RNA–Protein interactions for RNA: ENST00000456581.1

LINC00959-201, Transcript of HCG1648656, isoform CRA_a, humanhuman

TSL 2

Gene LINC00959, Length 2,843 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00959-201ENST00000456581 UBA5Q9GZZ9 404 aa14□□□□□ -0.17
LINC00959-201ENST00000456581 ARFGAP3Q9NP61 516 aa14□□□□□ -0.17
LINC00959-201ENST00000456581 ADD3Q9UEY8 706 aaKnown RBP14□□□□□ -0.17
LINC00959-201ENST00000456581 PDE6BP35913 854 aa13.99□□□□□ -0.17
LINC00959-201ENST00000456581 LMAN1P49257 510 aa13.99□□□□□ -0.17
LINC00959-201ENST00000456581 GRM4Q14833 912 aa13.99□□□□□ -0.17
LINC00959-201ENST00000456581 TTC38Q5R3I4 469 aa13.99□□□□□ -0.17
LINC00959-201ENST00000456581 GPR161Q8N6U8 529 aaKnown RBP13.99□□□□□ -0.17
LINC00959-201ENST00000456581 USP40Q9NVE5 1235 aa13.99□□□□□ -0.17
LINC00959-201ENST00000456581 ADAM21Q9UKJ8 722 aa13.99□□□□□ -0.17
LINC00959-201ENST00000456581 LRRC37AA6NMS7 1700 aa13.99□□□□□ -0.17
LINC00959-201ENST00000456581 QSER1Q2KHR3 1735 aa13.99□□□□□ -0.17
LINC00959-201ENST00000456581 CCDC66A2RUB6 948 aa13.99□□□□□ -0.17
LINC00959-201ENST00000456581 KLRF2D3W0D1 207 aa13.99□□□□□ -0.17
LINC00959-201ENST00000456581 TCP10Q12799 353 aa13.99□□□□□ -0.17
LINC00959-201ENST00000456581 IL17AQ16552 155 aa13.99□□□□□ -0.17
LINC00959-201ENST00000456581 LRRC47Q8N1G4 583 aaKnown RBP13.99□□□□□ -0.17
LINC00959-201ENST00000456581 NOA1Q8NC60 698 aaKnown RBP13.99□□□□□ -0.17
LINC00959-201ENST00000456581 SPATA20Q8TB22 786 aa13.99□□□□□ -0.17
LINC00959-201ENST00000456581 GOLGA1Q92805 767 aa13.99□□□□□ -0.17
LINC00959-201ENST00000456581 AKR1B1P15121 316 aa13.98□□□□□ -0.17
LINC00959-201ENST00000456581 ALDH1B1P30837 517 aa13.98□□□□□ -0.17
LINC00959-201ENST00000456581 KIF4BQ2VIQ3 1234 aa13.98□□□□□ -0.17
LINC00959-201ENST00000456581 NCAPH2Q6IBW4 605 aa13.98□□□□□ -0.17
LINC00959-201ENST00000456581 TMED8Q6PL24 325 aaPredicted RBP13.98□□□□□ -0.17
LINC00959-201ENST00000456581 SLF1Q9BQI6 1058 aa13.98□□□□□ -0.17
LINC00959-201ENST00000456581 TRIM34Q9BYJ4 488 aa13.98□□□□□ -0.17
LINC00959-201ENST00000456581 GDAQ9Y2T3 454 aa13.98□□□□□ -0.17
LINC00959-201ENST00000456581 SLX4Q8IY92 1834 aa13.98□□□□□ -0.17
LINC00959-201ENST00000456581 FRMPD2Q68DX3 1309 aaPredicted RBP13.98□□□□□ -0.17
LINC00959-201ENST00000456581 SCN9AQ15858 1988 aa13.98□□□□□ -0.17
LINC00959-201ENST00000456581 TRIM49BA6NDI0 452 aa13.98□□□□□ -0.17
LINC00959-201ENST00000456581 USP17L5A8MUK1 530 aa13.98□□□□□ -0.17
LINC00959-201ENST00000456581 TULP2O00295 520 aa13.98□□□□□ -0.17
LINC00959-201ENST00000456581 ENC1O14682 589 aa13.98□□□□□ -0.17
LINC00959-201ENST00000456581 MFAP3LO75121 409 aa13.98□□□□□ -0.17
LINC00959-201ENST00000456581 PLCG2P16885 1265 aa13.98□□□□□ -0.17
LINC00959-201ENST00000456581 SPATA1Q5VX52 437 aa13.98□□□□□ -0.17
LINC00959-201ENST00000456581 CDC42EP5Q6NZY7 148 aa13.98□□□□□ -0.17
LINC00959-201ENST00000456581 NEDD1Q8NHV4 660 aa13.98□□□□□ -0.17
LINC00959-201ENST00000456581 ANKS1AQ92625 1134 aa13.98□□□□□ -0.17
LINC00959-201ENST00000456581 BRMS1Q9HCU9 246 aa13.98□□□□□ -0.17
LINC00959-201ENST00000456581 ABCB6Q9NP58 842 aa13.98□□□□□ -0.17
LINC00959-201ENST00000456581 CEP131Q9UPN4 1083 aa13.98□□□□□ -0.17
LINC00959-201ENST00000456581 ZMYND10O75800 440 aa13.97□□□□□ -0.17
LINC00959-201ENST00000456581 TUBB4AP04350 444 aa13.97□□□□□ -0.17
LINC00959-201ENST00000456581 TXLNAP40222 546 aa13.97□□□□□ -0.17
LINC00959-201ENST00000456581 KRT31Q15323 416 aa13.97□□□□□ -0.17
LINC00959-201ENST00000456581 APOBEC3HQ6NTF7 200 aaKnown RBP13.97□□□□□ -0.17
LINC00959-201ENST00000456581 CHP1Q99653 195 aa13.97□□□□□ -0.17
LINC00959-201ENST00000456581 HDAC6Q9UBN7 1215 aa13.97□□□□□ -0.17
LINC00959-201ENST00000456581 PALM3A6NDB9 673 aaPredicted RBP13.97□□□□□ -0.17
LINC00959-201ENST00000456581 RRAGBQ5VZM2 374 aa13.97□□□□□ -0.17
LINC00959-201ENST00000456581 UPF1Q92900 1129 aaKnown RBP eCLIP13.97□□□□□ -0.17
LINC00959-201ENST00000456581 VPS18Q9P253 973 aa13.97□□□□□ -0.17
LINC00959-201ENST00000456581 FEZ2Q9UHY8 353 aaPredicted RBP13.97□□□□□ -0.17
LINC00959-201ENST00000456581 DACH1Q9UI36 760 aa13.97□□□□□ -0.17
LINC00959-201ENST00000456581 PP2D1A8MPX8 630 aa13.96□□□□□ -0.17
LINC00959-201ENST00000456581 PES1O00541 588 aaKnown RBP13.96□□□□□ -0.17
LINC00959-201ENST00000456581 PBX1P40424 430 aa13.96□□□□□ -0.17
LINC00959-201ENST00000456581 VSNL1P62760 191 aa13.96□□□□□ -0.17
LINC00959-201ENST00000456581 MRPS25P82663 173 aaKnown RBP13.96□□□□□ -0.17
LINC00959-201ENST00000456581 DHX8Q14562 1220 aaKnown RBP13.96□□□□□ -0.17
LINC00959-201ENST00000456581 CDKAL1Q5VV42 579 aa13.96□□□□□ -0.17
LINC00959-201ENST00000456581 TMC4Q7Z404 712 aa13.96□□□□□ -0.17
LINC00959-201ENST00000456581 SLF2Q8IX21 1173 aa13.96□□□□□ -0.17
LINC00959-201ENST00000456581 BLIDQ8IZY5 108 aa13.96□□□□□ -0.17
LINC00959-201ENST00000456581 RABGGTAQ92696 567 aa13.96□□□□□ -0.17
LINC00959-201ENST00000456581 TCP11L1Q9NUJ3 509 aa13.96□□□□□ -0.17
LINC00959-201ENST00000456581 N4BP3O15049 544 aa13.96□□□□□ -0.17
LINC00959-201ENST00000456581 NKRFO15226 690 aaKnown RBP eCLIP13.96□□□□□ -0.17
LINC00959-201ENST00000456581 INF2Q27J81 1249 aa13.96□□□□□ -0.17
LINC00959-201ENST00000456581 C10orf67Q8IYJ2 551 aa13.96□□□□□ -0.17
LINC00959-201ENST00000456581 CALCOCO1Q9P1Z2 691 aa13.96□□□□□ -0.17
LINC00959-201ENST00000456581 KIF5CO60282 957 aa13.96□□□□□ -0.18
LINC00959-201ENST00000456581 SRGAP2O75044 1071 aa13.96□□□□□ -0.18
LINC00959-201ENST00000456581 ERCC5P28715 1186 aaPredicted RBP13.96□□□□□ -0.18
LINC00959-201ENST00000456581 RBM5P52756 815 aaKnown RBP eCLIP13.96□□□□□ -0.18
LINC00959-201ENST00000456581 ATP2B2Q01814 1243 aa13.96□□□□□ -0.18
LINC00959-201ENST00000456581 AOC3Q16853 763 aa13.96□□□□□ -0.18
LINC00959-201ENST00000456581 SRGAP1Q7Z6B7 1085 aa13.96□□□□□ -0.18
LINC00959-201ENST00000456581 ZNF579Q8NAF0 562 aaKnown RBP13.96□□□□□ -0.18
LINC00959-201ENST00000456581 PANX2Q96RD6 677 aa13.96□□□□□ -0.18
LINC00959-201ENST00000456581 NUP88Q99567 741 aaPredicted RBP13.96□□□□□ -0.18
LINC00959-201ENST00000456581 NRXN2Q9P2S2 1712 aa13.95□□□□□ -0.18
LINC00959-201ENST00000456581 H0YIN7 160 aa13.95□□□□□ -0.18
LINC00959-201ENST00000456581 GABPAQ06546 454 aa13.95□□□□□ -0.18
LINC00959-201ENST00000456581 ZSCAN26Q16670 478 aa13.95□□□□□ -0.18
LINC00959-201ENST00000456581 KCTD19Q17RG1 926 aaPredicted RBP13.95□□□□□ -0.18
LINC00959-201ENST00000456581 BEND6Q5SZJ8 279 aaPredicted RBP13.95□□□□□ -0.18
LINC00959-201ENST00000456581 SH3RF1Q7Z6J0 888 aa13.95□□□□□ -0.18
LINC00959-201ENST00000456581 CERS3Q8IU89 383 aa13.95□□□□□ -0.18
LINC00959-201ENST00000456581 RIN2Q8WYP3 895 aaPredicted RBP13.95□□□□□ -0.18
LINC00959-201ENST00000456581 PIGSQ96S52 555 aa13.95□□□□□ -0.18
LINC00959-201ENST00000456581 FAN1Q9Y2M0 1017 aa13.95□□□□□ -0.18
LINC00959-201ENST00000456581 GOLGA6L9A6NEM1 432 aa13.95□□□□□ -0.18
LINC00959-201ENST00000456581 STXBP3O00186 592 aa13.95□□□□□ -0.18
LINC00959-201ENST00000456581 PARP1P09874 1014 aaKnown RBP13.95□□□□□ -0.18
LINC00959-201ENST00000456581 CRKP46108 304 aa13.95□□□□□ -0.18
LINC00959-201ENST00000456581 PMS1P54277 932 aaKnown RBP13.95□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms