RNA–Protein interactions for RNA: ENST00000459909.1

TMEM50B-205, Transcript of transmembrane protein 50B, humanhuman

TSL 2

Gene TMEM50B, Length 618 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM50B-205ENST00000459909 SLC38A10Q9HBR0 1119 aa19.83■□□□□ 0.77
TMEM50B-205ENST00000459909 NDUFB10O96000 172 aa19.82■□□□□ 0.76
TMEM50B-205ENST00000459909 OAZ1P54368 228 aa19.82■□□□□ 0.76
TMEM50B-205ENST00000459909 HDAC1Q13547 482 aaPredicted RBP19.82■□□□□ 0.76
TMEM50B-205ENST00000459909 ALYREFQ86V81 257 aaKnown RBP19.82■□□□□ 0.76
TMEM50B-205ENST00000459909 KHSRPQ92945 711 aaKnown RBP eCLIP19.82■□□□□ 0.76
TMEM50B-205ENST00000459909 BCL11AQ9H165 835 aa19.82■□□□□ 0.76
TMEM50B-205ENST00000459909 NYAP2Q9P242 653 aa19.82■□□□□ 0.76
TMEM50B-205ENST00000459909 EPOPA6NHQ4 379 aa19.81■□□□□ 0.76
TMEM50B-205ENST00000459909 PI4K2BG5E9Z4 385 aa19.81■□□□□ 0.76
TMEM50B-205ENST00000459909 ADD2P35612 726 aa19.81■□□□□ 0.76
TMEM50B-205ENST00000459909 KRT40Q6A162 431 aa19.81■□□□□ 0.76
TMEM50B-205ENST00000459909 PHOSPHO2Q8TCD6 241 aa19.81■□□□□ 0.76
TMEM50B-205ENST00000459909 KIFC2Q96AC6 838 aa19.81■□□□□ 0.76
TMEM50B-205ENST00000459909 SLC9A7Q96T83 725 aa19.81■□□□□ 0.76
TMEM50B-205ENST00000459909 IL1RAPL2Q9NP60 686 aa19.81■□□□□ 0.76
TMEM50B-205ENST00000459909 Q9Y3F1 56 aa19.81■□□□□ 0.76
TMEM50B-205ENST00000459909 FAM86C2PA6NEL3 165 aa19.8■□□□□ 0.76
TMEM50B-205ENST00000459909 ASB14A6NK59 587 aa19.8■□□□□ 0.76
TMEM50B-205ENST00000459909 DYNC1LI2O43237 492 aaPredicted RBP19.8■□□□□ 0.76
TMEM50B-205ENST00000459909 RAB11FIP3O75154 756 aa19.8■□□□□ 0.76
TMEM50B-205ENST00000459909 SUPT20HL2P0C7V6 817 aa19.8■□□□□ 0.76
TMEM50B-205ENST00000459909 ACTN1P12814 892 aa19.8■□□□□ 0.76
TMEM50B-205ENST00000459909 CNTN2Q02246 1040 aa19.8■□□□□ 0.76
TMEM50B-205ENST00000459909 CTR9Q6PD62 1173 aa19.8■□□□□ 0.76
TMEM50B-205ENST00000459909 FAM133AQ8N9E0 248 aa19.8■□□□□ 0.76
TMEM50B-205ENST00000459909 ARNTL2Q8WYA1 636 aa19.8■□□□□ 0.76
TMEM50B-205ENST00000459909 ALDH8A1Q9H2A2 487 aaPredicted RBP19.8■□□□□ 0.76
TMEM50B-205ENST00000459909 DCTPP1Q9H773 170 aa19.8■□□□□ 0.76
TMEM50B-205ENST00000459909 PRRC2BQ5JSZ5 2229 aaKnown RBP19.8■□□□□ 0.76
TMEM50B-205ENST00000459909 TRANK1O15050 2925 aa19.79■□□□□ 0.76
TMEM50B-205ENST00000459909 LRRC37A2A6NM11 1700 aa19.79■□□□□ 0.76
TMEM50B-205ENST00000459909 SMPD1P17405 629 aa19.79■□□□□ 0.76
TMEM50B-205ENST00000459909 PSMC6P62333 389 aa19.79■□□□□ 0.76
TMEM50B-205ENST00000459909 TAP1Q03518 808 aa19.79■□□□□ 0.76
TMEM50B-205ENST00000459909 RHPN1Q8TCX5 695 aa19.79■□□□□ 0.76
TMEM50B-205ENST00000459909 KIF1BPQ96EK5 621 aa19.79■□□□□ 0.76
TMEM50B-205ENST00000459909 DDX24Q9GZR7 859 aaKnown RBP eCLIP19.79■□□□□ 0.76
TMEM50B-205ENST00000459909 FEM1BQ9UK73 627 aa19.79■□□□□ 0.76
TMEM50B-205ENST00000459909 SLC4A4Q9Y6R1 1079 aa19.79■□□□□ 0.76
TMEM50B-205ENST00000459909 PIEZO1Q92508 2521 aa19.78■□□□□ 0.76
TMEM50B-205ENST00000459909 KIF28PB7ZC32 967 aa19.78■□□□□ 0.76
TMEM50B-205ENST00000459909 IGHDP01880 384 aa19.78■□□□□ 0.76
TMEM50B-205ENST00000459909 SLFNL1Q499Z3 407 aa19.78■□□□□ 0.76
TMEM50B-205ENST00000459909 IQSEC1Q6DN90 963 aa19.78■□□□□ 0.76
TMEM50B-205ENST00000459909 DEFB128Q7Z7B8 93 aa19.78■□□□□ 0.76
TMEM50B-205ENST00000459909 ACAD9Q9H845 621 aa19.78■□□□□ 0.76
TMEM50B-205ENST00000459909 HOMER2Q9NSB8 354 aa19.78■□□□□ 0.76
TMEM50B-205ENST00000459909 PAG1Q9NWQ8 432 aa19.78■□□□□ 0.76
TMEM50B-205ENST00000459909 ARPP21Q9UBL0 812 aaPredicted RBP19.78■□□□□ 0.76
TMEM50B-205ENST00000459909 PRR33A8MZF0 331 aa19.77■□□□□ 0.76
TMEM50B-205ENST00000459909 FDX1P10109 184 aa19.77■□□□□ 0.76
TMEM50B-205ENST00000459909 RFC2P35250 354 aa19.77■□□□□ 0.76
TMEM50B-205ENST00000459909 GRB10Q13322 594 aa19.77■□□□□ 0.76
TMEM50B-205ENST00000459909 CLASRPQ8N2M8 674 aaKnown RBP19.77■□□□□ 0.76
TMEM50B-205ENST00000459909 LRRCC1Q9C099 1032 aa19.77■□□□□ 0.76
TMEM50B-205ENST00000459909 SOWAHBA6NEL2 793 aa19.76■□□□□ 0.75
TMEM50B-205ENST00000459909 CYP2C9P11712 490 aa19.76■□□□□ 0.75
TMEM50B-205ENST00000459909 RASA1P20936 1047 aa19.76■□□□□ 0.75
TMEM50B-205ENST00000459909 UBE3CQ15386 1083 aa19.76■□□□□ 0.75
TMEM50B-205ENST00000459909 MKNK2Q9HBH9 465 aa19.76■□□□□ 0.75
TMEM50B-205ENST00000459909 CD320Q9NPF0 282 aa19.76■□□□□ 0.75
TMEM50B-205ENST00000459909 A1CFQ9NQ94 594 aaKnown RBP19.76■□□□□ 0.75
TMEM50B-205ENST00000459909 TRMT13Q9NUP7 481 aaKnown RBP19.76■□□□□ 0.75
TMEM50B-205ENST00000459909 CLIP2Q9UDT6 1046 aa19.76■□□□□ 0.75
TMEM50B-205ENST00000459909 ZBTB47Q9UFB7 747 aaPredicted RBP19.76■□□□□ 0.75
TMEM50B-205ENST00000459909 BAZ2AQ9UIF9 1905 aaKnown RBP19.76■□□□□ 0.75
TMEM50B-205ENST00000459909 TNKSO95271 1327 aa19.76■□□□□ 0.75
TMEM50B-205ENST00000459909 MCM3APO60318 1980 aa19.75■□□□□ 0.75
TMEM50B-205ENST00000459909 ARHGEF15O94989 841 aa19.75■□□□□ 0.75
TMEM50B-205ENST00000459909 IFIT2P09913 472 aaKnown RBP19.75■□□□□ 0.75
TMEM50B-205ENST00000459909 PTGS1P23219 599 aa19.75■□□□□ 0.75
TMEM50B-205ENST00000459909 HERC6Q8IVU3 1022 aa19.75■□□□□ 0.75
TMEM50B-205ENST00000459909 MKL1Q969V6 931 aa19.75■□□□□ 0.75
TMEM50B-205ENST00000459909 PDGFCQ9NRA1 345 aa19.75■□□□□ 0.75
TMEM50B-205ENST00000459909 LMCD1Q9NZU5 365 aa19.75■□□□□ 0.75
TMEM50B-205ENST00000459909 SYNPO2Q9UMS6 1093 aa19.75■□□□□ 0.75
TMEM50B-205ENST00000459909 SMARCA5O60264 1052 aaPredicted RBP19.74■□□□□ 0.75
TMEM50B-205ENST00000459909 LPXNO60711 386 aa19.74■□□□□ 0.75
TMEM50B-205ENST00000459909 ERICH6BQ5W0A0 696 aa19.74■□□□□ 0.75
TMEM50B-205ENST00000459909 TAPT1Q6NXT6 567 aa19.74■□□□□ 0.75
TMEM50B-205ENST00000459909 RNF146Q9NTX7 359 aa19.74■□□□□ 0.75
TMEM50B-205ENST00000459909 POLR3EQ9NVU0 708 aa19.74■□□□□ 0.75
TMEM50B-205ENST00000459909 GREB1LQ9C091 1923 aaPredicted RBP19.74■□□□□ 0.75
TMEM50B-205ENST00000459909 MUC6Q6W4X9 2439 aa19.73■□□□□ 0.75
TMEM50B-205ENST00000459909 IGKV6D-41A0A0C4DH26 115 aa19.73■□□□□ 0.75
TMEM50B-205ENST00000459909 TKFCQ3LXA3 575 aa19.73■□□□□ 0.75
TMEM50B-205ENST00000459909 SBK1Q52WX2 424 aa19.73■□□□□ 0.75
TMEM50B-205ENST00000459909 ANKRD45Q5TZF3 282 aa19.73■□□□□ 0.75
TMEM50B-205ENST00000459909 FBXO16Q8IX29 292 aaPredicted RBP19.73■□□□□ 0.75
TMEM50B-205ENST00000459909 GMCL1P1Q8NEA9 526 aa19.73■□□□□ 0.75
TMEM50B-205ENST00000459909 CCDC136Q96JN2 1154 aa19.73■□□□□ 0.75
TMEM50B-205ENST00000459909 BOLA2Q9H3K6 86 aa19.73■□□□□ 0.75
TMEM50B-205ENST00000459909 PITPNM1O00562 1244 aa19.72■□□□□ 0.75
TMEM50B-205ENST00000459909 CHGBP05060 677 aa19.72■□□□□ 0.75
TMEM50B-205ENST00000459909 TMEM63BQ5T3F8 832 aa19.72■□□□□ 0.75
TMEM50B-205ENST00000459909 B4GALNT3Q6L9W6 998 aa19.72■□□□□ 0.75
TMEM50B-205ENST00000459909 KIAA1211Q6ZU35 1233 aa19.72■□□□□ 0.75
TMEM50B-205ENST00000459909 EEPD1Q7L9B9 569 aa19.72■□□□□ 0.75
TMEM50B-205ENST00000459909 FTOQ9C0B1 505 aaKnown RBP eCLIP19.72■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms