RNA–Protein interactions for RNA: ENST00000460002.1

PCOLCE-202, Transcript of procollagen C-endopeptidase enhancer, humanhuman

TSL 3

Gene PCOLCE, Length 447 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCOLCE-202ENST00000460002 PPIL4Q8WUA2 492 aaKnown RBP eCLIP16.44■□□□□ 0.22
PCOLCE-202ENST00000460002 RAD9AQ99638 391 aa16.44■□□□□ 0.22
PCOLCE-202ENST00000460002 C17orf80Q9BSJ5 609 aa16.44■□□□□ 0.22
PCOLCE-202ENST00000460002 FSD1Q9BTV5 496 aa16.44■□□□□ 0.22
PCOLCE-202ENST00000460002 MCM3APO60318 1980 aa16.44■□□□□ 0.22
PCOLCE-202ENST00000460002 RIF1Q5UIP0 2472 aaKnown RBP16.43■□□□□ 0.22
PCOLCE-202ENST00000460002 ZEB2O60315 1214 aa16.43■□□□□ 0.22
PCOLCE-202ENST00000460002 GJB5O95377 273 aa16.43■□□□□ 0.22
PCOLCE-202ENST00000460002 LTBRP36941 435 aa16.43■□□□□ 0.22
PCOLCE-202ENST00000460002 SNRNP48Q6IEG0 339 aaKnown RBP16.43■□□□□ 0.22
PCOLCE-202ENST00000460002 FBXO22Q8NEZ5 403 aa16.43■□□□□ 0.22
PCOLCE-202ENST00000460002 POP1Q99575 1024 aaKnown RBP16.43■□□□□ 0.22
PCOLCE-202ENST00000460002 TEX13BQ9BXU2 312 aa16.43■□□□□ 0.22
PCOLCE-202ENST00000460002 AP5M1Q9H0R1 490 aa16.43■□□□□ 0.22
PCOLCE-202ENST00000460002 ARHGEF10LQ9HCE6 1279 aa16.43■□□□□ 0.22
PCOLCE-202ENST00000460002 PIH1D3Q9NQM4 214 aaKnown RBP16.43■□□□□ 0.22
PCOLCE-202ENST00000460002 DMDP11532 3685 aa16.43■□□□□ 0.22
PCOLCE-202ENST00000460002 SIP14410 1827 aa16.42■□□□□ 0.22
PCOLCE-202ENST00000460002 TET1Q8NFU7 2136 aa16.42■□□□□ 0.22
PCOLCE-202ENST00000460002 PITPNM1O00562 1244 aa16.42■□□□□ 0.22
PCOLCE-202ENST00000460002 SMPD1P17405 629 aa16.42■□□□□ 0.22
PCOLCE-202ENST00000460002 ICA1Q05084 483 aa16.42■□□□□ 0.22
PCOLCE-202ENST00000460002 TIGD5Q53EQ6 642 aa16.42■□□□□ 0.22
PCOLCE-202ENST00000460002 TMEM63BQ5T3F8 832 aa16.42■□□□□ 0.22
PCOLCE-202ENST00000460002 BANK1Q8NDB2 785 aa16.42■□□□□ 0.22
PCOLCE-202ENST00000460002 CLDND1Q9NY35 253 aa16.42■□□□□ 0.22
PCOLCE-202ENST00000460002 FAM186AA6NE01 2351 aa16.42■□□□□ 0.22
PCOLCE-202ENST00000460002 POLR3DP05423 398 aaPredicted RBP16.41■□□□□ 0.22
PCOLCE-202ENST00000460002 AVPR2P30518 371 aa16.41■□□□□ 0.22
PCOLCE-202ENST00000460002 ZXDAP98168 799 aa16.41■□□□□ 0.22
PCOLCE-202ENST00000460002 CLUL1Q15846 466 aa16.41■□□□□ 0.22
PCOLCE-202ENST00000460002 RETREG2Q8NC44 543 aa16.41■□□□□ 0.22
PCOLCE-202ENST00000460002 SH2D4AQ9H788 454 aa16.41■□□□□ 0.22
PCOLCE-202ENST00000460002 CTNNA3Q9UI47 895 aa16.41■□□□□ 0.22
PCOLCE-202ENST00000460002 TANC1Q9C0D5 1861 aa16.41■□□□□ 0.22
PCOLCE-202ENST00000460002 RBAK-RBAKDNI3L0D1 243 aa16.4■□□□□ 0.22
PCOLCE-202ENST00000460002 MBTPS2O43462 519 aa16.4■□□□□ 0.22
PCOLCE-202ENST00000460002 SLC4A3P48751 1232 aa16.4■□□□□ 0.22
PCOLCE-202ENST00000460002 GPNMBQ14956 572 aa16.4■□□□□ 0.22
PCOLCE-202ENST00000460002 PTPROQ16827 1216 aa16.4■□□□□ 0.22
PCOLCE-202ENST00000460002 DHX30Q7L2E3 1194 aaKnown RBP eCLIP16.4■□□□□ 0.22
PCOLCE-202ENST00000460002 PPP1R13LQ8WUF5 828 aa16.4■□□□□ 0.22
PCOLCE-202ENST00000460002 AKR1B1P15121 316 aa16.39■□□□□ 0.21
PCOLCE-202ENST00000460002 ZAP70P43403 619 aa16.39■□□□□ 0.21
PCOLCE-202ENST00000460002 CNTN2Q02246 1040 aa16.39■□□□□ 0.21
PCOLCE-202ENST00000460002 DLX2Q07687 328 aaPredicted RBP16.39■□□□□ 0.21
PCOLCE-202ENST00000460002 TCTN1Q2MV58 587 aa16.39■□□□□ 0.21
PCOLCE-202ENST00000460002 FAM83BQ5T0W9 1011 aa16.39■□□□□ 0.21
PCOLCE-202ENST00000460002 RPAINQ86UA6 219 aa16.39■□□□□ 0.21
PCOLCE-202ENST00000460002 ANKRD35Q8N283 1001 aa16.39■□□□□ 0.21
PCOLCE-202ENST00000460002 CNTNAP3BQ96NU0 1288 aa16.39■□□□□ 0.21
PCOLCE-202ENST00000460002 CNTNAP3Q9BZ76 1288 aa16.39■□□□□ 0.21
PCOLCE-202ENST00000460002 PDGFCQ9NRA1 345 aa16.39■□□□□ 0.21
PCOLCE-202ENST00000460002 MYO5AQ9Y4I1 1855 aaKnown RBP16.39■□□□□ 0.21
PCOLCE-202ENST00000460002 STXBP3O00186 592 aa16.38■□□□□ 0.21
PCOLCE-202ENST00000460002 NBL1P41271 181 aa16.38■□□□□ 0.21
PCOLCE-202ENST00000460002 TTC39AQ5SRH9 613 aa16.38■□□□□ 0.21
PCOLCE-202ENST00000460002 FAM117BQ6P1L5 589 aa16.38■□□□□ 0.21
PCOLCE-202ENST00000460002 CERS3Q8IU89 383 aa16.38■□□□□ 0.21
PCOLCE-202ENST00000460002 CRBNQ96SW2 442 aa16.38■□□□□ 0.21
PCOLCE-202ENST00000460002 DDX49Q9Y6V7 483 aaKnown RBP16.38■□□□□ 0.21
PCOLCE-202ENST00000460002 GVINP1Q7Z2Y8 2422 aa16.37■□□□□ 0.21
PCOLCE-202ENST00000460002 IGSF3O75054 1194 aa16.37■□□□□ 0.21
PCOLCE-202ENST00000460002 CTC1Q2NKJ3 1217 aa16.37■□□□□ 0.21
PCOLCE-202ENST00000460002 CCDC184Q52MB2 194 aa16.37■□□□□ 0.21
PCOLCE-202ENST00000460002 FAM47CQ5HY64 1035 aa16.37■□□□□ 0.21
PCOLCE-202ENST00000460002 CPXCR1Q8N123 301 aa16.37■□□□□ 0.21
PCOLCE-202ENST00000460002 ASIC4Q96FT7 647 aa16.37■□□□□ 0.21
PCOLCE-202ENST00000460002 NSUN3Q9H649 340 aaKnown RBP16.37■□□□□ 0.21
PCOLCE-202ENST00000460002 Q9Y3F1 56 aa16.37■□□□□ 0.21
PCOLCE-202ENST00000460002 ATP2A1O14983 1001 aa16.36■□□□□ 0.21
PCOLCE-202ENST00000460002 SRGAP3O43295 1099 aa16.36■□□□□ 0.21
PCOLCE-202ENST00000460002 CYP2D6P10635 497 aa16.36■□□□□ 0.21
PCOLCE-202ENST00000460002 EEF2P13639 858 aaKnown RBP16.36■□□□□ 0.21
PCOLCE-202ENST00000460002 PURAQ00577 322 aaKnown RBP16.36■□□□□ 0.21
PCOLCE-202ENST00000460002 BFSP2Q13515 415 aa16.36■□□□□ 0.21
PCOLCE-202ENST00000460002 EPC2Q52LR7 807 aa16.36■□□□□ 0.21
PCOLCE-202ENST00000460002 TAPT1Q6NXT6 567 aa16.36■□□□□ 0.21
PCOLCE-202ENST00000460002 ADSSL1Q8N142 457 aa16.36■□□□□ 0.21
PCOLCE-202ENST00000460002 FAM133AQ8N9E0 248 aa16.36■□□□□ 0.21
PCOLCE-202ENST00000460002 SLF1Q9BQI6 1058 aa16.36■□□□□ 0.21
PCOLCE-202ENST00000460002 DNAH14Q0VDD8 3507 aa16.36■□□□□ 0.21
PCOLCE-202ENST00000460002 NCOR2Q9Y618 2525 aa16.36■□□□□ 0.21
PCOLCE-202ENST00000460002 KDM4AO75164 1064 aa16.35■□□□□ 0.21
PCOLCE-202ENST00000460002 IDH1O75874 414 aaKnown RBP16.35■□□□□ 0.21
PCOLCE-202ENST00000460002 SIGLEC14Q08ET2 396 aa16.35■□□□□ 0.21
PCOLCE-202ENST00000460002 SMAD4Q13485 552 aaKnown RBP16.35■□□□□ 0.21
PCOLCE-202ENST00000460002 NBPF20Q3BBV1 942 aa16.35■□□□□ 0.21
PCOLCE-202ENST00000460002 CNKSR3Q6P9H4 555 aa16.35■□□□□ 0.21
PCOLCE-202ENST00000460002 DYNLL2Q96FJ2 89 aa16.35■□□□□ 0.21
PCOLCE-202ENST00000460002 NUP88Q99567 741 aaPredicted RBP16.35■□□□□ 0.21
PCOLCE-202ENST00000460002 DBNDD2Q9BQY9 259 aa16.35■□□□□ 0.21
PCOLCE-202ENST00000460002 RIOK1Q9BRS2 568 aaKnown RBP16.35■□□□□ 0.21
PCOLCE-202ENST00000460002 RAVER2Q9HCJ3 691 aaKnown RBP16.35■□□□□ 0.21
PCOLCE-202ENST00000460002 MCM9Q9NXL9 1143 aa16.35■□□□□ 0.21
PCOLCE-202ENST00000460002 H3BNC9 293 aa16.34■□□□□ 0.21
PCOLCE-202ENST00000460002 GALR2O43603 387 aaPredicted RBP16.34■□□□□ 0.21
PCOLCE-202ENST00000460002 RAD21O60216 631 aa16.34■□□□□ 0.21
PCOLCE-202ENST00000460002 GPM6BQ13491 265 aa16.34■□□□□ 0.21
PCOLCE-202ENST00000460002 LRRFIP1Q32MZ4 808 aaKnown RBP16.34■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms