK1O15530 556 aa5.62□□□□□ -1.51
CLK1-206ENST00000461326 MPOP05164 745 aa5.62□□□□□ -1.51
CLK1-206ENST00000461326 NAT2P11245 290 aa5.62□□□□□ -1.51
CLK1-206ENST00000461326 ERVFRD-1P60508 538 aa5.62□□□□□ -1.51
CLK1-206ENST00000461326 ARSHQ5FYA8 562 aa5.62□□□□□ -1.51
CLK1-206ENST00000461326 ST13P5Q8NFI4 369 aaPredicted RBP5.62□□□□□ -1.51
CLK1-206ENST00000461326 SMARCC1Q92922 1105 aaPredicted RBP5.62□□□□□ -1.51
CLK1-206ENST00000461326 PWWP2AQ96N64 755 aa5.62□□□□□ -1.51
CLK1-206ENST00000461326 EPN3Q9H201 632 aa5.62□□□□□ -1.51
CLK1-206ENST00000461326 ANTXR1Q9H6X2 564 aa5.62□□□□□ -1.51
CLK1-206ENST00000461326 UPK3BL1B0FP48 263 aa5.61□□□□□ -1.51
CLK1-206ENST00000461326 UPK3BL2E5RIL1 263 aa5.61□□□□□ -1.51
CLK1-206ENST00000461326 RGS13O14921 159 aa5.61□□□□□ -1.51
CLK1-206ENST00000461326 DNAJA2O60884 412 aa5.61□□□□□ -1.51
CLK1-206ENST00000461326 CLSTN1O94985 981 aa5.61□□□□□ -1.51
CLK1-206ENST00000461326 ACRP10323 421 aa5.61□□□□□ -1.51
CLK1-206ENST00000461326 ARL4AP40617 200 aa5.61□□□□□ -1.51
CLK1-206ENST00000461326 KCNC1P48547 511 aa5.61□□□□□ -1.51
CLK1-206ENST00000461326 ZNF143P52747 638 aaPredicted RBP5.61□□□□□ -1.51
CLK1-206ENST00000461326 SDE2Q6IQ49 451 aa5.61□□□□□ -1.51
CLK1-206ENST00000461326 UNC5AQ6ZN44 842 aa5.61□□□□□ -1.51
CLK1-206ENST00000461326 RUFY4Q6ZNE9 571 aa5.61□□□□□ -1.51
CLK1-206ENST00000461326 EEPD1Q7L9B9 569 aa5.61□□□□□ -1.51
CLK1-206ENST00000461326 PHACTR4Q8IZ21 702 aa5.61□□□□□ -1.51
CLK1-206ENST00000461326 CELF2-AS1Q8N7Q2 184 aa5.61□□□□□ -1.51
CLK1-206ENST00000461326 CCDC74BQ96LY2 380 aa5.61□□□□□ -1.51
CLK1-206ENST00000461326 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP5.61□□□□□ -1.51
CLK1-206ENST00000461326 ENPP3O14638 875 aa5.6□□□□□ -1.51
CLK1-206ENST00000461326 DDAH1O94760 285 aa5.6□□□□□ -1.51
CLK1-206ENST00000461326 GJB6O95452 261 aa5.6□□□□□ -1.51
CLK1-206ENST00000461326 EFEMP2O95967 443 aa5.6□□□□□ -1.51
CLK1-206ENST00000461326 NCLP19338 710 aaKnown RBP5.6□□□□□ -1.51
CLK1-206ENST00000461326 SDHBP21912 280 aa5.6□□□□□ -1.51
CLK1-206ENST00000461326 PCBP3P57721 371 aaKnown RBP5.6□□□□□ -1.51
CLK1-206ENST00000461326 NMIQ13287 307 aaPredicted RBP5.6□□□□□ -1.51
CLK1-206ENST00000461326 RTP5Q14D33 572 aa5.6□□□□□ -1.51
CLK1-206ENST00000461326 ZNF827Q17R98 1081 aa5.6□□□□□ -1.51
CLK1-206ENST00000461326 VHLLQ6RSH7 139 aa5.6□□□□□ -1.51
CLK1-206ENST00000461326 HHIPL2Q6UWX4 724 aa5.6□□□□□ -1.51
CLK1-206ENST00000461326 TMC6Q7Z403 805 aa5.6□□□□□ -1.51
CLK1-206ENST00000461326 LDHDQ86WU2 507 aa5.6□□□□□ -1.51
CLK1-206ENST00000461326 IGDCC3Q8IVU1 814 aa5.6□□□□□ -1.51
CLK1-206ENST00000461326 FAM178BQ8IXR5 827 aa5.6□□□□□ -1.51
CLK1-206ENST00000461326 SYTL5Q8TDW5 730 aaPredicted RBP5.6□□□□□ -1.51
CLK1-206ENST00000461326 SLC9A7Q96T83 725 aa5.6□□□□□ -1.51
CLK1-206ENST00000461326 TMX1Q9H3N1 280 aa5.6□□□□□ -1.51
CLK1-206ENST00000461326 ZNF214Q9UL59 606 aaPredicted RBP5.6□□□□□ -1.51
CLK1-206ENST00000461326 CHURC1-FNTBB4DL54 471 aa5.59□□□□□ -1.51
CLK1-206ENST00000461326 K7ESM1 405 aa5.59□□□□□ -1.51
CLK1-206ENST00000461326 HSD3B2P26439 372 aa5.59□□□□□ -1.51
CLK1-206ENST00000461326 GBP1P32455 592 aa5.59□□□□□ -1.51
CLK1-206ENST00000461326 PMS1P54277 932 aaKnown RBP5.59□□□□□ -1.51
CLK1-206ENST00000461326 SLC7A5Q01650 507 aa5.59□□□□□ -1.51
CLK1-206ENST00000461326 MTERF2Q49AM1 385 aa5.59□□□□□ -1.51
CLK1-206ENST00000461326 GALNT18Q6P9A2 607 aa5.59□□□□□ -1.51
CLK1-206ENST00000461326 C6orf15Q6UXA7 325 aaPredicted RBP5.59□□□□□ -1.51
CLK1-206ENST00000461326 JAZF1Q86VZ6 243 aa5.59□□□□□ -1.51
CLK1-206ENST00000461326 NLGN1Q8N2Q7 840 aa5.59□□□□□ -1.51
CLK1-206ENST00000461326 USHBP1Q8N6Y0 703 aa5.59□□□□□ -1.51
CLK1-206ENST00000461326 FOXP3Q9BZS1 431 aa5.59□□□□□ -1.51
CLK1-206ENST00000461326 IQCA1LA6NCM1 817 aa5.58□□□□□ -1.52
CLK1-206ENST00000461326 CCDC85CA6NKD9 419 aa5.58□□□□□ -1.52
CLK1-206ENST00000461326 CLEC3AO75596 197 aa5.58□□□□□ -1.52
CLK1-206ENST00000461326 HMGB1P09429 215 aaKnown RBP5.58□□□□□ -1.52
CLK1-206ENST00000461326 RTP1P59025 263 aa5.58□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 114.3 ms