RNA–Protein interactions for RNA: ENST00000461074.1

MCF2L2-205, Transcript of MCF.2 cell line derived transforming sequence-like 2, humanhuman

TSL 1 (best)

Gene MCF2L2, Length 7,666 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L2-205ENST00000461074 KRT3P12035 628 aa9.25□□□□□ -0.93
MCF2L2-205ENST00000461074 RXRAP19793 462 aa9.25□□□□□ -0.93
MCF2L2-205ENST00000461074 KCNJ12Q14500 433 aa9.25□□□□□ -0.93
MCF2L2-205ENST00000461074 CEP85LQ5SZL2 805 aa9.25□□□□□ -0.93
MCF2L2-205ENST00000461074 SPATA1Q5VX52 437 aa9.25□□□□□ -0.93
MCF2L2-205ENST00000461074 SLFN13Q68D06 897 aa9.25□□□□□ -0.93
MCF2L2-205ENST00000461074 EFCAB13Q8IY85 973 aa9.25□□□□□ -0.93
MCF2L2-205ENST00000461074 CCDC68Q9H2F9 335 aa9.25□□□□□ -0.93
MCF2L2-205ENST00000461074 MID2Q9UJV3 735 aa9.25□□□□□ -0.93
MCF2L2-205ENST00000461074 CAPN9O14815 690 aa9.25□□□□□ -0.93
MCF2L2-205ENST00000461074 FDX1P10109 184 aa9.25□□□□□ -0.93
MCF2L2-205ENST00000461074 ADRA2BP18089 450 aa9.25□□□□□ -0.93
MCF2L2-205ENST00000461074 GRM1Q13255 1194 aa9.25□□□□□ -0.93
MCF2L2-205ENST00000461074 SH3GLB2Q9NR46 395 aa9.25□□□□□ -0.93
MCF2L2-205ENST00000461074 POLGP54098 1239 aaPredicted RBP9.25□□□□□ -0.93
MCF2L2-205ENST00000461074 PTK2Q05397 1052 aa9.25□□□□□ -0.93
MCF2L2-205ENST00000461074 SPOUT1Q5T280 376 aaKnown RBP9.25□□□□□ -0.93
MCF2L2-205ENST00000461074 GKAP1Q5VSY0 366 aaPredicted RBP9.25□□□□□ -0.93
MCF2L2-205ENST00000461074 ANKRD20A3Q5VUR7 823 aa9.25□□□□□ -0.93
MCF2L2-205ENST00000461074 PLA2G4DQ86XP0 818 aa9.25□□□□□ -0.93
MCF2L2-205ENST00000461074 CPXCR1Q8N123 301 aa9.25□□□□□ -0.93
MCF2L2-205ENST00000461074 CBX8Q9HC52 389 aa9.25□□□□□ -0.93
MCF2L2-205ENST00000461074 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP9.25□□□□□ -0.93
MCF2L2-205ENST00000461074 IGSF1Q8N6C5 1336 aa9.25□□□□□ -0.93
MCF2L2-205ENST00000461074 LOC102724428A0A0B4J2F2 783 aa9.25□□□□□ -0.93
MCF2L2-205ENST00000461074 USP17L12C9JPN9 530 aa9.25□□□□□ -0.93
MCF2L2-205ENST00000461074 USP17L21D6R901 530 aa9.25□□□□□ -0.93
MCF2L2-205ENST00000461074 SIK1P57059 783 aa9.25□□□□□ -0.93
MCF2L2-205ENST00000461074 MORC3Q14149 939 aa9.25□□□□□ -0.93
MCF2L2-205ENST00000461074 UAP1Q16222 522 aaPredicted RBP9.25□□□□□ -0.93
MCF2L2-205ENST00000461074 XKR9Q5GH70 373 aa9.25□□□□□ -0.93
MCF2L2-205ENST00000461074 BEND3Q5T5X7 828 aa9.25□□□□□ -0.93
MCF2L2-205ENST00000461074 TTC39CQ8N584 583 aa9.25□□□□□ -0.93
MCF2L2-205ENST00000461074 ANKRD36BP1Q96IX9 119 aa9.25□□□□□ -0.93
MCF2L2-205ENST00000461074 FAM227BQ96M60 508 aa9.25□□□□□ -0.93
MCF2L2-205ENST00000461074 Q9H521 79 aa9.25□□□□□ -0.93
MCF2L2-205ENST00000461074 PKD2L1Q9P0L9 805 aa9.25□□□□□ -0.93
MCF2L2-205ENST00000461074 PASKQ96RG2 1323 aa9.25□□□□□ -0.93
MCF2L2-205ENST00000461074 USP6P35125 1406 aa9.25□□□□□ -0.93
MCF2L2-205ENST00000461074 K7ENM7 598 aa9.25□□□□□ -0.93
MCF2L2-205ENST00000461074 CCND2P30279 289 aa9.25□□□□□ -0.93
MCF2L2-205ENST00000461074 HSP90AA4PQ58FG1 418 aa9.25□□□□□ -0.93
MCF2L2-205ENST00000461074 TBRG4Q969Z0 631 aaKnown RBP eCLIP9.25□□□□□ -0.93
MCF2L2-205ENST00000461074 PTCH1Q13635 1447 aa9.25□□□□□ -0.93
MCF2L2-205ENST00000461074 BTDP43251 543 aa9.24□□□□□ -0.93
MCF2L2-205ENST00000461074 USH1GQ495M9 461 aa9.24□□□□□ -0.93
MCF2L2-205ENST00000461074 TNKSO95271 1327 aa9.24□□□□□ -0.93
MCF2L2-205ENST00000461074 CARMIL3Q8ND23 1372 aa9.24□□□□□ -0.93
MCF2L2-205ENST00000461074 NDUFAB1O14561 156 aa9.24□□□□□ -0.93
MCF2L2-205ENST00000461074 CTDSPL2Q05D32 466 aa9.24□□□□□ -0.93
MCF2L2-205ENST00000461074 FAM102BQ5T8I3 360 aa9.24□□□□□ -0.93
MCF2L2-205ENST00000461074 PLIN2Q99541 437 aa9.24□□□□□ -0.93
MCF2L2-205ENST00000461074 LSM14BQ9BX40 385 aaKnown RBP9.24□□□□□ -0.93
MCF2L2-205ENST00000461074 CPSF1Q10570 1443 aaKnown RBP9.24□□□□□ -0.93
MCF2L2-205ENST00000461074 FBLN1P23142 703 aa9.24□□□□□ -0.93
MCF2L2-205ENST00000461074 FAM26FQ5R3K3 315 aa9.24□□□□□ -0.93
MCF2L2-205ENST00000461074 BZW1Q7L1Q6 419 aaKnown RBP9.24□□□□□ -0.93
MCF2L2-205ENST00000461074 KRT12Q99456 494 aa9.24□□□□□ -0.93
MCF2L2-205ENST00000461074 MED10Q9BTT4 135 aa9.24□□□□□ -0.93
MCF2L2-205ENST00000461074 LGR6Q9HBX8 967 aa9.24□□□□□ -0.93
MCF2L2-205ENST00000461074 MED4Q9NPJ6 270 aa9.24□□□□□ -0.93
MCF2L2-205ENST00000461074 CCDC93Q567U6 631 aa9.24□□□□□ -0.93
MCF2L2-205ENST00000461074 SLC7A3Q8WY07 619 aa9.24□□□□□ -0.93
MCF2L2-205ENST00000461074 ACCSQ96QU6 501 aa9.24□□□□□ -0.93
MCF2L2-205ENST00000461074 ZMYND15Q9H091 742 aa9.24□□□□□ -0.93
MCF2L2-205ENST00000461074 KRT15P19012 456 aa9.24□□□□□ -0.93
MCF2L2-205ENST00000461074 HSPA2P54652 639 aa9.24□□□□□ -0.93
MCF2L2-205ENST00000461074 PPP1R18Q6NYC8 613 aa9.24□□□□□ -0.93
MCF2L2-205ENST00000461074 PALM2Q8IXS6 379 aa9.24□□□□□ -0.93
MCF2L2-205ENST00000461074 FBXO40Q9UH90 709 aa9.24□□□□□ -0.93
MCF2L2-205ENST00000461074 JRKLQ9Y4A0 524 aa9.24□□□□□ -0.93
MCF2L2-205ENST00000461074 WDR19Q8NEZ3 1342 aa9.24□□□□□ -0.93
MCF2L2-205ENST00000461074 H2AFZP0C0S5 128 aa9.24□□□□□ -0.93
MCF2L2-205ENST00000461074 PPARGP37231 505 aaPredicted RBP9.24□□□□□ -0.93
MCF2L2-205ENST00000461074 ZMYM1Q5SVZ6 1142 aa9.24□□□□□ -0.93
MCF2L2-205ENST00000461074 H2AFVQ71UI9 128 aa9.24□□□□□ -0.93
MCF2L2-205ENST00000461074 FOXP4Q8IVH2 680 aaPredicted RBP9.24□□□□□ -0.93
MCF2L2-205ENST00000461074 MICALL1Q8N3F8 863 aa9.24□□□□□ -0.93
MCF2L2-205ENST00000461074 PCDHA4Q9UN74 947 aa9.24□□□□□ -0.93
MCF2L2-205ENST00000461074 AFG3L2Q9Y4W6 797 aa9.24□□□□□ -0.93
MCF2L2-205ENST00000461074 CCDC160A6NGH7 325 aa9.23□□□□□ -0.93
MCF2L2-205ENST00000461074 ATP8B1O43520 1251 aa9.23□□□□□ -0.93
MCF2L2-205ENST00000461074 S100BP04271 92 aaPredicted RBP9.23□□□□□ -0.93
MCF2L2-205ENST00000461074 NPR1P16066 1061 aa9.23□□□□□ -0.93
MCF2L2-205ENST00000461074 NSFP46459 744 aaKnown RBP9.23□□□□□ -0.93
MCF2L2-205ENST00000461074 IREB2P48200 963 aaKnown RBP9.23□□□□□ -0.93
MCF2L2-205ENST00000461074 ERVK-7P63135 1459 aa9.23□□□□□ -0.93
MCF2L2-205ENST00000461074 CHRNDQ07001 517 aa9.23□□□□□ -0.93
MCF2L2-205ENST00000461074 LONRF2Q1L5Z9 754 aa9.23□□□□□ -0.93
MCF2L2-205ENST00000461074 ARMCX5Q6P1M9 558 aa9.23□□□□□ -0.93
MCF2L2-205ENST00000461074 FAM167AQ96KS9 214 aa9.23□□□□□ -0.93
MCF2L2-205ENST00000461074 NT5C1BQ96P26 610 aa9.23□□□□□ -0.93
MCF2L2-205ENST00000461074 DAAM1Q9Y4D1 1078 aa9.23□□□□□ -0.93
MCF2L2-205ENST00000461074 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP9.23□□□□□ -0.93
MCF2L2-205ENST00000461074 TAF5LO75529 589 aa9.23□□□□□ -0.93
MCF2L2-205ENST00000461074 HSPD1P10809 573 aaKnown RBP9.23□□□□□ -0.93
MCF2L2-205ENST00000461074 PHLDB3Q6NSJ2 640 aa9.23□□□□□ -0.93
MCF2L2-205ENST00000461074 KRBA2Q6ZNG9 492 aa9.23□□□□□ -0.93
MCF2L2-205ENST00000461074 MRPL47Q9HD33 250 aaKnown RBP9.23□□□□□ -0.93
MCF2L2-205ENST00000461074 PPANQ9NQ55 473 aaKnown RBP9.23□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms