RNA–Protein interactions for RNA: ENST00000456563.1

FAM239A-203, Transcript of family with sequence similarity 239 member A, humanhuman

TSL 3

Gene FAM239A, Length 793 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM239A-203ENST00000456563 ACAD9Q9H845 621 aa20.66■□□□□ 0.9
FAM239A-203ENST00000456563 PCDHA1Q9Y5I3 950 aa20.66■□□□□ 0.9
FAM239A-203ENST00000456563 BAZ2BQ9UIF8 2168 aaKnown RBP20.65■□□□□ 0.9
FAM239A-203ENST00000456563 TAL1P17542 331 aaPredicted RBP20.65■□□□□ 0.9
FAM239A-203ENST00000456563 PTPREP23469 700 aa20.65■□□□□ 0.9
FAM239A-203ENST00000456563 PFKFB3Q16875 520 aaPredicted RBP20.65■□□□□ 0.9
FAM239A-203ENST00000456563 MUM1L1Q5H9M0 696 aa20.65■□□□□ 0.9
FAM239A-203ENST00000456563 WDR78Q5VTH9 848 aa20.65■□□□□ 0.9
FAM239A-203ENST00000456563 CCDC83Q8IWF9 413 aa20.65■□□□□ 0.9
FAM239A-203ENST00000456563 TRIM22Q8IYM9 498 aa20.65■□□□□ 0.9
FAM239A-203ENST00000456563 CLEC4DQ8WXI8 215 aa20.65■□□□□ 0.9
FAM239A-203ENST00000456563 COA7Q96BR5 231 aa20.65■□□□□ 0.9
FAM239A-203ENST00000456563 SLC26A6Q9BXS9 759 aa20.65■□□□□ 0.9
FAM239A-203ENST00000456563 MAF1Q9H063 256 aa20.65■□□□□ 0.9
FAM239A-203ENST00000456563 CWC22Q9HCG8 908 aaKnown RBP20.65■□□□□ 0.9
FAM239A-203ENST00000456563 HOMER2Q9NSB8 354 aa20.65■□□□□ 0.9
FAM239A-203ENST00000456563 MRPL11Q9Y3B7 192 aaKnown RBP20.65■□□□□ 0.9
FAM239A-203ENST00000456563 STK36Q9NRP7 1315 aa20.64■□□□□ 0.89
FAM239A-203ENST00000456563 SLC15A5A6NIM6 579 aa20.64■□□□□ 0.89
FAM239A-203ENST00000456563 hCG_1984214I3L0E3 225 aa20.64■□□□□ 0.89
FAM239A-203ENST00000456563 FCER1AP12319 257 aa20.64■□□□□ 0.89
FAM239A-203ENST00000456563 PKN1Q16512 942 aa20.64■□□□□ 0.89
FAM239A-203ENST00000456563 ZNF713Q8N859 430 aaPredicted RBP20.64■□□□□ 0.89
FAM239A-203ENST00000456563 NSUN7Q8NE18 718 aaKnown RBP20.64■□□□□ 0.89
FAM239A-203ENST00000456563 LLPHQ9BRT6 129 aaKnown RBP20.64■□□□□ 0.89
FAM239A-203ENST00000456563 PRDM10Q9NQV6 1147 aa20.64■□□□□ 0.89
FAM239A-203ENST00000456563 IVNS1ABPQ9Y6Y0 642 aa20.64■□□□□ 0.89
FAM239A-203ENST00000456563 ECM2O94769 699 aaPredicted RBP20.63■□□□□ 0.89
FAM239A-203ENST00000456563 SCG2P13521 617 aa20.63■□□□□ 0.89
FAM239A-203ENST00000456563 HOXD10P28358 340 aa20.63■□□□□ 0.89
FAM239A-203ENST00000456563 GRB14Q14449 540 aa20.63■□□□□ 0.89
FAM239A-203ENST00000456563 MORN1Q5T089 497 aa20.63■□□□□ 0.89
FAM239A-203ENST00000456563 RGS22Q8NE09 1264 aa20.63■□□□□ 0.89
FAM239A-203ENST00000456563 MMP19Q99542 508 aa20.63■□□□□ 0.89
FAM239A-203ENST00000456563 GJD2Q9UKL4 321 aa20.63■□□□□ 0.89
FAM239A-203ENST00000456563 NFIBO00712 420 aa20.62■□□□□ 0.89
FAM239A-203ENST00000456563 PPFIA3O75145 1194 aa20.62■□□□□ 0.89
FAM239A-203ENST00000456563 DEXIO95424 95 aa20.62■□□□□ 0.89
FAM239A-203ENST00000456563 KCTD2Q14681 263 aa20.62■□□□□ 0.89
FAM239A-203ENST00000456563 WWC2Q6AWC2 1192 aa20.62■□□□□ 0.89
FAM239A-203ENST00000456563 OTOP1Q7RTM1 612 aa20.62■□□□□ 0.89
FAM239A-203ENST00000456563 HEATR3Q7Z4Q2 680 aa20.62■□□□□ 0.89
FAM239A-203ENST00000456563 SOCS4Q8WXH5 440 aa20.62■□□□□ 0.89
FAM239A-203ENST00000456563 USP6NLQ92738 828 aa20.62■□□□□ 0.89
FAM239A-203ENST00000456563 NUDT12Q9BQG2 462 aa20.62■□□□□ 0.89
FAM239A-203ENST00000456563 A1CFQ9NQ94 594 aaKnown RBP20.62■□□□□ 0.89
FAM239A-203ENST00000456563 SRRDQ9UH36 339 aa20.62■□□□□ 0.89
FAM239A-203ENST00000456563 PTPDC1A2A3K4 754 aa20.61■□□□□ 0.89
FAM239A-203ENST00000456563 K7ELQ4 463 aaPredicted RBP20.61■□□□□ 0.89
FAM239A-203ENST00000456563 PRMT2P55345 433 aa20.61■□□□□ 0.89
FAM239A-203ENST00000456563 MCF2L2Q86YR7 1114 aa20.61■□□□□ 0.89
FAM239A-203ENST00000456563 ANKRD35Q8N283 1001 aa20.61■□□□□ 0.89
FAM239A-203ENST00000456563 SAMD3Q8N6K7 520 aa20.61■□□□□ 0.89
FAM239A-203ENST00000456563 SMARCC2Q8TAQ2 1214 aa20.61■□□□□ 0.89
FAM239A-203ENST00000456563 GPKOWQ92917 476 aaPredicted RBP eCLIP20.61■□□□□ 0.89
FAM239A-203ENST00000456563 BARHL2Q9NY43 387 aa20.61■□□□□ 0.89
FAM239A-203ENST00000456563 ORC3Q9UBD5 711 aaPredicted RBP20.61■□□□□ 0.89
FAM239A-203ENST00000456563 MGAMO43451 1857 aa20.6■□□□□ 0.89
FAM239A-203ENST00000456563 ZSWIM8A7E2V4 1837 aa20.6■□□□□ 0.89
FAM239A-203ENST00000456563 PFASO15067 1338 aa20.6■□□□□ 0.89
FAM239A-203ENST00000456563 STXBP3O00186 592 aa20.6■□□□□ 0.89
FAM239A-203ENST00000456563 OPLAHO14841 1288 aa20.6■□□□□ 0.89
FAM239A-203ENST00000456563 FDPSP14324 419 aaKnown RBP20.6■□□□□ 0.89
FAM239A-203ENST00000456563 ADORA2AP29274 412 aa20.6■□□□□ 0.89
FAM239A-203ENST00000456563 GHRHRQ02643 423 aa20.6■□□□□ 0.89
FAM239A-203ENST00000456563 MAP2K5Q13163 448 aa20.6■□□□□ 0.89
FAM239A-203ENST00000456563 CUL4AQ13619 759 aa20.6■□□□□ 0.89
FAM239A-203ENST00000456563 PPP1R18Q6NYC8 613 aa20.6■□□□□ 0.89
FAM239A-203ENST00000456563 GABRQQ9UN88 632 aa20.6■□□□□ 0.89
FAM239A-203ENST00000456563 TRIM17Q9Y577 477 aa20.6■□□□□ 0.89
FAM239A-203ENST00000456563 MYH6P13533 1939 aa20.6■□□□□ 0.89
FAM239A-203ENST00000456563 SMCHD1A6NHR9 2005 aa20.6■□□□□ 0.89
FAM239A-203ENST00000456563 DNAJC25-GNG10A0A024R161 153 aa20.59■□□□□ 0.89
FAM239A-203ENST00000456563 JAK2O60674 1132 aa20.59■□□□□ 0.89
FAM239A-203ENST00000456563 FLT3LGP49771 235 aa20.59■□□□□ 0.89
FAM239A-203ENST00000456563 PRKCZQ05513 592 aa20.59■□□□□ 0.89
FAM239A-203ENST00000456563 TYW1BQ6NUM6 668 aa20.59■□□□□ 0.89
FAM239A-203ENST00000456563 NSMFQ6X4W1 530 aa20.59■□□□□ 0.89
FAM239A-203ENST00000456563 CTU1Q7Z7A3 348 aaKnown RBP20.59■□□□□ 0.89
FAM239A-203ENST00000456563 WASF1Q92558 559 aa20.59■□□□□ 0.89
FAM239A-203ENST00000456563 DDX11Q96FC9 970 aa20.59■□□□□ 0.89
FAM239A-203ENST00000456563 MAP3K20Q9NYL2 800 aaKnown RBP20.59■□□□□ 0.89
FAM239A-203ENST00000456563 CYP39A1Q9NYL5 469 aa20.59■□□□□ 0.89
FAM239A-203ENST00000456563 ZNF236Q9UL36 1845 aa20.58■□□□□ 0.89
FAM239A-203ENST00000456563 CASP8AP2Q9UKL3 1982 aa20.58■□□□□ 0.89
FAM239A-203ENST00000456563 HOXC6P09630 235 aa20.58■□□□□ 0.89
FAM239A-203ENST00000456563 RGS2P41220 211 aa20.58■□□□□ 0.89
FAM239A-203ENST00000456563 NAPAP54920 295 aa20.58■□□□□ 0.89
FAM239A-203ENST00000456563 HMGN5P82970 282 aaKnown RBP20.58■□□□□ 0.89
FAM239A-203ENST00000456563 IRF5Q13568 498 aa20.58■□□□□ 0.89
FAM239A-203ENST00000456563 BAATQ14032 418 aaPredicted RBP20.58■□□□□ 0.89
FAM239A-203ENST00000456563 RNF207Q6ZRF8 634 aa20.58■□□□□ 0.89
FAM239A-203ENST00000456563 TEX2Q8IWB9 1127 aa20.58■□□□□ 0.89
FAM239A-203ENST00000456563 HSCBQ8IWL3 235 aa20.58■□□□□ 0.89
FAM239A-203ENST00000456563 FAM177A1Q8N128 213 aaPredicted RBP20.58■□□□□ 0.89
FAM239A-203ENST00000456563 CCDC12Q8WUD4 166 aaPredicted RBP20.58■□□□□ 0.89
FAM239A-203ENST00000456563 TBC1D5Q92609 795 aa20.58■□□□□ 0.89
FAM239A-203ENST00000456563 SH3GLB2Q9NR46 395 aa20.58■□□□□ 0.89
FAM239A-203ENST00000456563 ESYT2A0FGR8 921 aa20.57■□□□□ 0.88
FAM239A-203ENST00000456563 DTNBO60941 627 aa20.57■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms