RNA–Protein interactions for RNA: ENST00000458610.6

CD28-203, Transcript of CD28 molecule, humanhuman

TSL 1 (best) BASIC

Gene CD28, Length 705 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD28-203ENST00000458610 FBXO11Q86XK2 927 aa18.78■□□□□ 0.6
CD28-203ENST00000458610 MCF2L2Q86YR7 1114 aa18.78■□□□□ 0.6
CD28-203ENST00000458610 STAG2Q8N3U4 1231 aa18.78■□□□□ 0.6
CD28-203ENST00000458610 RGS22Q8NE09 1264 aa18.78■□□□□ 0.6
CD28-203ENST00000458610 MPHOSPH6Q99547 160 aaKnown RBP18.78■□□□□ 0.6
CD28-203ENST00000458610 AMNQ9BXJ7 453 aa18.78■□□□□ 0.6
CD28-203ENST00000458610 SENP2Q9HC62 589 aa18.78■□□□□ 0.6
CD28-203ENST00000458610 ADD3Q9UEY8 706 aaKnown RBP18.78■□□□□ 0.6
CD28-203ENST00000458610 MRPL11Q9Y3B7 192 aaKnown RBP18.78■□□□□ 0.6
CD28-203ENST00000458610 KIAA0100Q14667 2235 aaKnown RBP18.77■□□□□ 0.6
CD28-203ENST00000458610 ASB14A6NK59 587 aa18.77■□□□□ 0.6
CD28-203ENST00000458610 B4DLN1 442 aa18.77■□□□□ 0.6
CD28-203ENST00000458610 ZBTB5O15062 677 aa18.77■□□□□ 0.6
CD28-203ENST00000458610 CYBAP13498 195 aa18.77■□□□□ 0.6
CD28-203ENST00000458610 MRPL12P52815 198 aaKnown RBP18.77■□□□□ 0.6
CD28-203ENST00000458610 MUM1L1Q5H9M0 696 aa18.77■□□□□ 0.6
CD28-203ENST00000458610 RNF207Q6ZRF8 634 aa18.77■□□□□ 0.6
CD28-203ENST00000458610 FAM133AQ8N9E0 248 aa18.77■□□□□ 0.6
CD28-203ENST00000458610 USP26Q9BXU7 913 aa18.77■□□□□ 0.6
CD28-203ENST00000458610 CPVLQ9H3G5 476 aa18.77■□□□□ 0.6
CD28-203ENST00000458610 RIOX1Q9H6W3 641 aa18.77■□□□□ 0.6
CD28-203ENST00000458610 CYP39A1Q9NYL5 469 aa18.77■□□□□ 0.6
CD28-203ENST00000458610 DDX20Q9UHI6 824 aaKnown RBP18.77■□□□□ 0.6
CD28-203ENST00000458610 SNX14Q9Y5W7 946 aa18.77■□□□□ 0.6
CD28-203ENST00000458610 LOC102724159A0A0B4J2E5 919 aa18.76■□□□□ 0.59
CD28-203ENST00000458610 PTPDC1A2A3K4 754 aa18.76■□□□□ 0.59
CD28-203ENST00000458610 SEPT4O43236 478 aa18.76■□□□□ 0.59
CD28-203ENST00000458610 PWP2Q15269 919 aaKnown RBP18.76■□□□□ 0.59
CD28-203ENST00000458610 QRICH1Q2TAL8 776 aa18.76■□□□□ 0.59
CD28-203ENST00000458610 ADCK5Q3MIX3 580 aa18.76■□□□□ 0.59
CD28-203ENST00000458610 USH1GQ495M9 461 aa18.76■□□□□ 0.59
CD28-203ENST00000458610 JAKMIP1Q96N16 626 aaKnown RBP18.76■□□□□ 0.59
CD28-203ENST00000458610 OGDHLQ9ULD0 1010 aa18.76■□□□□ 0.59
CD28-203ENST00000458610 FARP2O94887 1054 aaPredicted RBP18.75■□□□□ 0.59
CD28-203ENST00000458610 BAATQ14032 418 aaPredicted RBP18.75■□□□□ 0.59
CD28-203ENST00000458610 SAMD3Q8N6K7 520 aa18.75■□□□□ 0.59
CD28-203ENST00000458610 FANCBQ8NB91 859 aa18.75■□□□□ 0.59
CD28-203ENST00000458610 CLEC4DQ8WXI8 215 aa18.75■□□□□ 0.59
CD28-203ENST00000458610 SHISA4Q96DD7 197 aa18.75■□□□□ 0.59
CD28-203ENST00000458610 MTMR8Q96EF0 704 aa18.75■□□□□ 0.59
CD28-203ENST00000458610 ABHD16BQ9H3Z7 469 aa18.75■□□□□ 0.59
CD28-203ENST00000458610 GPHNQ9NQX3 736 aaPredicted RBP18.75■□□□□ 0.59
CD28-203ENST00000458610 RBBP6Q7Z6E9 1792 aaKnown RBP18.75■□□□□ 0.59
CD28-203ENST00000458610 PNMA6FA0A0J9YX94 578 aa18.74■□□□□ 0.59
CD28-203ENST00000458610 CNTN2Q02246 1040 aa18.74■□□□□ 0.59
CD28-203ENST00000458610 PPP2R5BQ15173 497 aa18.74■□□□□ 0.59
CD28-203ENST00000458610 PRAMEF19Q5SWL8 479 aa18.74■□□□□ 0.59
CD28-203ENST00000458610 LHX8Q68G74 356 aa18.74■□□□□ 0.59
CD28-203ENST00000458610 ARRDC4Q8NCT1 418 aa18.74■□□□□ 0.59
CD28-203ENST00000458610 RRP36Q96EU6 259 aaKnown RBP18.74■□□□□ 0.59
CD28-203ENST00000458610 HTATIP2Q9BUP3 242 aa18.74■□□□□ 0.59
CD28-203ENST00000458610 SPZ1Q9BXG8 430 aa18.74■□□□□ 0.59
CD28-203ENST00000458610 LRRC2Q9BYS8 371 aa18.74■□□□□ 0.59
CD28-203ENST00000458610 CDKN2AIPQ9NXV6 580 aaPredicted RBP18.74■□□□□ 0.59
CD28-203ENST00000458610 MAP3K20Q9NYL2 800 aaKnown RBP18.74■□□□□ 0.59
CD28-203ENST00000458610 FAM184BQ9ULE4 1060 aa18.74■□□□□ 0.59
CD28-203ENST00000458610 PCDHA1Q9Y5I3 950 aa18.74■□□□□ 0.59
CD28-203ENST00000458610 NFIBO00712 420 aa18.73■□□□□ 0.59
CD28-203ENST00000458610 AKR1A1P14550 325 aa18.73■□□□□ 0.59
CD28-203ENST00000458610 CALML3P27482 149 aa18.73■□□□□ 0.59
CD28-203ENST00000458610 RCAN1P53805 252 aa18.73■□□□□ 0.59
CD28-203ENST00000458610 ARMCX2Q7L311 632 aa18.73■□□□□ 0.59
CD28-203ENST00000458610 NECAB2Q7Z6G3 386 aa18.73■□□□□ 0.59
CD28-203ENST00000458610 TRPV1Q8NER1 839 aa18.73■□□□□ 0.59
CD28-203ENST00000458610 MYL10Q9BUA6 226 aa18.73■□□□□ 0.59
CD28-203ENST00000458610 RBM28Q9NW13 759 aaKnown RBP18.73■□□□□ 0.59
CD28-203ENST00000458610 SEC63Q9UGP8 760 aaKnown RBP18.73■□□□□ 0.59
CD28-203ENST00000458610 ZNFX1Q9P2E3 1918 aaKnown RBP18.72■□□□□ 0.59
CD28-203ENST00000458610 SOWAHBA6NEL2 793 aa18.72■□□□□ 0.59
CD28-203ENST00000458610 ZBTB43O43298 467 aa18.72■□□□□ 0.59
CD28-203ENST00000458610 SNAI1O95863 264 aaPredicted RBP18.72■□□□□ 0.59
CD28-203ENST00000458610 RARBP10826 455 aa18.72■□□□□ 0.59
CD28-203ENST00000458610 RPS6P62753 249 aaKnown RBP18.72■□□□□ 0.59
CD28-203ENST00000458610 ACVR2BQ13705 512 aa18.72■□□□□ 0.59
CD28-203ENST00000458610 HOMER1Q86YM7 354 aa18.72■□□□□ 0.59
CD28-203ENST00000458610 CCDC144CPQ8IYA2 1237 aa18.72■□□□□ 0.59
CD28-203ENST00000458610 FBXL16Q8N461 479 aa18.72■□□□□ 0.59
CD28-203ENST00000458610 DNERQ8NFT8 737 aa18.72■□□□□ 0.59
CD28-203ENST00000458610 PIGSQ96S52 555 aa18.72■□□□□ 0.59
CD28-203ENST00000458610 TM6SF1Q9BZW5 370 aa18.72■□□□□ 0.59
CD28-203ENST00000458610 ZHX1Q9UKY1 873 aaPredicted RBP18.72■□□□□ 0.59
CD28-203ENST00000458610 CCDC196A0A1B0GTZ2 297 aa18.71■□□□□ 0.59
CD28-203ENST00000458610 ZNF865P0CJ78 1059 aaPredicted RBP18.71■□□□□ 0.59
CD28-203ENST00000458610 CASTP20810 708 aaKnown RBP18.71■□□□□ 0.59
CD28-203ENST00000458610 RPS6KB1P23443 525 aa18.71■□□□□ 0.59
CD28-203ENST00000458610 APOA5Q6Q788 366 aa18.71■□□□□ 0.59
CD28-203ENST00000458610 Q6ZUG5 572 aa18.71■□□□□ 0.59
CD28-203ENST00000458610 MICU3Q86XE3 530 aa18.71■□□□□ 0.59
CD28-203ENST00000458610 TCEANC2Q96MN5 208 aa18.71■□□□□ 0.59
CD28-203ENST00000458610 CYP46A1Q9Y6A2 500 aa18.71■□□□□ 0.59
CD28-203ENST00000458610 CYTH3O43739 400 aa18.7■□□□□ 0.58
CD28-203ENST00000458610 RUFY3Q7L099 469 aa18.7■□□□□ 0.58
CD28-203ENST00000458610 UBE2Q1Q7Z7E8 422 aa18.7■□□□□ 0.58
CD28-203ENST00000458610 PAWRQ96IZ0 340 aaKnown RBP18.7■□□□□ 0.58
CD28-203ENST00000458610 FGD4Q96M96 766 aa18.7■□□□□ 0.58
CD28-203ENST00000458610 ZSWIM6Q9HCJ5 1215 aa18.7■□□□□ 0.58
CD28-203ENST00000458610 NAP1L2Q9ULW6 460 aaPredicted RBP18.7■□□□□ 0.58
CD28-203ENST00000458610 KLF18A0A0U1RQI7 1052 aa18.69■□□□□ 0.58
CD28-203ENST00000458610 TAL1P17542 331 aaPredicted RBP18.69■□□□□ 0.58
CD28-203ENST00000458610 ALDH5A1P51649 535 aaPredicted RBP18.69■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms