RNA–Protein interactions for RNA: ENST00000457312.1

SF3B4-202, Transcript of splicing factor 3b subunit 4, humanhuman

TSL 5

Gene SF3B4, Length 826 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B4-202ENST00000457312 ARMCX2Q7L311 632 aa19.77■□□□□ 0.76
SF3B4-202ENST00000457312 FBXO28Q9NVF7 368 aa19.77■□□□□ 0.76
SF3B4-202ENST00000457312 GNEQ9Y223 722 aaKnown RBP19.77■□□□□ 0.76
SF3B4-202ENST00000457312 USP24Q9UPU5 2620 aa19.77■□□□□ 0.76
SF3B4-202ENST00000457312 VWA5AO00534 786 aa19.76■□□□□ 0.75
SF3B4-202ENST00000457312 MBTPS2O43462 519 aa19.76■□□□□ 0.75
SF3B4-202ENST00000457312 GJB5O95377 273 aa19.76■□□□□ 0.75
SF3B4-202ENST00000457312 IQCF3P0C7M6 154 aa19.76■□□□□ 0.75
SF3B4-202ENST00000457312 SUPT20HL2P0C7V6 817 aa19.76■□□□□ 0.75
SF3B4-202ENST00000457312 DYNLL1P63167 89 aaKnown RBP19.76■□□□□ 0.75
SF3B4-202ENST00000457312 DGLUCYQ7Z3D6 616 aa19.76■□□□□ 0.75
SF3B4-202ENST00000457312 ADSSL1Q8N142 457 aa19.76■□□□□ 0.75
SF3B4-202ENST00000457312 BANK1Q8NDB2 785 aa19.76■□□□□ 0.75
SF3B4-202ENST00000457312 RMDN1Q96DB5 314 aa19.76■□□□□ 0.75
SF3B4-202ENST00000457312 C17orf80Q9BSJ5 609 aa19.76■□□□□ 0.75
SF3B4-202ENST00000457312 CLDND1Q9NY35 253 aa19.76■□□□□ 0.75
SF3B4-202ENST00000457312 MICAL3Q7RTP6 2002 aa19.76■□□□□ 0.75
SF3B4-202ENST00000457312 WDR46O15213 610 aaKnown RBP19.75■□□□□ 0.75
SF3B4-202ENST00000457312 CLUL1Q15846 466 aa19.75■□□□□ 0.75
SF3B4-202ENST00000457312 RPAINQ86UA6 219 aa19.75■□□□□ 0.75
SF3B4-202ENST00000457312 DDX11Q96FC9 970 aa19.75■□□□□ 0.75
SF3B4-202ENST00000457312 ASIC4Q96FT7 647 aa19.75■□□□□ 0.75
SF3B4-202ENST00000457312 RAD9AQ99638 391 aa19.75■□□□□ 0.75
SF3B4-202ENST00000457312 CTNNA3Q9UI47 895 aa19.75■□□□□ 0.75
SF3B4-202ENST00000457312 PITPNM1O00562 1244 aa19.74■□□□□ 0.75
SF3B4-202ENST00000457312 KDM4AO75164 1064 aa19.74■□□□□ 0.75
SF3B4-202ENST00000457312 TNFAIP2Q03169 654 aa19.74■□□□□ 0.75
SF3B4-202ENST00000457312 SIGLEC14Q08ET2 396 aa19.74■□□□□ 0.75
SF3B4-202ENST00000457312 PTPROQ16827 1216 aa19.74■□□□□ 0.75
SF3B4-202ENST00000457312 CLEC10AQ8IUN9 316 aa19.74■□□□□ 0.75
SF3B4-202ENST00000457312 PPIL4Q8WUA2 492 aaKnown RBP eCLIP19.74■□□□□ 0.75
SF3B4-202ENST00000457312 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP19.74■□□□□ 0.75
SF3B4-202ENST00000457312 STXBP3O00186 592 aa19.73■□□□□ 0.75
SF3B4-202ENST00000457312 GALR2O43603 387 aaPredicted RBP19.73■□□□□ 0.75
SF3B4-202ENST00000457312 ZEB2O60315 1214 aa19.73■□□□□ 0.75
SF3B4-202ENST00000457312 NOL8Q76FK4 1167 aaKnown RBP19.73■□□□□ 0.75
SF3B4-202ENST00000457312 VCPKMTQ9H867 229 aa19.73■□□□□ 0.75
SF3B4-202ENST00000457312 PPP1R9AQ9ULJ8 1098 aa19.73■□□□□ 0.75
SF3B4-202ENST00000457312 MPHOSPH10O00566 681 aaKnown RBP19.72■□□□□ 0.75
SF3B4-202ENST00000457312 PLCD1P51178 756 aa19.72■□□□□ 0.75
SF3B4-202ENST00000457312 NUBP1P53384 320 aa19.72■□□□□ 0.75
SF3B4-202ENST00000457312 TTC6Q86TZ1 520 aa19.72■□□□□ 0.75
SF3B4-202ENST00000457312 CCDC144CPQ8IYA2 1237 aa19.72■□□□□ 0.75
SF3B4-202ENST00000457312 NKD2Q969F2 451 aaPredicted RBP19.72■□□□□ 0.75
SF3B4-202ENST00000457312 NSUN3Q9H649 340 aaKnown RBP19.72■□□□□ 0.75
SF3B4-202ENST00000457312 COPRSQ9NQ92 184 aa19.72■□□□□ 0.75
SF3B4-202ENST00000457312 AKAP2Q9Y2D5 859 aa19.72■□□□□ 0.75
SF3B4-202ENST00000457312 FAM208BQ5VWN6 2430 aa19.72■□□□□ 0.75
SF3B4-202ENST00000457312 GABPAQ06546 454 aa19.71■□□□□ 0.75
SF3B4-202ENST00000457312 DLX2Q07687 328 aaPredicted RBP19.71■□□□□ 0.75
SF3B4-202ENST00000457312 TFCP2Q12800 502 aa19.71■□□□□ 0.75
SF3B4-202ENST00000457312 SMAD4Q13485 552 aaKnown RBP19.71■□□□□ 0.75
SF3B4-202ENST00000457312 SIAH1Q8IUQ4 282 aa19.71■□□□□ 0.75
SF3B4-202ENST00000457312 TMX2Q9Y320 296 aa19.71■□□□□ 0.75
SF3B4-202ENST00000457312 RIPK3Q9Y572 518 aa19.71■□□□□ 0.75
SF3B4-202ENST00000457312 RALGAPA2Q2PPJ7 1873 aa19.71■□□□□ 0.75
SF3B4-202ENST00000457312 FASNP49327 2511 aaKnown RBP19.7■□□□□ 0.74
SF3B4-202ENST00000457312 USP5P45974 858 aa19.7■□□□□ 0.74
SF3B4-202ENST00000457312 CTC1Q2NKJ3 1217 aa19.7■□□□□ 0.74
SF3B4-202ENST00000457312 SNRNP48Q6IEG0 339 aaKnown RBP19.7■□□□□ 0.74
SF3B4-202ENST00000457312 FRMD5Q7Z6J6 570 aa19.7■□□□□ 0.74
SF3B4-202ENST00000457312 RETREG2Q8NC44 543 aa19.7■□□□□ 0.74
SF3B4-202ENST00000457312 TEX13BQ9BXU2 312 aa19.7■□□□□ 0.74
SF3B4-202ENST00000457312 AP5M1Q9H0R1 490 aa19.7■□□□□ 0.74
SF3B4-202ENST00000457312 DYNC1LI2O43237 492 aaPredicted RBP19.69■□□□□ 0.74
SF3B4-202ENST00000457312 SMPD1P17405 629 aa19.69■□□□□ 0.74
SF3B4-202ENST00000457312 DHX30Q7L2E3 1194 aaKnown RBP eCLIP19.69■□□□□ 0.74
SF3B4-202ENST00000457312 NEUROD6Q96NK8 337 aa19.69■□□□□ 0.74
SF3B4-202ENST00000457312 CRBNQ96SW2 442 aa19.69■□□□□ 0.74
SF3B4-202ENST00000457312 EVX2Q03828 476 aa19.68■□□□□ 0.74
SF3B4-202ENST00000457312 GPNMBQ14956 572 aa19.68■□□□□ 0.74
SF3B4-202ENST00000457312 TCTN1Q2MV58 587 aa19.68■□□□□ 0.74
SF3B4-202ENST00000457312 TMEM179Q6ZVK1 233 aa19.68■□□□□ 0.74
SF3B4-202ENST00000457312 ARHGEF10LQ9HCE6 1279 aa19.68■□□□□ 0.74
SF3B4-202ENST00000457312 LOC730098B7Z3J9 87 aa19.67■□□□□ 0.74
SF3B4-202ENST00000457312 TBX10O75333 385 aa19.67■□□□□ 0.74
SF3B4-202ENST00000457312 ICA1Q05084 483 aa19.67■□□□□ 0.74
SF3B4-202ENST00000457312 COL9A2Q14055 689 aaPredicted RBP19.67■□□□□ 0.74
SF3B4-202ENST00000457312 GORABQ5T7V8 394 aa19.67■□□□□ 0.74
SF3B4-202ENST00000457312 FAM117BQ6P1L5 589 aa19.67■□□□□ 0.74
SF3B4-202ENST00000457312 SH2D4AQ9H788 454 aa19.67■□□□□ 0.74
SF3B4-202ENST00000457312 SNRKQ9NRH2 765 aa19.67■□□□□ 0.74
SF3B4-202ENST00000457312 PDGFBP01127 241 aaPredicted RBP19.66■□□□□ 0.74
SF3B4-202ENST00000457312 CBX2Q14781 532 aaPredicted RBP19.66■□□□□ 0.74
SF3B4-202ENST00000457312 EPC2Q52LR7 807 aa19.66■□□□□ 0.74
SF3B4-202ENST00000457312 MCTP2Q6DN12 878 aa19.66■□□□□ 0.74
SF3B4-202ENST00000457312 CNKSR3Q6P9H4 555 aa19.66■□□□□ 0.74
SF3B4-202ENST00000457312 MIGA1Q8NAN2 632 aa19.66■□□□□ 0.74
SF3B4-202ENST00000457312 H3BNC9 293 aa19.65■□□□□ 0.74
SF3B4-202ENST00000457312 NCK2O43639 380 aa19.65■□□□□ 0.74
SF3B4-202ENST00000457312 UQCRFS1P1P0C7P4 283 aa19.65■□□□□ 0.74
SF3B4-202ENST00000457312 BFSP2Q13515 415 aa19.65■□□□□ 0.74
SF3B4-202ENST00000457312 LRRFIP1Q32MZ4 808 aaKnown RBP19.65■□□□□ 0.74
SF3B4-202ENST00000457312 TMEM63BQ5T3F8 832 aa19.65■□□□□ 0.74
SF3B4-202ENST00000457312 COL26A1Q96A83 441 aa19.65■□□□□ 0.74
SF3B4-202ENST00000457312 ANKRD11Q6UB99 2663 aaPredicted RBP19.65■□□□□ 0.74
SF3B4-202ENST00000457312 LCTP09848 1927 aa19.64■□□□□ 0.74
SF3B4-202ENST00000457312 CYP2E1P05181 493 aaPredicted RBP19.64■□□□□ 0.73
SF3B4-202ENST00000457312 PURAQ00577 322 aaKnown RBP19.64■□□□□ 0.73
SF3B4-202ENST00000457312 GPM6BQ13491 265 aa19.64■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms