RNA–Protein interactions for RNA: ENST00000456174.6

HDAC9-218, Transcript of histone deacetylase 9, humanhuman

TSL 2 BASIC

Gene HDAC9, Length 2,307 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-218ENST00000456174 FAM205AQ6ZU69 1335 aa8.54□□□□□ -1.04
HDAC9-218ENST00000456174 GOLGA8AA7E2F4 631 aa8.53□□□□□ -1.04
HDAC9-218ENST00000456174 EIF3HO15372 352 aaKnown RBP eCLIP8.53□□□□□ -1.04
HDAC9-218ENST00000456174 MEFVO15553 781 aaPredicted RBP8.53□□□□□ -1.04
HDAC9-218ENST00000456174 RANBP6O60518 1105 aaKnown RBP8.53□□□□□ -1.04
HDAC9-218ENST00000456174 CUTAO60888 179 aa8.53□□□□□ -1.04
HDAC9-218ENST00000456174 NR1I2O75469 434 aa8.53□□□□□ -1.04
HDAC9-218ENST00000456174 PRDM1O75626 825 aa8.53□□□□□ -1.04
HDAC9-218ENST00000456174 CDKL5O76039 1030 aa8.53□□□□□ -1.04
HDAC9-218ENST00000456174 FESP07332 822 aa8.53□□□□□ -1.04
HDAC9-218ENST00000456174 SLC3A2P08195 630 aaKnown RBP8.53□□□□□ -1.04
HDAC9-218ENST00000456174 CDC27P30260 824 aa8.53□□□□□ -1.04
HDAC9-218ENST00000456174 GTF2IP78347 998 aa8.53□□□□□ -1.04
HDAC9-218ENST00000456174 PPFIA1Q13136 1202 aa8.53□□□□□ -1.04
HDAC9-218ENST00000456174 TUBB2AQ13885 445 aa8.53□□□□□ -1.04
HDAC9-218ENST00000456174 NAA25Q14CX7 972 aa8.53□□□□□ -1.04
HDAC9-218ENST00000456174 TMC6Q7Z403 805 aa8.53□□□□□ -1.04
HDAC9-218ENST00000456174 ZNF526Q8TF50 670 aaPredicted RBP8.53□□□□□ -1.04
HDAC9-218ENST00000456174 HOOK2Q96ED9 719 aa8.53□□□□□ -1.04
HDAC9-218ENST00000456174 WDR24Q96S15 920 aa8.53□□□□□ -1.04
HDAC9-218ENST00000456174 TUBB2BQ9BVA1 445 aa8.53□□□□□ -1.04
HDAC9-218ENST00000456174 ANO10Q9NW15 660 aa8.53□□□□□ -1.04
HDAC9-218ENST00000456174 MCM9Q9NXL9 1143 aa8.53□□□□□ -1.04
HDAC9-218ENST00000456174 LMCD1Q9NZU5 365 aa8.53□□□□□ -1.04
HDAC9-218ENST00000456174 ZNF232Q9UNY5 417 aa8.53□□□□□ -1.04
HDAC9-218ENST00000456174 GRIN2DO15399 1336 aa8.53□□□□□ -1.04
HDAC9-218ENST00000456174 MYH6P13533 1939 aa8.53□□□□□ -1.04
HDAC9-218ENST00000456174 MYH1P12882 1939 aa8.53□□□□□ -1.04
HDAC9-218ENST00000456174 FOCADQ5VW36 1801 aa8.53□□□□□ -1.04
HDAC9-218ENST00000456174 ZC3H4Q9UPT8 1303 aaKnown RBP8.53□□□□□ -1.04
HDAC9-218ENST00000456174 LRRIQ3A6PVS8 624 aaPredicted RBP8.53□□□□□ -1.04
HDAC9-218ENST00000456174 KIAA0754O94854 1291 aa8.53□□□□□ -1.04
HDAC9-218ENST00000456174 USP17L8P0C7I0 530 aa8.53□□□□□ -1.04
HDAC9-218ENST00000456174 CYP2D6P10635 497 aa8.53□□□□□ -1.04
HDAC9-218ENST00000456174 CHRNA5P30532 468 aa8.53□□□□□ -1.04
HDAC9-218ENST00000456174 ATP2B2Q01814 1243 aa8.53□□□□□ -1.04
HDAC9-218ENST00000456174 GUCY1B3Q02153 619 aa8.53□□□□□ -1.04
HDAC9-218ENST00000456174 EVX2Q03828 476 aa8.53□□□□□ -1.04
HDAC9-218ENST00000456174 SNX1Q13596 522 aa8.53□□□□□ -1.04
HDAC9-218ENST00000456174 SNCBQ16143 134 aa8.53□□□□□ -1.04
HDAC9-218ENST00000456174 DEFB132Q7Z7B7 95 aa8.53□□□□□ -1.04
HDAC9-218ENST00000456174 MFN1Q8IWA4 741 aa8.53□□□□□ -1.04
HDAC9-218ENST00000456174 SLF2Q8IX21 1173 aa8.53□□□□□ -1.04
HDAC9-218ENST00000456174 SPDYE1Q8NFV5 336 aaPredicted RBP8.53□□□□□ -1.04
HDAC9-218ENST00000456174 LEO1Q8WVC0 666 aaPredicted RBP8.53□□□□□ -1.04
HDAC9-218ENST00000456174 RTFDC1Q9BY42 306 aaPredicted RBP8.53□□□□□ -1.04
HDAC9-218ENST00000456174 NAT10Q9H0A0 1025 aaKnown RBP8.53□□□□□ -1.04
HDAC9-218ENST00000456174 KAT14Q9H8E8 782 aa8.53□□□□□ -1.04
HDAC9-218ENST00000456174 TNKSO95271 1327 aa8.52□□□□□ -1.05
HDAC9-218ENST00000456174 GPR75-ASB3A0A0A6YYF3 556 aa8.52□□□□□ -1.05
HDAC9-218ENST00000456174 GOLGA6L4A6NEF3 574 aa8.52□□□□□ -1.05
HDAC9-218ENST00000456174 G3V3G9 751 aa8.52□□□□□ -1.05
HDAC9-218ENST00000456174 ORC4O43929 436 aa8.52□□□□□ -1.05
HDAC9-218ENST00000456174 PHACTR2O75167 634 aa8.52□□□□□ -1.05
HDAC9-218ENST00000456174 BTDP43251 543 aa8.52□□□□□ -1.05
HDAC9-218ENST00000456174 PDE4BQ07343 736 aa8.52□□□□□ -1.05
HDAC9-218ENST00000456174 ACTN3Q08043 901 aaPredicted RBP8.52□□□□□ -1.05
HDAC9-218ENST00000456174 DRP2Q13474 957 aa8.52□□□□□ -1.05
HDAC9-218ENST00000456174 DOK7Q18PE1 504 aa8.52□□□□□ -1.05
HDAC9-218ENST00000456174 CCDC40Q4G0X9 1142 aa8.52□□□□□ -1.05
HDAC9-218ENST00000456174 DCAF8Q5TAQ9 597 aa8.52□□□□□ -1.05
HDAC9-218ENST00000456174 CEP57L1Q8IYX8 460 aa8.52□□□□□ -1.05
HDAC9-218ENST00000456174 TGFBRAP1Q8WUH2 860 aa8.52□□□□□ -1.05
HDAC9-218ENST00000456174 PIK3R5Q8WYR1 880 aa8.52□□□□□ -1.05
HDAC9-218ENST00000456174 FBXW7Q969H0 707 aa8.52□□□□□ -1.05
HDAC9-218ENST00000456174 DHX58Q96C10 678 aa8.52□□□□□ -1.05
HDAC9-218ENST00000456174 SPDL1Q96EA4 605 aa8.52□□□□□ -1.05
HDAC9-218ENST00000456174 C8orf76Q96K31 380 aa8.52□□□□□ -1.05
HDAC9-218ENST00000456174 TSPAN18Q96SJ8 248 aa8.52□□□□□ -1.05
HDAC9-218ENST00000456174 ZSCAN10Q96SZ4 725 aaPredicted RBP8.52□□□□□ -1.05
HDAC9-218ENST00000456174 EYA3Q99504 573 aa8.52□□□□□ -1.05
HDAC9-218ENST00000456174 SLX1AQ9BQ83 275 aa8.52□□□□□ -1.05
HDAC9-218ENST00000456174 BPIFA3Q9BQP9 254 aa8.52□□□□□ -1.05
HDAC9-218ENST00000456174 SUGCTQ9HAC7 445 aa8.52□□□□□ -1.05
HDAC9-218ENST00000456174 FAM217BQ9NTX9 383 aaPredicted RBP8.52□□□□□ -1.05
HDAC9-218ENST00000456174 TFIP11Q9UBB9 837 aaKnown RBP8.52□□□□□ -1.05
HDAC9-218ENST00000456174 BLOC1S6Q9UL45 172 aa8.52□□□□□ -1.05
HDAC9-218ENST00000456174 DDX52Q9Y2R4 599 aaKnown RBP eCLIP8.52□□□□□ -1.05
HDAC9-218ENST00000456174 NID2Q14112 1375 aa8.52□□□□□ -1.05
HDAC9-218ENST00000456174 A6NNZ2 444 aa8.52□□□□□ -1.05
HDAC9-218ENST00000456174 SLC8A1P32418 973 aa8.52□□□□□ -1.05
HDAC9-218ENST00000456174 KCNB1Q14721 858 aa8.52□□□□□ -1.05
HDAC9-218ENST00000456174 SEC23AQ15436 765 aa8.52□□□□□ -1.05
HDAC9-218ENST00000456174 NTRK3Q16288 839 aa8.52□□□□□ -1.05
HDAC9-218ENST00000456174 SLC4A8Q2Y0W8 1093 aa8.52□□□□□ -1.05
HDAC9-218ENST00000456174 TUBB8Q3ZCM7 444 aa8.52□□□□□ -1.05
HDAC9-218ENST00000456174 C12orf60Q5U649 245 aa8.52□□□□□ -1.05
HDAC9-218ENST00000456174 SPATA21Q7Z572 469 aa8.52□□□□□ -1.05
HDAC9-218ENST00000456174 IGSF22Q8N9C0 903 aa8.52□□□□□ -1.05
HDAC9-218ENST00000456174 FAM76AQ8TAV0 307 aa8.52□□□□□ -1.05
HDAC9-218ENST00000456174 KCNV2Q8TDN2 545 aa8.52□□□□□ -1.05
HDAC9-218ENST00000456174 CNKSR1Q969H4 720 aa8.52□□□□□ -1.05
HDAC9-218ENST00000456174 SPATA32Q96LK8 384 aa8.52□□□□□ -1.05
HDAC9-218ENST00000456174 PLEKHG4BQ96PX9 1271 aa8.52□□□□□ -1.05
HDAC9-218ENST00000456174 XPO4Q9C0E2 1151 aaKnown RBP8.52□□□□□ -1.05
HDAC9-218ENST00000456174 PDGFDQ9GZP0 370 aaPredicted RBP8.52□□□□□ -1.05
HDAC9-218ENST00000456174 GGA2Q9UJY4 613 aa8.52□□□□□ -1.05
HDAC9-218ENST00000456174 PPP2R2CQ9Y2T4 447 aa8.52□□□□□ -1.05
HDAC9-218ENST00000456174 SKAP2O75563 359 aaPredicted RBP8.51□□□□□ -1.05
HDAC9-218ENST00000456174 PYGLP06737 847 aa8.51□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms