RNA–Protein interactions for RNA: ENST00000461047.2

NUP98-208, Transcript of nucleoporin 98, humanhuman

TSL 3

Gene NUP98, Length 545 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP98-208ENST00000461047 EFSO43281 561 aa7.05□□□□□ -1.28
NUP98-208ENST00000461047 EPB41L2O43491 1005 aaKnown RBP7.05□□□□□ -1.28
NUP98-208ENST00000461047 TOMM70O94826 608 aa7.05□□□□□ -1.28
NUP98-208ENST00000461047 DYNLL1P63167 89 aaKnown RBP7.05□□□□□ -1.28
NUP98-208ENST00000461047 TCP10Q12799 353 aa7.05□□□□□ -1.28
NUP98-208ENST00000461047 PICALMQ13492 652 aa7.05□□□□□ -1.28
NUP98-208ENST00000461047 GRIN2CQ14957 1233 aa7.05□□□□□ -1.28
NUP98-208ENST00000461047 HIF1AQ16665 826 aa7.05□□□□□ -1.28
NUP98-208ENST00000461047 SH3PXD2AQ5TCZ1 1133 aa7.05□□□□□ -1.28
NUP98-208ENST00000461047 DCAF15Q66K64 600 aa7.05□□□□□ -1.28
NUP98-208ENST00000461047 LCORLQ8N3X6 602 aa7.05□□□□□ -1.28
NUP98-208ENST00000461047 CRACR2BQ8N4Y2 399 aaPredicted RBP7.05□□□□□ -1.28
NUP98-208ENST00000461047 TRPM4Q8TD43 1214 aa7.05□□□□□ -1.28
NUP98-208ENST00000461047 SH3RF3Q8TEJ3 882 aaPredicted RBP7.05□□□□□ -1.28
NUP98-208ENST00000461047 FAM227BQ96M60 508 aa7.05□□□□□ -1.28
NUP98-208ENST00000461047 CEP63Q96MT8 703 aa7.05□□□□□ -1.28
NUP98-208ENST00000461047 RIOK1Q9BRS2 568 aaKnown RBP7.05□□□□□ -1.28
NUP98-208ENST00000461047 DSCC1Q9BVC3 393 aa7.05□□□□□ -1.28
NUP98-208ENST00000461047 DEFB129Q9H1M3 183 aa7.05□□□□□ -1.28
NUP98-208ENST00000461047 VRTNQ9H8Y1 702 aa7.05□□□□□ -1.28
NUP98-208ENST00000461047 NMRK2Q9NPI5 230 aa7.05□□□□□ -1.28
NUP98-208ENST00000461047 ANO2Q9NQ90 1003 aa7.05□□□□□ -1.28
NUP98-208ENST00000461047 MCM9Q9NXL9 1143 aa7.05□□□□□ -1.28
NUP98-208ENST00000461047 GGA3Q9NZ52 723 aa7.05□□□□□ -1.28
NUP98-208ENST00000461047 NOP53Q9NZM5 478 aaKnown RBP7.05□□□□□ -1.28
NUP98-208ENST00000461047 PI4KBQ9UBF8 816 aa7.05□□□□□ -1.28
NUP98-208ENST00000461047 ARPP21Q9UBL0 812 aaPredicted RBP7.05□□□□□ -1.28
NUP98-208ENST00000461047 PGAP2Q9UHJ9 254 aa7.05□□□□□ -1.28
NUP98-208ENST00000461047 COL4A5P29400 1685 aa7.05□□□□□ -1.28
NUP98-208ENST00000461047 A0A0D9SFI3 127 aa7.04□□□□□ -1.28
NUP98-208ENST00000461047 M0R2C6 588 aa7.04□□□□□ -1.28
NUP98-208ENST00000461047 ZNF213O14771 459 aa7.04□□□□□ -1.28
NUP98-208ENST00000461047 PCP11498 1178 aaKnown RBP7.04□□□□□ -1.28
NUP98-208ENST00000461047 ZKSCAN1P17029 563 aaPredicted RBP7.04□□□□□ -1.28
NUP98-208ENST00000461047 NT5C2P49902 561 aa7.04□□□□□ -1.28
NUP98-208ENST00000461047 HIRAP54198 1017 aaPredicted RBP7.04□□□□□ -1.28
NUP98-208ENST00000461047 RHBDL3P58872 404 aa7.04□□□□□ -1.28
NUP98-208ENST00000461047 PDE4BQ07343 736 aa7.04□□□□□ -1.28
NUP98-208ENST00000461047 FSTL1Q12841 308 aa7.04□□□□□ -1.28
NUP98-208ENST00000461047 TRDNQ13061 729 aa7.04□□□□□ -1.28
NUP98-208ENST00000461047 RASA3Q14644 834 aa7.04□□□□□ -1.28
NUP98-208ENST00000461047 ALX1Q15699 326 aa7.04□□□□□ -1.28
NUP98-208ENST00000461047 IMMTQ16891 758 aaKnown RBP7.04□□□□□ -1.28
NUP98-208ENST00000461047 PLA2G4EQ3MJ16 856 aa7.04□□□□□ -1.28
NUP98-208ENST00000461047 CHSY3Q70JA7 882 aa7.04□□□□□ -1.28
NUP98-208ENST00000461047 ADGRA1Q86SQ6 560 aa7.04□□□□□ -1.28
NUP98-208ENST00000461047 USP48Q86UV5 1035 aa7.04□□□□□ -1.28
NUP98-208ENST00000461047 SKAP1Q86WV1 359 aa7.04□□□□□ -1.28
NUP98-208ENST00000461047 MAPKAPK5Q8IW41 473 aa7.04□□□□□ -1.28
NUP98-208ENST00000461047 IFNL3Q8IZI9 196 aa7.04□□□□□ -1.28
NUP98-208ENST00000461047 ZNF384Q8TF68 577 aa7.04□□□□□ -1.28
NUP98-208ENST00000461047 SCG3Q8WXD2 468 aaKnown RBP7.04□□□□□ -1.28
NUP98-208ENST00000461047 RNF41Q9H4P4 317 aaPredicted RBP7.04□□□□□ -1.28
NUP98-208ENST00000461047 HERC5Q9UII4 1024 aaKnown RBP7.04□□□□□ -1.28
NUP98-208ENST00000461047 CHD4Q14839 1912 aa7.03□□□□□ -1.28
NUP98-208ENST00000461047 A0A1B0GUL6 1792 aa7.03□□□□□ -1.28
NUP98-208ENST00000461047 SHTN1A0MZ66 631 aa7.03□□□□□ -1.28
NUP98-208ENST00000461047 GSG1L2A8MUP6 293 aa7.03□□□□□ -1.28
NUP98-208ENST00000461047 MINDY4BA8MYZ0 360 aa7.03□□□□□ -1.28
NUP98-208ENST00000461047 USP17L12C9JPN9 530 aa7.03□□□□□ -1.28
NUP98-208ENST00000461047 USP17L21D6R901 530 aa7.03□□□□□ -1.28
NUP98-208ENST00000461047 WDHD1O75717 1129 aaPredicted RBP7.03□□□□□ -1.28
NUP98-208ENST00000461047 HSPD1P10809 573 aaKnown RBP7.03□□□□□ -1.28
NUP98-208ENST00000461047 CACNB3P54284 484 aa7.03□□□□□ -1.28
NUP98-208ENST00000461047 SBK1Q52WX2 424 aa7.03□□□□□ -1.28
NUP98-208ENST00000461047 ARMC9Q7Z3E5 817 aa7.03□□□□□ -1.28
NUP98-208ENST00000461047 SYT9Q86SS6 491 aa7.03□□□□□ -1.28
NUP98-208ENST00000461047 C2orf69Q8N8R5 385 aa7.03□□□□□ -1.28
NUP98-208ENST00000461047 SDR42E1Q8WUS8 393 aa7.03□□□□□ -1.28
NUP98-208ENST00000461047 CSRNP1Q96S65 589 aa7.03□□□□□ -1.28
NUP98-208ENST00000461047 SEC62Q99442 399 aaKnown RBP7.03□□□□□ -1.28
NUP98-208ENST00000461047 OSBPL5Q9H0X9 879 aaPredicted RBP7.03□□□□□ -1.28
NUP98-208ENST00000461047 MKNK2Q9HBH9 465 aa7.03□□□□□ -1.28
NUP98-208ENST00000461047 DCP1AQ9NPI6 582 aaPredicted RBP7.03□□□□□ -1.28
NUP98-208ENST00000461047 SWAP70Q9UH65 585 aa7.03□□□□□ -1.28
NUP98-208ENST00000461047 DICER1Q9UPY3 1922 aaKnown RBP7.03□□□□□ -1.28
NUP98-208ENST00000461047 ZMYM6O95789 1325 aa7.02□□□□□ -1.28
NUP98-208ENST00000461047 FLT1P17948 1338 aa7.02□□□□□ -1.28
NUP98-208ENST00000461047 UNCXA6NJT0 531 aa7.02□□□□□ -1.29
NUP98-208ENST00000461047 PRKAB2O43741 272 aa7.02□□□□□ -1.29
NUP98-208ENST00000461047 FGAP02671 866 aa7.02□□□□□ -1.29
NUP98-208ENST00000461047 IREB2P48200 963 aaKnown RBP7.02□□□□□ -1.29
NUP98-208ENST00000461047 FKBP1BP68106 108 aa7.02□□□□□ -1.29
NUP98-208ENST00000461047 DPYDQ12882 1025 aa7.02□□□□□ -1.29
NUP98-208ENST00000461047 KRT32Q14532 448 aa7.02□□□□□ -1.29
NUP98-208ENST00000461047 CCDC178Q5BJE1 867 aa7.02□□□□□ -1.29
NUP98-208ENST00000461047 C12orf60Q5U649 245 aa7.02□□□□□ -1.29
NUP98-208ENST00000461047 CCDC129Q6ZRS4 1044 aa7.02□□□□□ -1.29
NUP98-208ENST00000461047 MFSD6Q6ZSS7 791 aa7.02□□□□□ -1.29
NUP98-208ENST00000461047 FCHSD1Q86WN1 690 aa7.02□□□□□ -1.29
NUP98-208ENST00000461047 ALDH16A1Q8IZ83 802 aa7.02□□□□□ -1.29
NUP98-208ENST00000461047 ZNF444Q8N0Y2 327 aaPredicted RBP7.02□□□□□ -1.29
NUP98-208ENST00000461047 STAG2Q8N3U4 1231 aa7.02□□□□□ -1.29
NUP98-208ENST00000461047 MAP4K1Q92918 833 aa7.02□□□□□ -1.29
NUP98-208ENST00000461047 HSH2DQ96JZ2 352 aa7.02□□□□□ -1.29
NUP98-208ENST00000461047 CCDC17Q96LX7 622 aa7.02□□□□□ -1.29
NUP98-208ENST00000461047 ZNF341Q9BYN7 854 aa7.02□□□□□ -1.29
NUP98-208ENST00000461047 KRT23Q9C075 422 aa7.02□□□□□ -1.29
NUP98-208ENST00000461047 EHD4Q9H223 541 aa7.02□□□□□ -1.29
NUP98-208ENST00000461047 CNNM2Q9H8M5 875 aa7.02□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 79.8 ms