RNA–Protein interactions for RNA: ENST00000459727.5

HDAC3-202, Transcript of histone deacetylase 3, humanhuman

TSL 5

Gene HDAC3, Length 524 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-202ENST00000459727 RAD9BQ6WBX8 426 aa9.91□□□□□ -0.82
HDAC3-202ENST00000459727 CTAGE6Q86UF2 777 aa9.91□□□□□ -0.82
HDAC3-202ENST00000459727 CCDC84Q86UT8 332 aaPredicted RBP9.91□□□□□ -0.82
HDAC3-202ENST00000459727 CTAGE4Q8IX94 777 aa9.91□□□□□ -0.82
HDAC3-202ENST00000459727 TEX11Q8IYF3 940 aa9.91□□□□□ -0.82
HDAC3-202ENST00000459727 FNBP4Q8N3X1 1017 aaPredicted RBP9.91□□□□□ -0.82
HDAC3-202ENST00000459727 MSANTD4Q8NCY6 345 aa9.91□□□□□ -0.82
HDAC3-202ENST00000459727 SH3RF3Q8TEJ3 882 aaPredicted RBP9.91□□□□□ -0.82
HDAC3-202ENST00000459727 P2RX5Q93086 422 aa9.91□□□□□ -0.82
HDAC3-202ENST00000459727 RTFDC1Q9BY42 306 aaPredicted RBP9.91□□□□□ -0.82
HDAC3-202ENST00000459727 BLZF1Q9H2G9 400 aa9.91□□□□□ -0.82
HDAC3-202ENST00000459727 TAB2Q9NYJ8 693 aa9.91□□□□□ -0.82
HDAC3-202ENST00000459727 PRDM4Q9UKN5 801 aa9.91□□□□□ -0.82
HDAC3-202ENST00000459727 STX8Q9UNK0 236 aa9.91□□□□□ -0.82
HDAC3-202ENST00000459727 FHOD1Q9Y613 1164 aa9.91□□□□□ -0.82
HDAC3-202ENST00000459727 STK24Q9Y6E0 443 aa9.91□□□□□ -0.82
HDAC3-202ENST00000459727 FAM205AQ6ZU69 1335 aa9.9□□□□□ -0.82
HDAC3-202ENST00000459727 KDM3AQ9Y4C1 1321 aa9.9□□□□□ -0.82
HDAC3-202ENST00000459727 ANO9A1A5B4 782 aa9.9□□□□□ -0.82
HDAC3-202ENST00000459727 PSMD14O00487 310 aa9.9□□□□□ -0.82
HDAC3-202ENST00000459727 NDUFA10O95299 355 aa9.9□□□□□ -0.82
HDAC3-202ENST00000459727 BTDP43251 543 aa9.9□□□□□ -0.82
HDAC3-202ENST00000459727 CDK8P49336 464 aa9.9□□□□□ -0.82
HDAC3-202ENST00000459727 FXR1P51114 621 aaKnown RBP eCLIP9.9□□□□□ -0.82
HDAC3-202ENST00000459727 FXR2P51116 673 aaKnown RBP eCLIP9.9□□□□□ -0.82
HDAC3-202ENST00000459727 ZBED6P86452 979 aa9.9□□□□□ -0.82
HDAC3-202ENST00000459727 LRRC63Q05C16 580 aa9.9□□□□□ -0.82
HDAC3-202ENST00000459727 PDIA5Q14554 519 aa9.9□□□□□ -0.82
HDAC3-202ENST00000459727 KARSQ15046 597 aaKnown RBP9.9□□□□□ -0.82
HDAC3-202ENST00000459727 IL17AQ16552 155 aa9.9□□□□□ -0.82
HDAC3-202ENST00000459727 MEA1Q16626 185 aa9.9□□□□□ -0.82
HDAC3-202ENST00000459727 INF2Q27J81 1249 aa9.9□□□□□ -0.82
HDAC3-202ENST00000459727 ZNF569Q5MCW4 686 aa9.9□□□□□ -0.82
HDAC3-202ENST00000459727 TTI2Q6NXR4 508 aa9.9□□□□□ -0.82
HDAC3-202ENST00000459727 PROM2Q8N271 834 aa9.9□□□□□ -0.82
HDAC3-202ENST00000459727 CSGALNACT2Q8N6G5 542 aa9.9□□□□□ -0.82
HDAC3-202ENST00000459727 TGFBRAP1Q8WUH2 860 aa9.9□□□□□ -0.82
HDAC3-202ENST00000459727 ARHGEF1Q92888 912 aaKnown RBP9.9□□□□□ -0.82
HDAC3-202ENST00000459727 GPKOWQ92917 476 aaPredicted RBP eCLIP9.9□□□□□ -0.825e-7■■■□□ 17.4
HDAC3-202ENST00000459727 NGLY1Q96IV0 654 aa9.9□□□□□ -0.82
HDAC3-202ENST00000459727 CDK5RAP3Q96JB5 506 aa9.9□□□□□ -0.82
HDAC3-202ENST00000459727 ERGIC2Q96RQ1 377 aa9.9□□□□□ -0.82
HDAC3-202ENST00000459727 CRAMP1Q96RY5 1269 aa9.9□□□□□ -0.82
HDAC3-202ENST00000459727 DESI2Q9BSY9 194 aa9.9□□□□□ -0.82
HDAC3-202ENST00000459727 EDEM3Q9BZQ6 932 aa9.9□□□□□ -0.82
HDAC3-202ENST00000459727 TRIM9Q9C026 710 aa9.9□□□□□ -0.82
HDAC3-202ENST00000459727 NUCKS1Q9H1E3 243 aaKnown RBP9.9□□□□□ -0.82
HDAC3-202ENST00000459727 VPS16Q9H269 839 aa9.9□□□□□ -0.82
HDAC3-202ENST00000459727 MRPL44Q9H9J2 332 aaKnown RBP9.9□□□□□ -0.82
HDAC3-202ENST00000459727 LUC7LQ9NQ29 371 aaKnown RBP9.9□□□□□ -0.82
HDAC3-202ENST00000459727 PRDM10Q9NQV6 1147 aa9.9□□□□□ -0.82
HDAC3-202ENST00000459727 ZNF446Q9NWS9 450 aa9.9□□□□□ -0.82
HDAC3-202ENST00000459727 SRP68Q9UHB9 627 aaKnown RBP9.9□□□□□ -0.82
HDAC3-202ENST00000459727 RAB21Q9UL25 225 aa9.9□□□□□ -0.82
HDAC3-202ENST00000459727 EPN1Q9Y6I3 576 aaPredicted RBP9.9□□□□□ -0.82
HDAC3-202ENST00000459727 KAT6BQ8WYB5 2073 aa9.9□□□□□ -0.82
HDAC3-202ENST00000459727 SNED1Q8TER0 1413 aa9.9□□□□□ -0.83
HDAC3-202ENST00000459727 FLT1P17948 1338 aa9.89□□□□□ -0.83
HDAC3-202ENST00000459727 SMCO2A6NFE2 343 aa9.89□□□□□ -0.83
HDAC3-202ENST00000459727 WNT7AO00755 349 aa9.89□□□□□ -0.83
HDAC3-202ENST00000459727 UFL1O94874 794 aa9.89□□□□□ -0.83
HDAC3-202ENST00000459727 TRIM21P19474 475 aaKnown RBP9.89□□□□□ -0.83
HDAC3-202ENST00000459727 HOXA10P31260 410 aaPredicted RBP9.89□□□□□ -0.83
HDAC3-202ENST00000459727 ADCY7P51828 1080 aa9.89□□□□□ -0.83
HDAC3-202ENST00000459727 ASIC1P78348 528 aa9.89□□□□□ -0.83
HDAC3-202ENST00000459727 GOLGA8FQ08AF8 430 aa9.89□□□□□ -0.83
HDAC3-202ENST00000459727 GOLGA8DPQ0D2H9 430 aa9.89□□□□□ -0.83
HDAC3-202ENST00000459727 NAALADL2Q58DX5 795 aa9.89□□□□□ -0.83
HDAC3-202ENST00000459727 GPATCH4Q5T3I0 446 aaKnown RBP9.89□□□□□ -0.83
HDAC3-202ENST00000459727 SV2BQ7L1I2 683 aa9.89□□□□□ -0.83
HDAC3-202ENST00000459727 HDXQ7Z353 690 aa9.89□□□□□ -0.83
HDAC3-202ENST00000459727 ZSCAN29Q8IWY8 852 aaPredicted RBP9.89□□□□□ -0.83
HDAC3-202ENST00000459727 SMYD4Q8IYR2 804 aaPredicted RBP9.89□□□□□ -0.83
HDAC3-202ENST00000459727 MTRQ99707 1265 aa9.89□□□□□ -0.83
HDAC3-202ENST00000459727 TSG101Q99816 390 aa9.89□□□□□ -0.83
HDAC3-202ENST00000459727 TUBGCP2Q9BSJ2 902 aa9.89□□□□□ -0.83
HDAC3-202ENST00000459727 RIOX1Q9H6W3 641 aa9.89□□□□□ -0.83
HDAC3-202ENST00000459727 CD209Q9NNX6 404 aa9.89□□□□□ -0.83
HDAC3-202ENST00000459727 RIC8AQ9NPQ8 531 aa9.89□□□□□ -0.83
HDAC3-202ENST00000459727 LZTFL1Q9NQ48 299 aa9.89□□□□□ -0.83
HDAC3-202ENST00000459727 TARSL2A2RTX5 802 aaKnown RBP9.88□□□□□ -0.83
HDAC3-202ENST00000459727 EIF3CLB5ME19 914 aaKnown RBP9.88□□□□□ -0.83
HDAC3-202ENST00000459727 CYTH3O43739 400 aa9.88□□□□□ -0.83
HDAC3-202ENST00000459727 KLRC4O43908 158 aa9.88□□□□□ -0.83
HDAC3-202ENST00000459727 CCNT1O60563 726 aaKnown RBP9.88□□□□□ -0.83
HDAC3-202ENST00000459727 USO1O60763 962 aaKnown RBP9.88□□□□□ -0.83
HDAC3-202ENST00000459727 GNA14O95837 355 aa9.88□□□□□ -0.83
HDAC3-202ENST00000459727 PLCG1P19174 1290 aa9.88□□□□□ -0.83
HDAC3-202ENST00000459727 MTIF2P46199 727 aaKnown RBP9.88□□□□□ -0.83
HDAC3-202ENST00000459727 PDE4DQ08499 809 aa9.88□□□□□ -0.83
HDAC3-202ENST00000459727 NFIXQ14938 502 aa9.88□□□□□ -0.83
HDAC3-202ENST00000459727 SPA17Q15506 151 aa9.88□□□□□ -0.83
HDAC3-202ENST00000459727 CALCRLQ16602 461 aa9.88□□□□□ -0.83
HDAC3-202ENST00000459727 SLC27A3Q5K4L6 730 aa9.88□□□□□ -0.83
HDAC3-202ENST00000459727 PPP4R3AQ6IN85 833 aa9.88□□□□□ -0.83
HDAC3-202ENST00000459727 WDR93Q6P2C0 686 aa9.88□□□□□ -0.83
HDAC3-202ENST00000459727 UNC13DQ70J99 1090 aa9.88□□□□□ -0.83
HDAC3-202ENST00000459727 KIAA1328Q86T90 577 aa9.88□□□□□ -0.83
HDAC3-202ENST00000459727 STAG2Q8N3U4 1231 aa9.88□□□□□ -0.83
HDAC3-202ENST00000459727 GUF1Q8N442 669 aaKnown RBP9.88□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms