RNA–Protein interactions for RNA: ENST00000460767.5

SCAMP4-206, Transcript of secretory carrier membrane protein 4, humanhuman

TSL 4

Gene SCAMP4, Length 569 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-206ENST00000460767 TDO2P48775 406 aa16.18■□□□□ 0.18
SCAMP4-206ENST00000460767 ACVR2BQ13705 512 aa16.18■□□□□ 0.18
SCAMP4-206ENST00000460767 NAPBQ9H115 298 aa16.18■□□□□ 0.18
SCAMP4-206ENST00000460767 CDKN2AIPQ9NXV6 580 aaPredicted RBP16.18■□□□□ 0.18
SCAMP4-206ENST00000460767 YBX2Q9Y2T7 364 aaKnown RBP16.18■□□□□ 0.18
SCAMP4-206ENST00000460767 MINDY4BA8MYZ0 360 aa16.17■□□□□ 0.18
SCAMP4-206ENST00000460767 CABYRO75952 493 aa16.17■□□□□ 0.18
SCAMP4-206ENST00000460767 CHMLP26374 656 aa16.17■□□□□ 0.18
SCAMP4-206ENST00000460767 FAM83BQ5T0W9 1011 aa16.17■□□□□ 0.18
SCAMP4-206ENST00000460767 CWC27Q6UX04 472 aaKnown RBP16.17■□□□□ 0.18
SCAMP4-206ENST00000460767 SKAP1Q86WV1 359 aa16.17■□□□□ 0.18
SCAMP4-206ENST00000460767 DDX11Q96FC9 970 aa16.17■□□□□ 0.18
SCAMP4-206ENST00000460767 FGD4Q96M96 766 aa16.17■□□□□ 0.18
SCAMP4-206ENST00000460767 SLF1Q9BQI6 1058 aa16.17■□□□□ 0.18
SCAMP4-206ENST00000460767 PPP1R12CQ9BZL4 782 aa16.17■□□□□ 0.18
SCAMP4-206ENST00000460767 KATNBL1Q9H079 304 aa16.17■□□□□ 0.18
SCAMP4-206ENST00000460767 NKX2-4Q9H2Z4 354 aa16.17■□□□□ 0.18
SCAMP4-206ENST00000460767 RAD50Q92878 1312 aa16.17■□□□□ 0.18
SCAMP4-206ENST00000460767 MCM3APO60318 1980 aa16.17■□□□□ 0.18
SCAMP4-206ENST00000460767 CHD9Q3L8U1 2897 aa16.16■□□□□ 0.18
SCAMP4-206ENST00000460767 MYH4Q9Y623 1939 aa16.16■□□□□ 0.18
SCAMP4-206ENST00000460767 FGBP02675 491 aa16.16■□□□□ 0.18
SCAMP4-206ENST00000460767 APPP05067 770 aa16.16■□□□□ 0.18
SCAMP4-206ENST00000460767 ACRP10323 421 aa16.16■□□□□ 0.18
SCAMP4-206ENST00000460767 IGFBP4P22692 258 aa16.16■□□□□ 0.18
SCAMP4-206ENST00000460767 BMP2KLQ5H9B9 411 aa16.16■□□□□ 0.18
SCAMP4-206ENST00000460767 SNRNP48Q6IEG0 339 aaKnown RBP16.16■□□□□ 0.18
SCAMP4-206ENST00000460767 DSCC1Q9BVC3 393 aa16.16■□□□□ 0.18
SCAMP4-206ENST00000460767 FBXO40Q9UH90 709 aa16.16■□□□□ 0.18
SCAMP4-206ENST00000460767 SYNPO2Q9UMS6 1093 aa16.16■□□□□ 0.18
SCAMP4-206ENST00000460767 PCDHA11Q9Y5I1 949 aa16.16■□□□□ 0.18
SCAMP4-206ENST00000460767 ORC4O43929 436 aa16.15■□□□□ 0.18
SCAMP4-206ENST00000460767 OAZ1P54368 228 aa16.15■□□□□ 0.18
SCAMP4-206ENST00000460767 CCDC85BQ15834 202 aaPredicted RBP16.15■□□□□ 0.18
SCAMP4-206ENST00000460767 CCDC144BQ3MJ40 725 aa16.15■□□□□ 0.18
SCAMP4-206ENST00000460767 GNASQ5JWF2 1037 aa16.15■□□□□ 0.18
SCAMP4-206ENST00000460767 MKL1Q969V6 931 aa16.15■□□□□ 0.18
SCAMP4-206ENST00000460767 HIPK3Q9H422 1215 aa16.15■□□□□ 0.18
SCAMP4-206ENST00000460767 DIAPH3Q9NSV4 1193 aa16.15■□□□□ 0.18
SCAMP4-206ENST00000460767 RIPK3Q9Y572 518 aa16.15■□□□□ 0.18
SCAMP4-206ENST00000460767 CENPBP07199 599 aaPredicted RBP16.14■□□□□ 0.17
SCAMP4-206ENST00000460767 PFKMP08237 780 aa16.14■□□□□ 0.17
SCAMP4-206ENST00000460767 CYP2C18P33260 490 aa16.14■□□□□ 0.17
SCAMP4-206ENST00000460767 MFAP1P55081 439 aaKnown RBP16.14■□□□□ 0.17
SCAMP4-206ENST00000460767 IRX5P78411 483 aaPredicted RBP16.14■□□□□ 0.17
SCAMP4-206ENST00000460767 PPP2R2DQ66LE6 453 aa16.14■□□□□ 0.17
SCAMP4-206ENST00000460767 SAMD1Q6SPF0 538 aaPredicted RBP16.14■□□□□ 0.17
SCAMP4-206ENST00000460767 ARMCX2Q7L311 632 aa16.14■□□□□ 0.17
SCAMP4-206ENST00000460767 PRPF38AQ8NAV1 312 aaKnown RBP16.14■□□□□ 0.17
SCAMP4-206ENST00000460767 CHST13Q8NET6 341 aa16.14■□□□□ 0.17
SCAMP4-206ENST00000460767 NEDD1Q8NHV4 660 aa16.14■□□□□ 0.17
SCAMP4-206ENST00000460767 NYAP2Q9P242 653 aa16.14■□□□□ 0.17
SCAMP4-206ENST00000460767 HCN4Q9Y3Q4 1203 aa16.14■□□□□ 0.17
SCAMP4-206ENST00000460767 MYO9BQ13459 2157 aa16.14■□□□□ 0.17
SCAMP4-206ENST00000460767 SGSM2O43147 1006 aa16.13■□□□□ 0.17
SCAMP4-206ENST00000460767 PRDM1O75626 825 aa16.13■□□□□ 0.17
SCAMP4-206ENST00000460767 PDE4BQ07343 736 aa16.13■□□□□ 0.17
SCAMP4-206ENST00000460767 CCDC136Q96JN2 1154 aa16.13■□□□□ 0.17
SCAMP4-206ENST00000460767 NOC4LQ9BVI4 516 aaKnown RBP16.13■□□□□ 0.17
SCAMP4-206ENST00000460767 ZNF287Q9HBT7 754 aa16.13■□□□□ 0.17
SCAMP4-206ENST00000460767 INCENPQ9NQS7 918 aa16.13■□□□□ 0.17
SCAMP4-206ENST00000460767 IL17RBQ9NRM6 502 aa16.13■□□□□ 0.17
SCAMP4-206ENST00000460767 MTMR4Q9NYA4 1195 aa16.13■□□□□ 0.17
SCAMP4-206ENST00000460767 COG5Q9UP83 839 aa16.13■□□□□ 0.17
SCAMP4-206ENST00000460767 GNEQ9Y223 722 aaKnown RBP16.13■□□□□ 0.17
SCAMP4-206ENST00000460767 TCF20Q9UGU0 1960 aaKnown RBP16.13■□□□□ 0.17
SCAMP4-206ENST00000460767 PCP11498 1178 aaKnown RBP16.12■□□□□ 0.17
SCAMP4-206ENST00000460767 CTDSPL2Q05D32 466 aa16.12■□□□□ 0.17
SCAMP4-206ENST00000460767 TBC1D10CQ8IV04 446 aa16.12■□□□□ 0.17
SCAMP4-206ENST00000460767 RPUSD2Q8IZ73 545 aaKnown RBP16.12■□□□□ 0.17
SCAMP4-206ENST00000460767 VTI1AQ96AJ9 217 aa16.12■□□□□ 0.17
SCAMP4-206ENST00000460767 CEP95Q96GE4 821 aa16.12■□□□□ 0.17
SCAMP4-206ENST00000460767 NECAB3Q96P71 396 aaPredicted RBP16.12■□□□□ 0.17
SCAMP4-206ENST00000460767 WNT8AQ9H1J5 351 aa16.12■□□□□ 0.17
SCAMP4-206ENST00000460767 MKNK2Q9HBH9 465 aa16.12■□□□□ 0.17
SCAMP4-206ENST00000460767 SLC38A10Q9HBR0 1119 aa16.12■□□□□ 0.17
SCAMP4-206ENST00000460767 ASTN1O14525 1302 aa16.12■□□□□ 0.17
SCAMP4-206ENST00000460767 BDP1A6H8Y1 2624 aa16.12■□□□□ 0.17
SCAMP4-206ENST00000460767 F5H6K3 240 aa16.11■□□□□ 0.17
SCAMP4-206ENST00000460767 FDX1P10109 184 aa16.11■□□□□ 0.17
SCAMP4-206ENST00000460767 KLRC3Q07444 240 aa16.11■□□□□ 0.17
SCAMP4-206ENST00000460767 OTOP2Q7RTS6 562 aa16.11■□□□□ 0.17
SCAMP4-206ENST00000460767 CCDC144CPQ8IYA2 1237 aa16.11■□□□□ 0.17
SCAMP4-206ENST00000460767 STAG1Q8WVM7 1258 aa16.11■□□□□ 0.17
SCAMP4-206ENST00000460767 VWCEQ96DN2 955 aa16.11■□□□□ 0.17
SCAMP4-206ENST00000460767 LRFN3Q9BTN0 628 aa16.11■□□□□ 0.17
SCAMP4-206ENST00000460767 Q9Y3F1 56 aa16.11■□□□□ 0.17
SCAMP4-206ENST00000460767 SLC4A7Q9Y6M7 1214 aa16.11■□□□□ 0.17
SCAMP4-206ENST00000460767 TANC1Q9C0D5 1861 aa16.11■□□□□ 0.17
SCAMP4-206ENST00000460767 UMODL1Q5DID0 1318 aa16.11■□□□□ 0.17
SCAMP4-206ENST00000460767 ZBED4O75132 1171 aa16.1■□□□□ 0.17
SCAMP4-206ENST00000460767 NDUFB10O96000 172 aa16.1■□□□□ 0.17
SCAMP4-206ENST00000460767 SLC3A2P08195 630 aaKnown RBP16.1■□□□□ 0.17
SCAMP4-206ENST00000460767 NT5C2P49902 561 aa16.1■□□□□ 0.17
SCAMP4-206ENST00000460767 KCNQ1P51787 676 aa16.1■□□□□ 0.17
SCAMP4-206ENST00000460767 TFF2Q03403 129 aa16.1■□□□□ 0.17
SCAMP4-206ENST00000460767 ITGA7Q13683 1181 aa16.1■□□□□ 0.17
SCAMP4-206ENST00000460767 ZNF444Q8N0Y2 327 aaPredicted RBP16.1■□□□□ 0.17
SCAMP4-206ENST00000460767 ANKRD35Q8N283 1001 aa16.1■□□□□ 0.17
SCAMP4-206ENST00000460767 FAM133AQ8N9E0 248 aa16.1■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms