RNA–Protein interactions for RNA: ENST00000457461.1

CUBNP3-201, Transcript of cubilin pseudogene 3, humanhuman

BASIC

Gene CUBNP3, Length 1,784 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUBNP3-201ENST00000457461 PUF60Q9UHX1 559 aaKnown RBP7.64□□□□□ -1.19
CUBNP3-201ENST00000457461 SCN9AQ15858 1988 aa7.63□□□□□ -1.19
CUBNP3-201ENST00000457461 DDX60LQ5H9U9 1706 aaKnown RBP7.63□□□□□ -1.19
CUBNP3-201ENST00000457461 SH3BP5O60239 455 aa7.63□□□□□ -1.19
CUBNP3-201ENST00000457461 UFL1O94874 794 aa7.63□□□□□ -1.19
CUBNP3-201ENST00000457461 FOSL1P15407 271 aa7.63□□□□□ -1.19
CUBNP3-201ENST00000457461 CASTP20810 708 aaKnown RBP7.63□□□□□ -1.19
CUBNP3-201ENST00000457461 PSMA5P28066 241 aa7.63□□□□□ -1.19
CUBNP3-201ENST00000457461 ARHGAP25P42331 645 aa7.63□□□□□ -1.19
CUBNP3-201ENST00000457461 SLC7A5Q01650 507 aa7.63□□□□□ -1.19
CUBNP3-201ENST00000457461 IFFO1Q0D2I5 559 aa7.63□□□□□ -1.19
CUBNP3-201ENST00000457461 PTPN14Q15678 1187 aa7.63□□□□□ -1.19
CUBNP3-201ENST00000457461 USH1GQ495M9 461 aa7.63□□□□□ -1.19
CUBNP3-201ENST00000457461 RUFY3Q7L099 469 aa7.63□□□□□ -1.19
CUBNP3-201ENST00000457461 ZNF804AQ7Z570 1209 aa7.63□□□□□ -1.19
CUBNP3-201ENST00000457461 PEX5LQ8IYB4 626 aa7.63□□□□□ -1.19
CUBNP3-201ENST00000457461 MAGEB6Q8N7X4 407 aa7.63□□□□□ -1.19
CUBNP3-201ENST00000457461 NEK9Q8TD19 979 aa7.63□□□□□ -1.19
CUBNP3-201ENST00000457461 NACC2Q96BF6 587 aa7.63□□□□□ -1.19
CUBNP3-201ENST00000457461 CDK5RAP3Q96JB5 506 aa7.63□□□□□ -1.19
CUBNP3-201ENST00000457461 TMX3Q96JJ7 454 aa7.63□□□□□ -1.19
CUBNP3-201ENST00000457461 PAGR1Q9BTK6 254 aa7.63□□□□□ -1.19
CUBNP3-201ENST00000457461 UPF3BQ9BZI7 483 aaKnown RBP7.63□□□□□ -1.19
CUBNP3-201ENST00000457461 BHMT2Q9H2M3 363 aa7.63□□□□□ -1.19
CUBNP3-201ENST00000457461 EIF4ENIF1Q9NRA8 985 aaKnown RBP7.63□□□□□ -1.19
CUBNP3-201ENST00000457461 ORC3Q9UBD5 711 aaPredicted RBP7.63□□□□□ -1.19
CUBNP3-201ENST00000457461 IQSEC3Q9UPP2 1182 aaPredicted RBP7.63□□□□□ -1.19
CUBNP3-201ENST00000457461 H0YIN7 160 aa7.62□□□□□ -1.19
CUBNP3-201ENST00000457461 MTRF1O75570 445 aaKnown RBP7.62□□□□□ -1.19
CUBNP3-201ENST00000457461 FGAP02671 866 aa7.62□□□□□ -1.19
CUBNP3-201ENST00000457461 MCM3P25205 808 aa7.62□□□□□ -1.19
CUBNP3-201ENST00000457461 FNTAP49354 379 aa7.62□□□□□ -1.19
CUBNP3-201ENST00000457461 NEK2P51955 445 aa7.62□□□□□ -1.19
CUBNP3-201ENST00000457461 PHEXP78562 749 aa7.62□□□□□ -1.19
CUBNP3-201ENST00000457461 PDAP1Q13442 181 aaKnown RBP7.62□□□□□ -1.19
CUBNP3-201ENST00000457461 COL9A3Q14050 684 aaPredicted RBP7.62□□□□□ -1.19
CUBNP3-201ENST00000457461 BRD3Q15059 726 aa7.62□□□□□ -1.19
CUBNP3-201ENST00000457461 CNGA3Q16281 694 aa7.62□□□□□ -1.19
CUBNP3-201ENST00000457461 STOX1Q6ZVD7 989 aa7.62□□□□□ -1.19
CUBNP3-201ENST00000457461 C2CD5Q86YS7 1000 aa7.62□□□□□ -1.19
CUBNP3-201ENST00000457461 ZGPATQ8N5A5 531 aaKnown RBP7.62□□□□□ -1.19
CUBNP3-201ENST00000457461 TMEM87AQ8NBN3 555 aa7.62□□□□□ -1.19
CUBNP3-201ENST00000457461 WDR66Q8TBY9 1149 aa7.62□□□□□ -1.19
CUBNP3-201ENST00000457461 LMBR1Q8WVP7 490 aa7.62□□□□□ -1.19
CUBNP3-201ENST00000457461 C7orf43Q8WVR3 580 aa7.62□□□□□ -1.19
CUBNP3-201ENST00000457461 NSUN4Q96CB9 384 aaKnown RBP7.62□□□□□ -1.19
CUBNP3-201ENST00000457461 ZBTB10Q96DT7 871 aa7.62□□□□□ -1.19
CUBNP3-201ENST00000457461 JAKMIP1Q96N16 626 aaKnown RBP7.62□□□□□ -1.19
CUBNP3-201ENST00000457461 RUFY1Q96T51 708 aa7.62□□□□□ -1.19
CUBNP3-201ENST00000457461 SENP7Q9BQF6 1050 aa7.62□□□□□ -1.19
CUBNP3-201ENST00000457461 RIOK1Q9BRS2 568 aaKnown RBP7.62□□□□□ -1.19
CUBNP3-201ENST00000457461 CD209Q9NNX6 404 aa7.62□□□□□ -1.19
CUBNP3-201ENST00000457461 ARFGAP3Q9NP61 516 aa7.62□□□□□ -1.19
CUBNP3-201ENST00000457461 CIDEBQ9UHD4 219 aa7.62□□□□□ -1.19
CUBNP3-201ENST00000457461 RABL2BQ9UNT1 228 aa7.62□□□□□ -1.19
CUBNP3-201ENST00000457461 NSFL1CQ9UNZ2 370 aaKnown RBP7.62□□□□□ -1.19
CUBNP3-201ENST00000457461 TMED5Q9Y3A6 229 aa7.62□□□□□ -1.19
CUBNP3-201ENST00000457461 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP7.62□□□□□ -1.19
CUBNP3-201ENST00000457461 CYP46A1Q9Y6A2 500 aa7.62□□□□□ -1.19
CUBNP3-201ENST00000457461 NAV1Q8NEY1 1877 aa7.62□□□□□ -1.19
CUBNP3-201ENST00000457461 FAM205AQ6ZU69 1335 aa7.62□□□□□ -1.19
CUBNP3-201ENST00000457461 FER1L6Q2WGJ9 1857 aa7.61□□□□□ -1.19
CUBNP3-201ENST00000457461 CCDC151A5D8V7 595 aa7.61□□□□□ -1.19
CUBNP3-201ENST00000457461 LRRC10BA6NIK2 292 aa7.61□□□□□ -1.19
CUBNP3-201ENST00000457461 EBAG9O00559 213 aa7.61□□□□□ -1.19
CUBNP3-201ENST00000457461 CREB3O43889 395 aa7.61□□□□□ -1.19
CUBNP3-201ENST00000457461 MBD4O95243 580 aa7.61□□□□□ -1.19
CUBNP3-201ENST00000457461 MMEP08473 750 aa7.61□□□□□ -1.19
CUBNP3-201ENST00000457461 GNAT2P19087 354 aa7.61□□□□□ -1.19
CUBNP3-201ENST00000457461 TRIM21P19474 475 aaKnown RBP7.61□□□□□ -1.19
CUBNP3-201ENST00000457461 RPS6KB1P23443 525 aa7.61□□□□□ -1.19
CUBNP3-201ENST00000457461 EIF4BP23588 611 aaKnown RBP7.61□□□□□ -1.19
CUBNP3-201ENST00000457461 INPP5BP32019 993 aa7.61□□□□□ -1.19
CUBNP3-201ENST00000457461 SNX1Q13596 522 aa7.61□□□□□ -1.19
CUBNP3-201ENST00000457461 CUL3Q13618 768 aa7.61□□□□□ -1.19
CUBNP3-201ENST00000457461 Q4G0T1 1027 aa7.61□□□□□ -1.19
CUBNP3-201ENST00000457461 CAPRIN2Q6IMN6 1127 aaKnown RBP7.61□□□□□ -1.19
CUBNP3-201ENST00000457461 ADGRA1Q86SQ6 560 aa7.61□□□□□ -1.19
CUBNP3-201ENST00000457461 FBXL16Q8N461 479 aa7.61□□□□□ -1.19
CUBNP3-201ENST00000457461 TRIM58Q8NG06 486 aa7.61□□□□□ -1.19
CUBNP3-201ENST00000457461 FAM71BQ8TC56 605 aa7.61□□□□□ -1.19
CUBNP3-201ENST00000457461 CNKSR1Q969H4 720 aa7.61□□□□□ -1.19
CUBNP3-201ENST00000457461 CCDC47Q96A33 483 aaKnown RBP7.61□□□□□ -1.19
CUBNP3-201ENST00000457461 SPDL1Q96EA4 605 aa7.61□□□□□ -1.19
CUBNP3-201ENST00000457461 INTS4Q96HW7 963 aaKnown RBP7.61□□□□□ -1.19
CUBNP3-201ENST00000457461 GORASP1Q9BQQ3 440 aa7.61□□□□□ -1.19
CUBNP3-201ENST00000457461 MOV10L1Q9BXT6 1211 aaKnown RBP7.61□□□□□ -1.19
CUBNP3-201ENST00000457461 RTFDC1Q9BY42 306 aaPredicted RBP7.61□□□□□ -1.19
CUBNP3-201ENST00000457461 AGXT2Q9BYV1 514 aa7.61□□□□□ -1.19
CUBNP3-201ENST00000457461 TRIM4Q9C037 500 aa7.61□□□□□ -1.19
CUBNP3-201ENST00000457461 RSPH9Q9H1X1 276 aaPredicted RBP7.61□□□□□ -1.19
CUBNP3-201ENST00000457461 PCDH18Q9HCL0 1135 aa7.61□□□□□ -1.19
CUBNP3-201ENST00000457461 EPB41L4AQ9HCS5 686 aaPredicted RBP7.61□□□□□ -1.19
CUBNP3-201ENST00000457461 DNAAF2Q9NVR5 837 aaKnown RBP7.61□□□□□ -1.19
CUBNP3-201ENST00000457461 LRP2BPQ9P2M1 347 aa7.61□□□□□ -1.19
CUBNP3-201ENST00000457461 ECM29Q5VYK3 1845 aa7.61□□□□□ -1.19
CUBNP3-201ENST00000457461 A0A0G2JLW4 131 aa7.61□□□□□ -1.19
CUBNP3-201ENST00000457461 GSG1L2A8MUP6 293 aa7.61□□□□□ -1.19
CUBNP3-201ENST00000457461 MYO1BO43795 1136 aa7.61□□□□□ -1.19
CUBNP3-201ENST00000457461 TBC1D12O60347 775 aa7.61□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 53 ms