RNA–Protein interactions for RNA: ENST00000458188.2

CLTCL1-204, Transcript of clathrin heavy chain like 1, humanhuman

TSL 3

Gene CLTCL1, Length 574 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1-204ENST00000458188 TRERF1Q96PN7 1200 aa10.03□□□□□ -0.8
CLTCL1-204ENST00000458188 PURBQ96QR8 312 aaKnown RBP10.03□□□□□ -0.8
CLTCL1-204ENST00000458188 AMNQ9BXJ7 453 aa10.03□□□□□ -0.8
CLTCL1-204ENST00000458188 ZCCHC17Q9NP64 241 aaKnown RBP10.03□□□□□ -0.8
CLTCL1-204ENST00000458188 VPS54Q9P1Q0 977 aa10.03□□□□□ -0.8
CLTCL1-204ENST00000458188 MYPNQ86TC9 1320 aa10.03□□□□□ -0.8
CLTCL1-204ENST00000458188 GPR25O00155 361 aa10.02□□□□□ -0.81
CLTCL1-204ENST00000458188 NFIBO00712 420 aa10.02□□□□□ -0.81
CLTCL1-204ENST00000458188 CDKL5O76039 1030 aa10.02□□□□□ -0.81
CLTCL1-204ENST00000458188 HSP90AA1P07900 732 aaKnown RBP10.02□□□□□ -0.81
CLTCL1-204ENST00000458188 SCG2P13521 617 aa10.02□□□□□ -0.81
CLTCL1-204ENST00000458188 GJB2P29033 226 aa10.02□□□□□ -0.81
CLTCL1-204ENST00000458188 CUL4AQ13619 759 aa10.02□□□□□ -0.81
CLTCL1-204ENST00000458188 PFKFB3Q16875 520 aaPredicted RBP10.02□□□□□ -0.81
CLTCL1-204ENST00000458188 FBXO46Q6PJ61 603 aaPredicted RBP10.02□□□□□ -0.81
CLTCL1-204ENST00000458188 RIOX2Q8IUF8 465 aa10.02□□□□□ -0.81
CLTCL1-204ENST00000458188 MB21D1Q8N884 522 aa10.02□□□□□ -0.81
CLTCL1-204ENST00000458188 SMARCC2Q8TAQ2 1214 aa10.02□□□□□ -0.81
CLTCL1-204ENST00000458188 CD99L2Q8TCZ2 262 aa10.02□□□□□ -0.81
CLTCL1-204ENST00000458188 ALG1Q9BT22 464 aa10.02□□□□□ -0.81
CLTCL1-204ENST00000458188 TEX13BQ9BXU2 312 aa10.02□□□□□ -0.81
CLTCL1-204ENST00000458188 RNF26Q9BY78 433 aaPredicted RBP10.02□□□□□ -0.81
CLTCL1-204ENST00000458188 CWC22Q9HCG8 908 aaKnown RBP10.02□□□□□ -0.81
CLTCL1-204ENST00000458188 RNF146Q9NTX7 359 aa10.02□□□□□ -0.81
CLTCL1-204ENST00000458188 MORF4L1Q9UBU8 362 aa10.02□□□□□ -0.81
CLTCL1-204ENST00000458188 KCNJ14Q9UNX9 436 aa10.02□□□□□ -0.81
CLTCL1-204ENST00000458188 SMC3Q9UQE7 1217 aa10.02□□□□□ -0.81
CLTCL1-204ENST00000458188 SMCO2A6NFE2 343 aa10.01□□□□□ -0.81
CLTCL1-204ENST00000458188 STXBP3O00186 592 aa10.01□□□□□ -0.81
CLTCL1-204ENST00000458188 OPLAHO14841 1288 aa10.01□□□□□ -0.81
CLTCL1-204ENST00000458188 DEXIO95424 95 aa10.01□□□□□ -0.81
CLTCL1-204ENST00000458188 PGK2P07205 417 aa10.01□□□□□ -0.81
CLTCL1-204ENST00000458188 FDX1P10109 184 aa10.01□□□□□ -0.81
CLTCL1-204ENST00000458188 HOXA13P31271 388 aaPredicted RBP10.01□□□□□ -0.81
CLTCL1-204ENST00000458188 ANP32AP39687 249 aaKnown RBP10.01□□□□□ -0.81
CLTCL1-204ENST00000458188 PSMC4P43686 418 aa10.01□□□□□ -0.81
CLTCL1-204ENST00000458188 OAZ1P54368 228 aa10.01□□□□□ -0.81
CLTCL1-204ENST00000458188 NAPAP54920 295 aa10.01□□□□□ -0.81
CLTCL1-204ENST00000458188 SP3Q02447 781 aa10.01□□□□□ -0.81
CLTCL1-204ENST00000458188 FAM110CQ1W6H9 321 aa10.01□□□□□ -0.81
CLTCL1-204ENST00000458188 NSMFQ6X4W1 530 aa10.01□□□□□ -0.81
CLTCL1-204ENST00000458188 FAM184AQ8NB25 1140 aa10.01□□□□□ -0.81
CLTCL1-204ENST00000458188 IL27Q8NEV9 243 aa10.01□□□□□ -0.81
CLTCL1-204ENST00000458188 GTF3C2Q8WUA4 911 aaPredicted RBP10.01□□□□□ -0.81
CLTCL1-204ENST00000458188 ZNF296Q8WUU4 475 aaPredicted RBP10.01□□□□□ -0.81
CLTCL1-204ENST00000458188 CLEC4DQ8WXI8 215 aa10.01□□□□□ -0.81
CLTCL1-204ENST00000458188 LLPHQ9BRT6 129 aaKnown RBP10.01□□□□□ -0.81
CLTCL1-204ENST00000458188 DDX49Q9Y6V7 483 aaKnown RBP10.01□□□□□ -0.81
CLTCL1-204ENST00000458188 MYH4Q9Y623 1939 aa10.01□□□□□ -0.81
CLTCL1-204ENST00000458188 ATP2A1O14983 1001 aa10□□□□□ -0.81
CLTCL1-204ENST00000458188 CFBP00751 764 aa10□□□□□ -0.81
CLTCL1-204ENST00000458188 CALML3P27482 149 aa10□□□□□ -0.81
CLTCL1-204ENST00000458188 NLRP5P59047 1200 aa10□□□□□ -0.81
CLTCL1-204ENST00000458188 CCNA1P78396 465 aa10□□□□□ -0.81
CLTCL1-204ENST00000458188 LACTBP83111 547 aaPredicted RBP10□□□□□ -0.81
CLTCL1-204ENST00000458188 BAATQ14032 418 aaPredicted RBP10□□□□□ -0.81
CLTCL1-204ENST00000458188 BECN1Q14457 450 aa10□□□□□ -0.81
CLTCL1-204ENST00000458188 UBE2SQ16763 222 aa10□□□□□ -0.81
CLTCL1-204ENST00000458188 USP17L6PQ6QN14 398 aa10□□□□□ -0.81
CLTCL1-204ENST00000458188 GPR142Q7Z601 462 aa10□□□□□ -0.81
CLTCL1-204ENST00000458188 ANKRD35Q8N283 1001 aa10□□□□□ -0.81
CLTCL1-204ENST00000458188 ZFP91Q96JP5 570 aaPredicted RBP10□□□□□ -0.81
CLTCL1-204ENST00000458188 PGBD1Q96JS3 809 aa10□□□□□ -0.81
CLTCL1-204ENST00000458188 TMEM260Q9NX78 707 aa10□□□□□ -0.81
CLTCL1-204ENST00000458188 BARHL2Q9NY43 387 aa10□□□□□ -0.81
CLTCL1-204ENST00000458188 BIN2Q9UBW5 565 aaPredicted RBP10□□□□□ -0.81
CLTCL1-204ENST00000458188 MRPL11Q9Y3B7 192 aaKnown RBP10□□□□□ -0.81
CLTCL1-204ENST00000458188 ZSCAN21Q9Y5A6 473 aaPredicted RBP10□□□□□ -0.81
CLTCL1-204ENST00000458188 ABCB11O95342 1321 aa10□□□□□ -0.81
CLTCL1-204ENST00000458188 LOC285556D6RIA3 1793 aa9.99□□□□□ -0.81
CLTCL1-204ENST00000458188 TNPO2O14787 897 aaKnown RBP9.99□□□□□ -0.81
CLTCL1-204ENST00000458188 FKTNO75072 461 aa9.99□□□□□ -0.81
CLTCL1-204ENST00000458188 SLC25A27O95847 323 aa9.99□□□□□ -0.81
CLTCL1-204ENST00000458188 CNTN2Q02246 1040 aa9.99□□□□□ -0.81
CLTCL1-204ENST00000458188 FOXD4L5Q5VV16 416 aaPredicted RBP9.99□□□□□ -0.81
CLTCL1-204ENST00000458188 SLC30A10Q6XR72 485 aa9.99□□□□□ -0.81
CLTCL1-204ENST00000458188 PLEKHH3Q7Z736 793 aa9.99□□□□□ -0.81
CLTCL1-204ENST00000458188 FCHSD1Q86WN1 690 aa9.99□□□□□ -0.81
CLTCL1-204ENST00000458188 SLC17A8Q8NDX2 589 aa9.99□□□□□ -0.81
CLTCL1-204ENST00000458188 RASGRP4Q8TDF6 673 aa9.99□□□□□ -0.81
CLTCL1-204ENST00000458188 OXER1Q8TDS5 423 aa9.99□□□□□ -0.81
CLTCL1-204ENST00000458188 FOXD4L4Q8WXT5 416 aaPredicted RBP9.99□□□□□ -0.81
CLTCL1-204ENST00000458188 TRIM47Q96LD4 638 aa9.99□□□□□ -0.81
CLTCL1-204ENST00000458188 MMP19Q99542 508 aa9.99□□□□□ -0.81
CLTCL1-204ENST00000458188 CFHR5Q9BXR6 569 aa9.99□□□□□ -0.81
CLTCL1-204ENST00000458188 MROH8Q9H579 483 aa9.99□□□□□ -0.81
CLTCL1-204ENST00000458188 ACAD9Q9H845 621 aa9.99□□□□□ -0.81
CLTCL1-204ENST00000458188 PSTPIP2Q9H939 334 aa9.99□□□□□ -0.81
CLTCL1-204ENST00000458188 A1CFQ9NQ94 594 aaKnown RBP9.99□□□□□ -0.81
CLTCL1-204ENST00000458188 GABRQQ9UN88 632 aa9.99□□□□□ -0.81
CLTCL1-204ENST00000458188 STK36Q9NRP7 1315 aa9.99□□□□□ -0.81
CLTCL1-204ENST00000458188 COBLO75128 1261 aa9.98□□□□□ -0.81
CLTCL1-204ENST00000458188 FCER1AP12319 257 aa9.98□□□□□ -0.81
CLTCL1-204ENST00000458188 CYP2B6P20813 491 aa9.98□□□□□ -0.81
CLTCL1-204ENST00000458188 PTPREP23469 700 aa9.98□□□□□ -0.81
CLTCL1-204ENST00000458188 ADORA2AP29274 412 aa9.98□□□□□ -0.81
CLTCL1-204ENST00000458188 MAPK4P31152 587 aa9.98□□□□□ -0.81
CLTCL1-204ENST00000458188 ADCY7P51828 1080 aa9.98□□□□□ -0.81
CLTCL1-204ENST00000458188 FCGRTP55899 365 aa9.98□□□□□ -0.81
CLTCL1-204ENST00000458188 RPS6P62753 249 aaKnown RBP9.98□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms